Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000125-TA|BGIBMGA000125-PA|IPR013520|Exonuclease, RNase
T and DNA polymerase III, IPR006055|Exonuclease,
IPR012337|Polynucleotidyl transferase, Ribonuclease H fold
(300 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1985| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 4e-19
SB_56545| Best HMM Match : Exonuc_X-T (HMM E-Value=1.2e-09) 40 0.002
SB_50886| Best HMM Match : Nop10p (HMM E-Value=5.4) 40 0.002
SB_49723| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_45523| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_50683| Best HMM Match : Nop10p (HMM E-Value=2.6) 40 0.002
SB_21765| Best HMM Match : Exonuc_X-T (HMM E-Value=1.9e-09) 39 0.004
SB_15216| Best HMM Match : Exonuc_X-T (HMM E-Value=1.9e-09) 39 0.004
SB_22720| Best HMM Match : KID (HMM E-Value=0.0014) 36 0.040
SB_29903| Best HMM Match : SAP (HMM E-Value=2.2e-11) 35 0.093
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 33 0.38
SB_2816| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_2835| Best HMM Match : Spectrin (HMM E-Value=0.14) 32 0.50
SB_2793| Best HMM Match : UBX (HMM E-Value=0.32) 32 0.50
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.66
SB_23683| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.66
SB_23845| Best HMM Match : IL6 (HMM E-Value=1.2) 31 0.87
SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42) 31 0.87
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 30 2.0
SB_30869| Best HMM Match : DUF164 (HMM E-Value=0.18) 30 2.0
SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33) 30 2.0
SB_19938| Best HMM Match : TolA (HMM E-Value=0.22) 30 2.7
SB_10638| Best HMM Match : Myosin_N (HMM E-Value=1.5e-06) 30 2.7
SB_47530| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_34970| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_25160| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_4014| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_52452| Best HMM Match : Borrelia_orfA (HMM E-Value=1.3) 29 3.5
SB_58942| Best HMM Match : Transposase_23 (HMM E-Value=4.9) 29 4.6
SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_39770| Best HMM Match : TolA (HMM E-Value=0.33) 29 4.6
SB_42841| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011) 29 4.6
SB_11898| Best HMM Match : DMP1 (HMM E-Value=1.6) 29 4.6
SB_57710| Best HMM Match : bZIP_1 (HMM E-Value=0.32) 29 6.1
SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 29 6.1
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 29 6.1
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 6.1
SB_39766| Best HMM Match : RVT_1 (HMM E-Value=1.8e-07) 28 8.1
SB_12146| Best HMM Match : ICA69 (HMM E-Value=5.2) 28 8.1
SB_6581| Best HMM Match : HEAT (HMM E-Value=3e-05) 28 8.1
SB_5722| Best HMM Match : Ion_trans (HMM E-Value=0) 28 8.1
>SB_1985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 343
Score = 92.3 bits (219), Expect = 4e-19
Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 9/143 (6%)
Query: 6 TYVFFDIETTGLPFQERNKTKITELCFLAVSRDDL--DIQSGLPP--IKKLSFVLNPEKK 61
T++F D+ETTGL R +ITE+C +AV +D L ++ P I KLS + P +
