Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000125-TA|BGIBMGA000125-PA|IPR013520|Exonuclease, RNase
T and DNA polymerase III, IPR006055|Exonuclease,
IPR012337|Polynucleotidyl transferase, Ribonuclease H fold
(300 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 38 0.007
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 38 0.007
Z77660-4|CAB01172.1| 501|Caenorhabditis elegans Hypothetical pr... 33 0.25
U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 32 0.43
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 32 0.43
Z49071-3|CAA88875.1| 319|Caenorhabditis elegans Hypothetical pr... 31 0.76
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z81038-15|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 31 1.3
Z81038-14|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 31 1.3
U00040-5|AAA50666.1| 934|Caenorhabditis elegans Hypothetical pr... 31 1.3
U40946-3|AAO91681.1| 851|Caenorhabditis elegans Hypothetical pr... 30 1.7
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 30 1.7
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 30 1.7
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 30 2.3
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 30 2.3
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 30 2.3
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical pr... 29 4.0
U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical p... 29 4.0
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 29 4.0
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 29 4.0
U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr... 29 4.0
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 29 4.0
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 29 4.0
Z81568-2|CAB04590.1| 276|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z68301-9|CAA92628.1| 456|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z68299-8|CAA92615.1| 456|Caenorhabditis elegans Hypothetical pr... 29 5.3
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 29 5.3
Z70309-10|CAA94361.2| 324|Caenorhabditis elegans Hypothetical p... 28 7.1
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 28 7.1
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 28 7.1
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ... 28 7.1
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 28 7.1
AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical ... 28 7.1
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 28 9.3
AF026215-4|AAB71322.1| 843|Caenorhabditis elegans Hypothetical ... 28 9.3
AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical ... 28 9.3
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 38.3 bits (85), Expect = 0.007
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 12/145 (8%)
Query: 141 RKILKT-TQKSLPLKMNTSKDDSASELLWPE-LDVSTENWEEIDNLCASFSKDTCIDDEK 198
+K+LK T+KS + TS D+ PE +++ TE E++ L FS D+ ++ E
Sbjct: 13772 KKVLKKKTEKSDSVISETSSVDTIK----PESVEIPTEKAEQMI-LHNRFSTDSAVESEP 13826
Query: 199 SKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVN 258
D ++ ++ RK+ + +QS+S + S +R TG + D +
Sbjct: 13827 KNAHKDDTEKTTDDMMTRRKSSAIFSDDEQSISSKTSSEGRRRRRRTGFASKFA-SDTL- 13884
Query: 259 AHRAEDDCVILIECVLALRDEFLTW 283
A R ++ + IE L D+ +TW
Sbjct: 13885 ALRGDN---VEIEAELLAEDDTVTW 13906
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 38.3 bits (85), Expect = 0.007
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 12/145 (8%)
Query: 141 RKILKT-TQKSLPLKMNTSKDDSASELLWPE-LDVSTENWEEIDNLCASFSKDTCIDDEK 198
+K+LK T+KS + TS D+ PE +++ TE E++ L FS D+ ++ E
Sbjct: 13772 KKVLKKKTEKSDSVISETSSVDTIK----PESVEIPTEKAEQMI-LHNRFSTDSAVESEP 13826
Query: 199 SKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVN 258
D ++ ++ RK+ + +QS+S + S +R TG + D +
Sbjct: 13827 KNAHKDDTEKTTDDMMTRRKSSAIFSDDEQSISSKTSSEGRRRRRRTGFASKFA-SDTL- 13884
Query: 259 AHRAEDDCVILIECVLALRDEFLTW 283
A R ++ + IE L D+ +TW
Sbjct: 13885 ALRGDN---VEIEAELLAEDDTVTW 13906
>Z77660-4|CAB01172.1| 501|Caenorhabditis elegans Hypothetical
protein F38H4.4 protein.
Length = 501
Score = 33.1 bits (72), Expect = 0.25
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 174 STENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQ 233
+++ ++ D L S SK DEKS D+ +K + K+G+K + +D
Sbjct: 124 ASKETDKDDKLQKSKSKTKL--DEKSDNNKDIKDEKKDDKKEGKKEEKKDEKKDDD---G 178
Query: 234 NKSTKKREFTLTGLYKRLLDKDA 256
N KK+++ GL KR +D+DA
Sbjct: 179 NTEEKKQKW--LGLAKRFVDEDA 199
>U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical
protein F57C12.2 protein.