Sbjct: 81 TFIFLDLETTGL----RRPIEITEICLIAVQKDHLLRAAETKTEPRLIDKLSICVKPVQN 136
Query: 62 IHPDVVVLTGLTNESLKNAPTFKQR-ANAIVSFLNELPKPICLVAHNGNSFDYKILLAEC 120
I +TG+ L F ++ A I +FL P P CLVAH+G+ FD+ IL +E
Sbjct: 137 IECGASSITGINKMDLAEKREFDRKLAKVIKTFLRRQPSPSCLVAHSGDRFDFDILASEF 196
Query: 121 NDAGILLPSDLLCIDSLIGFRKI 143
+AG+ PS++ DS FRK+
Sbjct: 197 VNAGVKFPSEIQAADSWKAFRKL 219
Score = 32.7 bits (71), Expect = 0.38
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 237 TKKREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRD 278
T + F+L LYKR+ + N+H AE D + L++ L D
Sbjct: 242 TGRLSFSLGNLYKRMTGSEIENSHTAEGDTLALLQLALKKPD 283
>SB_56545| Best HMM Match : Exonuc_X-T (HMM E-Value=1.2e-09)
Length = 416
Score = 40.3 bits (90), Expect = 0.002
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 6 TYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLDIQSGLPPIKKL-SFVLNP----EK 60
T+V FD ETTGL + + I +L + + D L + P + + S N E
Sbjct: 110 TFVMFDTETTGL---DTSNDVIIQLACASENGDPLHSRYMFPGGRSIGSEATNAHGISEA 166
Query: 61 KIHPDVVVLTGLTNESLKNAPTFKQRANAIVSFL----NELPKPICLVAHNGNSFDYKIL 116
I V+L L + + K ++FL ++ PK +CLVAHNG+ FD+ +L
Sbjct: 167 FIDGSRVLLKD--GRPLADVASQKDGLRKFLAFLKMHQSQSPKRLCLVAHNGDRFDFPLL 224
Query: 117 LAECNDAGILLPSDLLCIDSLIGFRKILKTTQKSLPLKMNTS-KDDSASEL 166
+ C L+ + L+ K+++ ++K +++ K +S S+L
Sbjct: 225 I-NCLKRHNLMNEFISTGSVLLDSLKVIRASKKQENSPLDSPFKKESLSDL 274
>SB_50886| Best HMM Match : Nop10p (HMM E-Value=5.4)
Length = 201
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 8/76 (10%)
Query: 95 NELPKPICLVAHNGNSFDYKIL---LAECNDAGILLPSDLLCIDSLIGFRKILKTTQKSL 151
++ PK +CLVAHNG+SFD+++L L N + + L+ +DS+ K+++ ++K
Sbjct: 4 SQSPKRLCLVAHNGDSFDFRLLINCLKRHNLMNEFISTGLVLLDSV----KVIRASKKQE 59
Query: 152 PLKMNTS-KDDSASEL 166
+++S K +S S L
Sbjct: 60 NSPLDSSFKKESLSAL 75
>SB_49723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 40.3 bits (90), Expect = 0.002
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 16/171 (9%)
Query: 6 TYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLDIQSGLPPIKKL-SFVLNP----EK 60
T+V FD ETTGL + + I +L + + D L + P + + S N E
Sbjct: 18 TFVMFDTETTGL---DTSNDVIIQLACASENGDPLHSRYMFPGGRSIGSEATNAHGISEA 74
Query: 61 KIHPDVVVLTGLTNESLKNAPTFKQRANAIVSFL----NELPKPICLVAHNGNSFDYKIL 116
I V+L L + + K ++FL ++ PK +CLVAHNG+ FD+ +L
Sbjct: 75 FIDGSRVLLKD--GRPLADVASQKDGLRKFLAFLKMHQSQSPKRLCLVAHNGDRFDFPLL 132
Query: 117 LAECNDAGILLPSDLLCIDSLIGFRKILKTTQKSLPLKMNTS-KDDSASEL 166
+ C L+ + L+ K+++ ++K +++ K +S S+L
Sbjct: 133 I-NCLKRHNLMNEFISTGSVLLDSLKVIRASKKQENSPLDSPFKKESLSDL 182
>SB_45523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 8/76 (10%)
Query: 95 NELPKPICLVAHNGNSFDYKIL---LAECNDAGILLPSDLLCIDSLIGFRKILKTTQKSL 151
++ PK +CLVAHNG+SFD+++L L N + + L+ +DS+ K+++ ++K
Sbjct: 4 SQSPKRLCLVAHNGDSFDFRLLINCLKRHNLMNEFISTGLVLLDSV----KVIRASKKQE 59
Query: 152 PLKMNTS-KDDSASEL 166
+++S K +S S L
Sbjct: 60 NSPLDSSFKKESLSAL 75
>SB_50683| Best HMM Match : Nop10p (HMM E-Value=2.6)
Length = 201
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 95 NELPKPICLVAHNGNSFDYKIL---LAECNDAGILLPSDLLCIDSLIGFRKILKTTQKSL 151
++ PK +CLVAHNG+SFD+++L L N + + L+ +DS+ R K Q++
Sbjct: 4 SQSPKRLCLVAHNGDSFDFRLLINCLKRHNLMNEFISTGLVLLDSVKVIRASKK--QENS 61
Query: 152 PLKMNTSKD 160
PL + K+
Sbjct: 62 PLDSSFKKE 70
>SB_21765| Best HMM Match : Exonuc_X-T (HMM E-Value=1.9e-09)
Length = 460
Score = 39.1 bits (87), Expect = 0.004
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 6 TYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLDIQSGLP--PIKKLSFVLNPEKKIH 63
T V FD ETTGL + + I +L + + D L + P I + ++ K
Sbjct: 155 TSVMFDTETTGL---DTSNDDIIQLACASENGDPLHSRYMFPRGSIDLGATRVHGISKAF 211
Query: 64 PDVVVLTGLTNESLKNAPTFKQRANAIVSFL----NELPKPICLVAHNGNSFDYKILLAE 119
D + L + + K ++FL ++ PK +CLVAH G+SFD+++L+
Sbjct: 212 IDGSRVLVKDGRPLADVASQKDGLREFIAFLKMHQSQSPKRLCLVAHYGDSFDFRLLI-N 270
Query: 120 CNDAGILLPSDLLCIDSLIGFRKILKTTQKSLPLKMNTS-KDDSASEL 166
C L+ + L+ K+++ ++K ++S K +S S L
Sbjct: 271 CLKRHNLMNEFISTGSVLLDSVKVVRASKKQEKSPFDSSFKKESLSAL 318
>SB_15216| Best HMM Match : Exonuc_X-T (HMM E-Value=1.9e-09)
Length = 415
Score = 39.1 bits (87), Expect = 0.004
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 6 TYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLDIQSGLP--PIKKLSFVLNPEKKIH 63
T V FD ETTGL + + I +L + + D L + P I + ++ K
Sbjct: 110 TSVMFDTETTGL---DTSNDDIIQLACASENGDPLHSRYMFPRGSIDLGATRVHGISKAF 166
Query: 64 PDVVVLTGLTNESLKNAPTFKQRANAIVSFL----NELPKPICLVAHNGNSFDYKILLAE 119
D + L + + K ++FL ++ PK +CLVAH G+SFD+++L+
Sbjct: 167 IDGSRVLVKDGRPLADVASQKDGLREFIAFLKMHQSQSPKRLCLVAHYGDSFDFRLLI-N 225
Query: 120 CNDAGILLPSDLLCIDSLIGFRKILKTTQKSLPLKMNTS-KDDSASEL 166
C L+ + L+ K+++ ++K ++S K +S S L
Sbjct: 226 CLKRHNLMNEFISTGSVLLDSVKVVRASKKQEKSPFDSSFKKESLSAL 273
>SB_22720| Best HMM Match : KID (HMM E-Value=0.0014)
Length = 847
Score = 35.9 bits (79), Expect = 0.040
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 190 KDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYK 249
+D C ++EK K N +K L++ D + +L NKS K R+ + L K
Sbjct: 366 EDVCSENEKLSKNNKQKDEKIQRLQERLDEVQDAVNMNANL---NKSLKNRDEKIKALGK 422
Query: 250 RLLDKDA 256
R+L+ +A
Sbjct: 423 RILEMEA 429
>SB_29903| Best HMM Match : SAP (HMM E-Value=2.2e-11)
Length = 510
Score = 34.7 bits (76), Expect = 0.093
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 187 SFSKDTCIDDEKSKK----ENDLNQQKCTNLKKGRKNKNDLTTQD---QSLSIQNKSTKK 239
S SKD ++ E + EN + QK N K+ K N T + QS S+Q + K
Sbjct: 252 SQSKDGALETETKESNPAAENKRSNQKNANAKRSHKKSNKSTAVNGAKQSGSVQQEHRKP 311
Query: 240 REFTLTGLYKRLLDKDAVNAHRAEDDCVIL 269
E + L K + D+D + + +C +L
Sbjct: 312 SEVVIAELIKAVDDEDKEHVILGDLNCCLL 341
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 32.7 bits (71), Expect = 0.38
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 142 KILKTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEI-DNLCASFSKDTCIDDEKSK 200
K+ T++S L N S + + E L EL ++ E+ D L + + + DE +
Sbjct: 711 KVDLDTERST-LDQNLSLHEQSREKLEQELIIANRERVELGDALNQTTRERDNLHDELVQ 769
Query: 201 KENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTL 244
++ +Q TN+ + K K +LT + SL++Q S+++ L
Sbjct: 770 TRREVERQS-TNVVRLAKEKEELTREKSSLTVQVNSSERENRAL 812
>SB_2816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 32.7 bits (71), Expect = 0.38
Identities = 28/122 (22%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 145 KTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKEN- 203