Length = 556
Score = 33.1 bits (72), Expect = 0.25
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 110 SFDYKILLAECNDAGILLPSDLLCIDSLIGFRKILKTTQKSLPLKMNTSKDDSASELLWP 169
++ K L+ + N+A + + + I L G + LK +++L ++ SE P
Sbjct: 24 NYTQKALIQKYNEANLKVENQKKSITQLHGAIQKLKMEKQNLETQL--------SEKNSP 75
Query: 170 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQS 229
+ TEN ++ T I+++K K+ N LN+ K T LK+ ++N N L+ ++S
Sbjct: 76 KTPNVTENMWSLEYESKLSDAKTKIENQK-KEINKLNE-KVTQLKEEQQNSNQLSKNNES 133
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 32.3 bits (70), Expect = 0.43
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 171 LDVSTENWEEIDNLCASFSKDTCIDDE-KSKKENDLNQQKCTNLKKGRKNKNDLTTQDQS 229
+++STENW + + FSK+ + KS +E + QK + +NK+DL+ Q S
Sbjct: 1 MEISTENWCKKPKNRSIFSKNISFQKQNKSTEEPPSSVQKLLASLQQAQNKSDLSEQ-PS 59
Query: 230 LSIQNKSTKKRE 241
S K+ K+++
Sbjct: 60 TSKPKKNEKRKK 71
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 32.3 bits (70), Expect = 0.43
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 171 LDVSTENWEEIDNLCASFSKDTCIDDE-KSKKENDLNQQKCTNLKKGRKNKNDLTTQDQS 229
+++STENW + + FSK+ + KS +E + QK + +NK+DL+ Q S
Sbjct: 1 MEISTENWCKKPKNRSIFSKNISFQKQNKSTEEPPSSVQKLLASLQQAQNKSDLSEQ-PS 59
Query: 230 LSIQNKSTKKRE 241
S K+ K+++
Sbjct: 60 TSKPKKNEKRKK 71
>Z49071-3|CAA88875.1| 319|Caenorhabditis elegans Hypothetical
protein T22C8.3 protein.
Length = 319
Score = 31.5 bits (68), Expect = 0.76
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 169 PELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQ-KCTNLKKGRKNKNDLTTQD 227
P +D+ ++ EI + + +K I + +K +N ++Q K TN K K+K T+
Sbjct: 15 PVIDLDQDSNMEIAHKIQNQTKRLPISEPANKNKNVTSKQNKETNRKTFEKSKRMATSTI 74
Query: 228 QSLSIQNKSTKKREFTLTGLYKRLLDKDAVNAHRAEDD 265
Q ++ + T+K + + T +L K A E++
Sbjct: 75 QDRVLRTQKTRKDKESTTEKVNAILKKSAKQIKVREEE 112
>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
protein T20F7.5 protein.
Length = 1065
Score = 31.5 bits (68), Expect = 0.76
Identities = 23/92 (25%), Positives = 42/92 (45%)
Query: 147 TQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLN 206
T K K + S D SE P + ++++ +E D + S +C + S +
Sbjct: 777 TVKKEDKKNSNSVDSCRSESSLPNHNQNSDDDDEQDGIGRSGFSSSCSKYQHSVASSSAE 836
Query: 207 QQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTK 238
Q++ NLKK NK + + +S + ++TK
Sbjct: 837 QEELKNLKKKLLNKLNKEKKKRSKKSRFEATK 868
>Z81038-15|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 145 KTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKEND 204
K T K K ++S D S E + + + AS S D DDEK+KK++
Sbjct: 481 KATPKQSAKKADSSDDSSDDEAPAKKTPAKSTPAKTAVKKEASSSSDDSSDDEKTKKKSA 540
Query: 205 LNQQKCTNLKKGRK-NKNDLTTQDQSLSIQNKSTKKR 240
K T +K +D + D+ L +K+ R
Sbjct: 541 TTPAKSTPKTALKKAESSDSSDDDEDLPKPSKAVTPR 577
Score = 28.3 bits (60), Expect = 7.1
Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Query: 141 RKILKTTQKSLPLKMN--TSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEK 198