K+ +KS K N+ + + L E D T N+ E + +++T ++ E ++ N
Sbjct: 37 KSLEKSTEDK-NSKVEQQSDTGLRDESDHGTRNFNEKGGPRETDARETVLEQEHCEERNY 95
Query: 204 DLNQQKCTNLKKGRKNKNDLTTQD-QSLSIQNKSTKKREFTLTGLYKRLLDKDAVNAHRA 262
+ N++ + L + + + +D + I+N++ KR++ G KR+L+++ +N R
Sbjct: 96 EENRKGGSGLLETESKQRHVEPRDLEQERIRNQA--KRDWEKRGSEKRMLERNDLNEERT 153
Query: 263 ED 264
D
Sbjct: 154 LD 155
>SB_2835| Best HMM Match : Spectrin (HMM E-Value=0.14)
Length = 1089
Score = 32.3 bits (70), Expect = 0.50
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 152 PLKMNTSKDDSASEL-LWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKC 210
P + TS+DD SE + E D++TE ++I + S+D ++ E+D+
Sbjct: 62 PCRKLTSEDDITSEDDITSEDDITTE--DDITSEDDITSEDDITSEDNITSEDDITSDDD 119
Query: 211 TNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNAHRAE 263
+ +D+T++D S N +T+ + LLD D V E
Sbjct: 120 ITSDDDITSDDDITSEDDITSEDNITTEPAIKEVIDRANELLDDDYVTESEKE 172
>SB_2793| Best HMM Match : UBX (HMM E-Value=0.32)
Length = 311
Score = 32.3 bits (70), Expect = 0.50
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 155 MNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLK 214
+ TS++D+ SEL+ + E+++ L S D D + ++E +L +Q+ K
Sbjct: 46 LGTSREDNQSELIGTSEERKANFKEQLEQLEESSKIDKEKDRLRLEEEQELTKQEEIRQK 105
Query: 215 KGRKNKNDLTTQDQSLSIQNKSTK----KREFTLTGLYKRLLD 253
+ R+ ++ DQS+ ++ + + KR F L + + D
Sbjct: 106 RRRRVLDEPAPGDQSVEVRIRHPRMGVLKRRFYLRSSVQAVYD 148
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 31.9 bits (69), Expect = 0.66
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 141 RKILKTTQKSLPLKMNTSKDDSASELLWPELDVSTENW---EEIDNLCASFSKDTCIDDE 197
R++ QK++ L+ KDD E+ ++ + E W E I+ L A+ +++E
Sbjct: 3379 RRLENLKQKAIELERQ--KDDELCEVKGDKVSLEKEQWELREAIEELRATLKG---VEEE 3433
Query: 198 KSKKENDL--NQQKCTNLKKGRKNK-------NDLTTQDQSLSIQNKSTKKREFTLTGLY 248
+ + EN+L ++++ + K K+ ND TT+ ++L + K + +
Sbjct: 3434 RDRYENELDDSRKQYPDAKDEIKHNMNISKVLNDRTTEKENLETERKCLLQEK----NRT 3489
Query: 249 KRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADESC 288
+ LLDK AE++ V + +L+ + L SC
Sbjct: 3490 QDLLDKSEQELKAAEENLVKSFQENESLKRQMLKVQSTSC 3529
>SB_23683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 31.9 bits (69), Expect = 0.66
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 14/130 (10%)
Query: 154 KMNTSKDDSASELLWP-ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKEND-LNQQKCT 211
K + D +S+L +L++S E++E +D+ + TC+D K + ND LN +
Sbjct: 5 KEELTNGDLSSDLYQKTDLNISEEDYEALDDKLDQLN--TCLD--KLENWNDSLNSRMRE 60
Query: 212 NLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYK-------RLLDKDAVNAHRAED 264
L+ +K++ T + L + + TK+ T+ R + +D +N R ED
Sbjct: 61 FLEDMQKSRQSQTGEANDLD-EPQFTKEDVLTVVAFILSWQHRQCRCVFRDQLNLSRLED 119
Query: 265 DCVILIECVL 274
IL+ C +
Sbjct: 120 QFQILLSCAI 129
>SB_23845| Best HMM Match : IL6 (HMM E-Value=1.2)
Length = 1388
Score = 31.5 bits (68), Expect = 0.87
Identities = 40/174 (22%), Positives = 67/174 (38%), Gaps = 8/174 (4%)
Query: 128 PSDLLCIDSLIGFRKILKTTQKSLPLK-MNTSKDDSASELLWPELDVSTENWEEIDNLCA 186
P L+ D F K+ T K+L K +N S + SE V +N E L
Sbjct: 476 PKLLIPADKTTNFYKLEPATYKNLLEKEINKSYKKAPSETTH---SVHKKNKEIATKLDL 532
Query: 187 SFSKDTCIDDEKSKKENDLNQQKCTNLKKGR---KNKNDLTTQDQSLSIQNK-STKKREF 242
DT + + +++ TNL +N + +S ++ N KKR F
Sbjct: 533 DDRIDTTANKQAFITLKTISRNSLTNLPADSPTSRNPRSRESAKRSSTVLNSVRAKKRNF 592
Query: 243 TLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADESCKTIHQIKP 296
K ++D A N H+ C ++E ++ + L+ A + +I P
Sbjct: 593 NQWKSTKAVIDWTAENKHQLNFICFDIVEFYPSISQDLLSRALDFASNYDEITP 646
>SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42)
Length = 1712
Score = 31.5 bits (68), Expect = 0.87
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Query: 179 EEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTK 238
E+ + L A + EK K E + + Q ++ K +T S+ +NK +
Sbjct: 87 EKQNRLSAELQAQEKLQIEKLKSEKEKSAQLVNGIESSSKTPAAITESKSSID-KNKQQR 145
Query: 239 KREFTLTGLYKRLLDKDAVNAHRAEDD 265
K + TG K+ +KD + E++
Sbjct: 146 KNQAVATGYGKKRKEKDGNALGKKENE 172
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 196 DEKSKKENDLNQQKCTNLKKGRKNKNDLT-TQDQSLSIQNKSTKKREFTLTGLYKRLLDK 254
DE+++KE D ++K KK + K D + ++ + ++KS K+E K+
Sbjct: 641 DEEAEKEEDKKEEKKEEEKKPDEKKEDESKSEGKKEGDESKSEGKKEEPTADKDKKAEKA 700
Query: 255 DAVNAHRAEDD 265
D A +A DD
Sbjct: 701 DGKEAPKARDD 711
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 5/101 (4%)
Query: 170 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQS 229
+L+ S +N +E+ + ++ +K K NDL Q LK+ K DL +
Sbjct: 779 DLEESKKNEKELRAVIVQLKRENSSTRDKLVKANDLAQTLQDCLKEAHDEKEDLKDSLEE 838
Query: 230 LSIQNKSTKKREFTLTGLYKRLLD-----KDAVNAHRAEDD 265
+ + KK L G K + K + + +A+DD
Sbjct: 839 ANDEKIVAKKHSELLDGRLKEVTQQRDALKTEIESLKADDD 879
>SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 868
Score = 30.3 bits (65), Expect = 2.0
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 14/123 (11%)
Query: 169 PELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQ 228
PEL + + D + A K+ + ++ + + + K T+ G +N N L +D
Sbjct: 694 PELVTESSAASDSDEIDARLKKN----NTEAHSNHSIKKPKPTS--DGHRNNNTLNIKDV 747
Query: 229 SLSIQNKSTKKREFTLTGLYKRLLDKDAVNAHRAEDDCV-ILIECVLALRDEFLTWADES 287
+ Q K +KKRE T LLDK A R + +L E + ++ +L W
Sbjct: 748 KPASQGKPSKKREGT-----SALLDKKPQAAVRYYSGALKLLSEDPIEVQYWYLEWT--I 800
Query: 288 CKT 290
CKT
Sbjct: 801 CKT 803
>SB_30869| Best HMM Match : DUF164 (HMM E-Value=0.18)
Length = 442
Score = 30.3 bits (65), Expect = 2.0
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 116 LLAECN-DAGILLPSDLLCIDSLIGFRKILKTTQKSLPLKMNTSKDDSASELLWPELDVS 174
+L++ N D GI +P L I K TQK LK + D A E W L+ S
Sbjct: 4 ILSDINFDEGIAMPVANTANKQLEAENNIFKNTQKLEDLKAQMNWDQKALE-AW--LEES 60
Query: 175 TENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQN 234
E+ + K T D+ K KE L ++ T+ + G+K KN Q+++ Q
Sbjct: 61 ARKDED----ALTLQKYTRSDEAKI-KELSLQMERMTD-EAGKKRKNLEHELTQTMTAQI 114
Query: 235 KSTKKRE 241
+ K E
Sbjct: 115 ELDKTAE 121
>SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33)
Length = 997
Score = 30.3 bits (65), Expect = 2.0
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 144 LKTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKEN 203
L+T +S+PLK + S+D S LL +DV + ++ +NL AS + D +
Sbjct: 626 LRTGYRSVPLKNSFSEDYEMSSLL-AHIDVRSAKGDD-ENLYASIQG---LRD----RVQ 676
Query: 204 DLNQQKCTNLKKGRKNKNDLTTQDQS-LSIQNKSTK-KREFTLTGLYKRLLDK 254