+ ++K T +P K +S DDS+ + P + + + A S D+ D+
Sbjct: 444 KPVVKQTPNVVPKKEKAASSSDDSSDDEKKPTAKPTPKATPKQSAKKADSSDDSSDDEAP 503
Query: 199 SKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYK 249
+KK + T +KK + +D ++ D+ ++ +T + T L K
Sbjct: 504 AKKTPAKSTPAKTAVKKEASSSSDDSSDDEKTKKKSATTPAKSTPKTALKK 554
>Z81038-14|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 145 KTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKEND 204
K T K K ++S D S E + + + AS S D DDEK+KK++
Sbjct: 756 KATPKQSAKKADSSDDSSDDEAPAKKTPAKSTPAKTAVKKEASSSSDDSSDDEKTKKKSA 815
Query: 205 LNQQKCTNLKKGRK-NKNDLTTQDQSLSIQNKSTKKR 240
K T +K +D + D+ L +K+ R
Sbjct: 816 TTPAKSTPKTALKKAESSDSSDDDEDLPKPSKAVTPR 852
Score = 28.3 bits (60), Expect = 7.1
Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Query: 141 RKILKTTQKSLPLKMN--TSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEK 198
+ ++K T +P K +S DDS+ + P + + + A S D+ D+
Sbjct: 719 KPVVKQTPNVVPKKEKAASSSDDSSDDEKKPTAKPTPKATPKQSAKKADSSDDSSDDEAP 778
Query: 199 SKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYK 249
+KK + T +KK + +D ++ D+ ++ +T + T L K
Sbjct: 779 AKKTPAKSTPAKTAVKKEASSSSDDSSDDEKTKKKSATTPAKSTPKTALKK 829
>U00040-5|AAA50666.1| 934|Caenorhabditis elegans Hypothetical
protein C18H2.4 protein.
Length = 934
Score = 30.7 bits (66), Expect = 1.3
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 18/149 (12%)
Query: 34 AVSRDDL-DIQSGLPPIKKLSFVLNPEKKIHP----DVVV-LTGLTNESLKNAPTFKQRA 87
AVSR+D+ + +G + L +++ + IH D+VV L GL +S T
Sbjct: 113 AVSREDVVKVSNGTEWLNTLKGLVSTFEDIHQINKIDIVVFLNGLYGDSFAKKAT-SCND 171
Query: 88 NAIVSFLNELPKPICLVAHNGNS----------FDYKILLAECNDAGILLPSDLLCIDSL 137
I +FL K I AHN N D + L EC D S + I +
Sbjct: 172 TVIETFLM-FYKVIRSAAHNTNGTLVKESINTFLDLETELFECLDNISSYKSIFIPIVTR 230
Query: 138 IGFRKILKTTQKSLPLKMNTSKDDSASEL 166
+ F L+ T KSL K+ KD++ ++L
Sbjct: 231 LNFFTALEKTIKSLNSKIPNKKDEAVTKL 259
>U40946-3|AAO91681.1| 851|Caenorhabditis elegans Hypothetical
protein W05H9.2 protein.
Length = 851
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 163 ASELLWPELDVSTENWEEIDNLCASFSK-DTCIDDEKSKK 201
A+ELLWP++D ++ +CA S D +D EK K+
Sbjct: 542 AAELLWPKIDGVMFQLNKVPGICAFVSNFDDHVDREKVKE 581
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 180 EIDNLCASFSKDTCIDDEKSKKENDLNQQKCT-NLKKGRKNKNDLTTQDQSLSIQNKSTK 238
++D + + KD D+ S K+ +NQQ T +LKK + +DL ++ + I ++
Sbjct: 48 QLDIMIMAAEKDIATDEVDSVKQALMNQQMITQHLKKRNEYLDDLEEANERIKILDEELD 107
Query: 239 KRE 241
K E
Sbjct: 108 KLE 110
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 180 EIDNLCASFSKDTCIDDEKSKKENDLNQQKCT-NLKKGRKNKNDLTTQDQSLSIQNKSTK 238
++D + + KD D+ S K+ +NQQ T +LKK + +DL ++ + I ++
Sbjct: 48 QLDIMIMAAEKDIATDEVDSVKQALMNQQMITQHLKKRNEYLDDLEEANERIKILDEKLD 107
Query: 239 KRE 241
K E
Sbjct: 108 KLE 110
>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
protein C25F9.2 protein.