+++ Q T ++ R+ + L +D LS++ + + K + L K+LL+K
Sbjct: 677 EISSQMQTEEQRAREAMSQLQIRDGGPLSLEAQEYRDKHAHNMASLGKQLLEK 729
>SB_19938| Best HMM Match : TolA (HMM E-Value=0.22)
Length = 2279
Score = 29.9 bits (64), Expect = 2.7
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 158 SKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKKGR 217
SK+D+ + L V T N E +D S + T +K+K++N Q+ T+ ++ R
Sbjct: 1494 SKNDNDANLATDAGVVHTPN-EGVDRELPS-DRTTRPQKKKAKRKN---QRPKTSKRRSR 1548
Query: 218 KNKNDLTTQ--DQSLSIQNKST 237
K+KND + DQ LS+ K +
Sbjct: 1549 KDKNDCPQEENDQELSVIGKES 1570
>SB_10638| Best HMM Match : Myosin_N (HMM E-Value=1.5e-06)
Length = 1977
Score = 29.9 bits (64), Expect = 2.7
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 143 ILKTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASF---SKDTCIDDEKS 199
I T+++ N +DS + PE VS ++ + +DN+C S DTC ++++
Sbjct: 756 IALTSERYNSTNHNKGLNDSLEQEDSPE-GVSPDSVDSLDNMCDSLDDEESDTCEYEKEA 814
Query: 200 KKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGL 247
+N N K+G K D D S++ ++ R+ LT L
Sbjct: 815 VNGQIVNMM---NGKQGEVLKED--NPDSPRSVETADSEPRDSGLTTL 857
>SB_47530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 939
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 168 WPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQD 227
W + V+ EE+ + A + T DE S E+ +N+ + G++++ + +Q
Sbjct: 844 WSTIMVNVTRLEELSQVAAVVAGVTDKRDELSV-ESQVNETAIYPIT-GKRDELSVKSQV 901
Query: 228 QSLSIQNKSTKKREFTLTGLYKRLLDKDAVN 258
LSIQ++ + + +TG L K VN
Sbjct: 902 NELSIQSQVNETAIYPITGKRDELSVKSQVN 932
>SB_34970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/76 (23%), Positives = 36/76 (47%)
Query: 160 DDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKKGRKN 219
D+ S+ ELD S + +I D+ +DD KSK++ + + ++ T + +
Sbjct: 659 DNQISKCKLEELDDSDMDDNQISKCKLEELDDSDMDDNKSKRKPNFSIEEITIITESVAE 718
Query: 220 KNDLTTQDQSLSIQNK 235
K ++ + S+ NK
Sbjct: 719 KKEILNSKLTNSVTNK 734
>SB_25160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/46 (21%), Positives = 28/46 (60%)
Query: 189 SKDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQN 234
+KD+ +++++KK N+ N N +N+N++ + +++++ N
Sbjct: 66 NKDSNNNNDRNKKNNNNNNNSNNNNNNNNRNQNNINSNNKNINSNN 111
>SB_4014| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 145 KTTQKSLPLKMNTSK--DDSAS---ELLWPELDVSTENWEE 180
K K+ P+K N S DD AS E +WP L+V +W E
Sbjct: 24 KQNLKATPMKQNYSNTDDDQASSFVEKVWPLLEVKMNSWIE 64
>SB_52452| Best HMM Match : Borrelia_orfA (HMM E-Value=1.3)
Length = 471
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 195 DDEKSKKENDLNQQKCTNLKKGRKNKN-DLTTQDQSL--SIQNKSTKKR 240
D E K+ D+ +Q+ KKG K ++ D D + ++NKS KKR
Sbjct: 168 DSESDDKDKDIRKQEKKLKKKGGKREDKDCGRDDDEIHGQVKNKSKKKR 216
>SB_58942| Best HMM Match : Transposase_23 (HMM E-Value=4.9)
Length = 76
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 194 IDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNK 235
I D+ SKK D +QK LK G K + + D+ +++K
Sbjct: 4 IQDKISKKREDRKKQKKKLLKNGEKVEEKENSNDEEQQVESK 45
>SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1888
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 172 DVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLS 231
D +T+N + DN S DT D++ + +ND TN ND T+ + + S
Sbjct: 238 DTTTDNNKTTDNDTTS-DNDTTTDNDTTS-DNDTTTNNDTNSDNDTTTSNDTTSDNDTTS 295
Query: 232 IQNKSTKKREFT 243
N +T + T
Sbjct: 296 -DNDTTTNNDTT 306
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Query: 157 TSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKKG 216
+ D +A + + +++N DN S DT D+E + +ND N T
Sbjct: 49 SDNDTTADNNTTSDNNTTSDNDTTSDNDTTS-DNDTTSDNETTS-DNDTNSDNDTTSDND 106
Query: 217 RKNKNDLTTQDQSLSIQNKSTKKREFT 243
+ + ND TT D + N +T T
Sbjct: 107 KTSDND-TTSDNDTTSDNDTTSDNNTT 132
Score = 28.7 bits (61), Expect = 6.1
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 157 TSKDDSASELLWPEL-DVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKK 215
TS +D+ S+ D +++N DN S DT D+E + +ND N T
Sbjct: 120 TSDNDTTSDNNTTSYNDPTSDNDTTSDNDTTS-DNDTTSDNETTS-DNDTNSDNDTTSDN 177
Query: 216 GRKNKNDLTTQDQSLSIQNKSTKKREFT 243
+ ND TT + + S N +T T
Sbjct: 178 DKTTDNDTTTDNDTTS-DNDTTSDNNTT 204
>SB_39770| Best HMM Match : TolA (HMM E-Value=0.33)
Length = 732
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 190 KDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQ-DQSLSIQNKSTKKREFTLTGLY 248
KD I+ + K + +L Q+K ++K K D+ T+ DQ + + TK++ ++ Y
Sbjct: 383 KDAEIEKLQQKNQYELQQKKTELIEKHEKAMEDVLTELDQVQNAELGETKRKMSSVQAKY 442
Query: 249 KRLLD 253
+D
Sbjct: 443 DMTMD 447
>SB_42841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 29.1 bits (62), Expect = 4.6
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 6/105 (5%)
Query: 138 IGFRKILKTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSK--DTCID 195
+G + I+ +TQ +L N ++ +LL PEL+ E L F K T
Sbjct: 75 LGLQGIINSTQDTLQGADNKGREVEKLKLLKPELEKLNTKIENTQALIEKFDKRIQTIRS 134
Query: 196 DEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKR 240
+ K N LN +++ + + LTT+ +SL R
Sbjct: 135 GLELMKSNTLN----NSVRDLERQISSLTTEAKSLQANTSQEMNR 175
>SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011)
Length = 1199
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 196 DEKSKKEND-LNQQKCTNLKKGRKNKNDLT 224
+E + ND +N QKCT + +K KND+T
Sbjct: 475 NEFLESSNDSINSQKCTGDRSDKKEKNDVT 504
>SB_11898| Best HMM Match : DMP1 (HMM E-Value=1.6)
Length = 1705
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 185 CASFSKDTCIDDEKSKKENDLNQQKCTNLKKGRKNKND---LTTQDQSLSIQNKSTKK 239
C SK T DD S+K+ DL+ K + K KN ND + Q Q+ S + K KK
Sbjct: 1491 CRIKSKKT--DDTDSRKQQDLS-AKSSKEPKSSKNSNDGMAVDAQSQNSSKKRKHQKK 1545
>SB_57710| Best HMM Match : bZIP_1 (HMM E-Value=0.32)
Length = 584
Score = 28.7 bits (61), Expect = 6.1
Identities = 29/147 (19%), Positives = 60/147 (40%), Gaps = 5/147 (3%)
Query: 154 KMNTSKDDSASELLWPELDVSTENWEEIDNLCA-SFSKDTC--IDDEKSKKENDLNQQKC 210
+++ K+ EL +D + EE D + +K C ++D+ +++ + + C
Sbjct: 130 RLSNEKNQLCHELEKKSMDAAKMK-EEFDAMATIREAKILCQTLEDDFDEEQLSTSMENC 188
Query: 211 TNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNAHRAEDDCVILI 270
+ K DL + ++ ++ + L + K NA D+CV L
Sbjct: 189 LKINNQLKELVDLKKLVKRYQTKDGKSQAQIRDLKNDLDNMRAKLG-NAQTKADECVFLT 247
Query: 271 ECVLALRDEFLTWADESCKTIHQIKPL 297
V L +E + W +++ + IK L
Sbjct: 248 SRVQQLEEERMNWKNKASEAEEIIKSL 274
>SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1143