Length = 1469
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Query: 103 LVAHNGNSFDYKILLAECN-DAGI 125
+VAHNG S+D+ +LLAE + AGI
Sbjct: 711 IVAHNGGSYDHVMLLAELDRQAGI 734
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 60 KKIHPDVVVLTGLTNESLKNAPTFKQRANAIVSFLNELPKPICLVAHNGNSFDYKILLA- 118
K+IH ++ K +FK R V FLN + I ++ + F YK+ A
Sbjct: 93 KEIHLELKSSKNKYEGLRKKIASFKGRQQKAVGFLNSGLEEIRILTSPNDKFCYKVKNAS 152
Query: 119 -ECN-DAGILLPSDLLCIDSLIGFRKILKTT 147
C+ D I L L + LIG K ++ T
Sbjct: 153 WRCSVDNSIDLQKIKLICEKLIGLEKKMEVT 183
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 192 TCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKR 240
T DDE +++QQ+ T ++ RK + LT + K+ KR
Sbjct: 990 TSSDDEDHNDAGEIHQQRLTEDRENRKRQKSLTAYSSDEQGERKNVPKR 1038
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 192 TCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKR 240
T DDE +++QQ+ T ++ RK + LT + K+ KR
Sbjct: 1281 TSSDDEDHNDAGEIHQQRLTEDRENRKRQKSLTAYSSDEQGERKNVPKR 1329
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 192 TCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKR 240
T DDE +++QQ+ T ++ RK + LT + K+ KR
Sbjct: 1296 TSSDDEDHNDAGEIHQQRLTEDRENRKRQKSLTAYSSDEQGERKNVPKR 1344
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 192 TCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKR 240
T DDE +++QQ+ T ++ RK + LT + K+ KR
Sbjct: 1296 TSSDDEDHNDAGEIHQQRLTEDRENRKRQKSLTAYSSDEQGERKNVPKR 1344
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 192 TCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKR 240
T DDE +++QQ+ T ++ RK + LT + K+ KR
Sbjct: 990 TSSDDEDHNDAGEIHQQRLTEDRENRKRQKSLTAYSSDEQGERKNVPKR 1038
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 192 TCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKR 240
T DDE +++QQ+ T ++ RK + LT + K+ KR
Sbjct: 1281 TSSDDEDHNDAGEIHQQRLTEDRENRKRQKSLTAYSSDEQGERKNVPKR 1329
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 192 TCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKR 240
T DDE +++QQ+ T ++ RK + LT + K+ KR
Sbjct: 1296 TSSDDEDHNDAGEIHQQRLTEDRENRKRQKSLTAYSSDEQGERKNVPKR 1344
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 192 TCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKR 240
T DDE +++QQ+ T ++ RK + LT + K+ KR
Sbjct: 1296 TSSDDEDHNDAGEIHQQRLTEDRENRKRQKSLTAYSSDEQGERKNVPKR 1344
>Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical
protein C06C3.3 protein.
Length = 576
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/41 (29%), Positives = 27/41 (65%)
Query: 199 SKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKK 239
++ ++ +++K N++K ++KND + QD+S I+ K +K
Sbjct: 365 TRNSDETDRRKPENVEKTVESKNDRSVQDKSEKIEKKVPEK 405
>U58755-16|AAB00705.2| 512|Caenorhabditis elegans Hypothetical
protein C34D4.1 protein.