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 195 DDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKK-REFTLT 245
D S D + K L K RKN DL Q + K TKK R+++ T
Sbjct: 704 DSFSSSSSEDRRRTKKKKLSKHRKNNKDLELQPIKKVKKRKETKKSRKYSTT 755
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 195 DDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKRE 241
DD+K KKE + ++K K+ + + ++++ + K KK+E
Sbjct: 1887 DDKKEKKEENEEEEKKKKKKENEEEDDKKNNKEENEEDEKKEKKKKE 1933
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/55 (25%), Positives = 29/55 (52%)
Query: 196 DEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKR 250
DE ++KE +L +++ N +++ + +S +K T+KR+ T+ L R
Sbjct: 105 DEPTEKEEELRKERQENEWLQEESQQTRLESHEYMSYMSKKTQKRQTTIISLSDR 159
>SB_39766| Best HMM Match : RVT_1 (HMM E-Value=1.8e-07)
Length = 392
Score = 28.3 bits (60), Expect = 8.1
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 196 DEKSKKEN--DLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKRLLD 253
D+K KEN + C N + L T SL N S +++++ L +
Sbjct: 149 DDKLSKENYRPVTILSCVNKVLEKLVSVQLATSFDSLMYVNSSAYRKQYSCETTLINLTE 208
Query: 254 KDAVNAHRAEDDCVILIECVLALR 277
+ A+ A+D C+ L+E L+ R
Sbjct: 209 SK-LKAYGAQDTCLRLLESYLSDR 231
>SB_12146| Best HMM Match : ICA69 (HMM E-Value=5.2)
Length = 232
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 194 IDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFT 243
I + K++ D+N+ +L KGRK ND + + L+++N TKK T
Sbjct: 111 ISGKIDKEQIDVNRM---DLFKGRKKLNDKESDESILTMRNIFTKKDRTT 157
>SB_6581| Best HMM Match : HEAT (HMM E-Value=3e-05)
Length = 1188
Score = 28.3 bits (60), Expect = 8.1
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 227 DQSLSIQNKS----TKKREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLT 282
D+ +QN+S TK T + +RLLD D V+ R++ V + + + L +LT
Sbjct: 1080 DKLQKLQNRSARIITKSNFDTRSATLRRLLDWDDVSTRRSKHLGVAMFKTLNNLFPSYLT 1139
Query: 283 WADESCK----TIHQIK 295
E+C+ TI Q+K
Sbjct: 1140 NLFETCEPNSGTIFQMK 1156
>SB_5722| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1236
Score = 28.3 bits (60), Expect = 8.1
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 132 LCIDSLIGFRKILKTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKD 191
L I L+G +K+ + K P + +D SE++ + + EN +E N +
Sbjct: 265 LQISRLLGRKKVSGSRSKVGP-EDELDSEDENSEMIRQQDEDENENKKEAANTLTNCKSA 323
Query: 192 TCIDDEKSKKENDLNQQKCTNLKKGRKN---KNDLTTQDQSLSIQNKSTK 238
++ + S + ++ N + + G N N Q Q S+ N + K
Sbjct: 324 EAVNQDNSMELSEFNGKVAADNTNGYSNCNSGNPSLAQRQKHSLPNDTNK 373
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.134 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,275,453
Number of Sequences: 59808
Number of extensions: 440245
Number of successful extensions: 1525
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1478
Number of HSP's gapped (non-prelim): 64
length of query: 300
length of database: 16,821,457
effective HSP length: 82
effective length of query: 218
effective length of database: 11,917,201
effective search space: 2597949818
effective search space used: 2597949818
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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