Length = 512
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 197 EKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKS----TKKREFTLTGLYKRLL 252
+ KK +L +K +K K++N+ TTQDQ L K+ ++R ++T + K+L
Sbjct: 312 DHDKKAKELKSKKTQQERK--KSENEKTTQDQKLKEAEKNYEMWKRERSKSVTDIRKKLE 369
Query: 253 DKDAVNAHRAED 264
++ + E+
Sbjct: 370 QEEDKKRKKEEE 381
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 196 DEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKK 239
D+K KK+++ ++K + KK K K+D +D++ ++K KK
Sbjct: 182 DKKKKKDDNDEEEKEKDKKKKDKKKDDDDDEDENDKKKDKKKKK 225
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 197 EKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKRE 241
+K KK++D + + + KK +K K D D++ + K KK++
Sbjct: 201 KKDKKKDDDDDEDENDKKKDKKKKKDDKDDDENEDDKKKDKKKKK 245
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 196 DEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKRE 241
D+K KK++D ++ + K +K K+D +D+ K K++
Sbjct: 278 DKKKKKDDDDDEDEDNKKKDKKKKKDDKDDEDEEKEKDKKKKDKKK 323
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 29.1 bits (62), Expect = 4.0
Identities = 27/130 (20%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 144 LKTTQKSLPLKMNTSKDDSA------SELLWPELDVSTENWEEIDNLCASFSKDTCIDDE 197
L+ +++L +++ +D SA ++LL + D+ + D LC K+ + +
Sbjct: 890 LEAEKQALLIQLEQERDSSAEGEERSAKLLAQKADLEKQMANMNDQLCDEEEKNAALTKQ 949
Query: 198 KSKKENDLNQQKCT--NLKKG-RKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKRLLDK 254
K K E D K T +L+ +K +++ +D + + ++ ++ L K +
Sbjct: 950 KKKIEQDNEGLKKTVSDLETTIKKQESEKQAKDHQIRSLQDEIQSQDEVISKLNKEKKHQ 1009
Query: 255 DAVNAHRAED 264
+ VN ED
Sbjct: 1010 EEVNRKLLED 1019
>U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical
protein W03A3.2 protein.
Length = 1540
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 170 ELDVSTENWEEIDNLCASFSKDTC--IDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQD 227
EL EN E I C S D+C ++DE +KEN + ++ T K+ +++ D
Sbjct: 706 ELPKFEENEENIQESCDSGLPDSCEGMEDELEEKENIVKMEEMT------KSVTEMSLTD 759
Query: 228 QSLSIQNK 235
++S +++
Sbjct: 760 NTISFKSE 767
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/102 (20%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 136 SLIGFRKILKTTQKSLPLKMNTSK------DDSASELLWPELDVSTENWEEIDNLCASFS 189
S+ +++L+ + P+++ +S DD +L + ++S +N + C++
Sbjct: 324 SVAAEKEVLEEGEMDFPIEIKSSDEEQTDLDDEEESMLDSDFEIS-DNEDVSKPSCSTSK 382
Query: 190 KDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLS 231
K T + S+ +ND + K+ K KN T +S
Sbjct: 383 KTTNRSRDSSESDNDSRDNELQKKKRKMKRKNVPKTDGSDVS 424
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 201 KENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKRE 241
+E+D Q+K +KK +K+K D + + K+ K++E
Sbjct: 284 EESDFEQKKKKKVKKSKKSKKDKKKEKKEKKKSKKANKEKE 324
>Z81568-2|CAB04590.1| 276|Caenorhabditis elegans Hypothetical
protein K08E3.2 protein.
Length = 276
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 190 KDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGL 247
KD DDEK ++ ++ ++K + K +K K+ ++ L + T +++ L L
Sbjct: 136 KDEKKDDEKDERNDEKKEEKKDDQKDDKKAKSMISVDAPELIFERTITSQKKLLLKNL 193
>Z68301-9|CAA92628.1| 456|Caenorhabditis elegans Hypothetical
protein T04B2.5 protein.
Length = 456
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/59 (23%), Positives = 27/59 (45%)
Query: 145 KTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKEN 203
+ + K + ++++ D +++W L TEN EID L K E+ ++ N
Sbjct: 395 RLSPKGISVRIDQIDDSKLMDMIWTTLIYLTENVHEIDQLGEMIYKLKSDPTERKRRSN 453
>Z68299-8|CAA92615.1| 456|Caenorhabditis elegans Hypothetical
protein T04B2.5 protein.
Length = 456
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/59 (23%), Positives = 27/59 (45%)
Query: 145 KTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKEN 203
+ + K + ++++ D +++W L TEN EID L K E+ ++ N
Sbjct: 395 RLSPKGISVRIDQIDDSKLMDMIWTTLIYLTENVHEIDQLGEMIYKLKSDPTERKRRSN 453
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 194 IDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKRLLD 253
+ D S ++D +++K K R ++D + D + + K +KK + + K
Sbjct: 218 VSDSDSDSDSDFDKKKWKKNKAKRSKRDDSSDDDSEMERRRKKSKKSKKSKK-FKKSEKR 276
Query: 254 KDAVNAHRAEDD 265
K AVN ++D+
Sbjct: 277 KRAVNDSSSDDE 288
>Z70309-10|CAA94361.2| 324|Caenorhabditis elegans Hypothetical
protein R102.7 protein.
Length = 324
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 202 ENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNAHR 261
E+D+ Q+K R +K TT++ +LS+Q T + + T K+++ K + H+
Sbjct: 249 EDDMTQKKVVKKPSSRPHKKPSTTREHTLSVQ--KTVEDDMT----QKKVVKKPSSRPHK 302
Query: 262 AEDDCVILIE 271
+L++
Sbjct: 303 KPSTMEVLLK 312
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 195 DDEKSKK--END-LNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKRE 241
DD+KSKK E D L+ +K K RK+K D +D +NK K E
Sbjct: 97 DDKKSKKTEEKDKLSVKKTQETKSERKDKKDERKEDDKKE-ENKEKSKDE 145
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
protein F54D11.2 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 7.1
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 144 LKTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKEN 203
+K +KSLP K S E S+ ++ C SFS++ +DDE +++
Sbjct: 1 MKPGRKSLPKKNRASNITEKMPTTSTEAQSSSSKNQD---RCRSFSQELGVDDEPEEQQA 57
Query: 204 DLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKRE 241
+ K T KK +K TT++ + KS +K E
Sbjct: 58 PVATPKQT--KKAQKTAK--TTEE--VKSPRKSARKSE 89
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 208 QKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNAHRAEDDCV 267
QK N++ G+K K T Q++S+ R + ++ L ++H A++ CV
Sbjct: 262 QKEKNVEAGQKKKTSSTFARLK---QHRSSSSRHSSYLAVFGSLTSVAQSSSHSAQERCV 318
Query: 268 ILIE 271
I +E
Sbjct: 319 ICLE 322
>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
protein ZC132.5 protein.
Length = 1277
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 125 ILLPSDLLCIDSLIGFRKILKTTQKSLPLKMNTS 158
I LPS +L I ++ G+ + K T+ S PL+M+++
Sbjct: 45 IQLPSGILLIKTVFGYTTMGKNTKWSKPLEMDST 78
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 154 KMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKS-KKENDLNQQKCTN 212
K + KD+ E + D + E+ D KD D++K KKE +K +
Sbjct: 102 KEDDKKDEKKDE---DKKDEKKDADEKKDEEKKDDKKDEKKDEKKDEKKEKSKKSKKSSK 158
Query: 213 LKKGRKNKNDLTTQDQSLSIQNKSTKK 239
KK +K+K + +D+ + + KK
Sbjct: 159 SKKSKKSKREKKDEDKKEDDKKEDDKK 185
>AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical
protein Y76B12C.4 protein.
Length = 252
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/50 (30%), Positives = 20/50 (40%)
Query: 197 EKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTG 246
+K KK D + K + K + KN T + K TKK TG
Sbjct: 166 KKEKKLRDRERLKTEKIDKSTETKNSTTPSTEKEKSSMKKTKKEAAVATG 215
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 195 DDEKSKK--END-LNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKRE 241
DD+KSKK E D ++ +K K RK+K D +D+ + +K E
Sbjct: 91 DDKKSKKTEEKDKISVKKTQETKSERKDKKDEKKEDEKKEESKEKSKDEE 140
>AF026215-4|AAB71322.1| 843|Caenorhabditis elegans Hypothetical
protein F09G2.4 protein.
Length = 843
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 164 SELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKKGRKN 219
+ L W +D E IDN+ A + + IDD+ +E D+N Q+ +G N
Sbjct: 661 NSLAW--IDARVMEKEAIDNMLAVGTSNLMIDDK--NREEDVNDQEENGATEGEGN 712
>AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical
protein Y59E9AL.6 protein.
Length = 214
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 195 DDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKK 239
DD+K +K++D +K + K+ + K D +D+ K KK
Sbjct: 117 DDKKDEKKSDKKDEKKDDKKEKDEEKKDDKKEDEKKDDDKKDDKK 161
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.134 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,776,777
Number of Sequences: 27539
Number of extensions: 347312
Number of successful extensions: 1320
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1231
Number of HSP's gapped (non-prelim): 115
length of query: 300
length of database: 12,573,161
effective HSP length: 81
effective length of query: 219
effective length of database: 10,342,502
effective search space: 2265007938
effective search space used: 2265007938
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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