Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000125-TA|BGIBMGA000125-PA|IPR013520|Exonuclease, RNase
T and DNA polymerase III, IPR006055|Exonuclease,
IPR012337|Polynucleotidyl transferase, Ribonuclease H fold
(300 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 25 0.82
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 1.4
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 23 2.5
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 23 2.5
DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. 23 3.3
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 4.4
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 22 7.6
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 22 7.6
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 22 7.6
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 22 7.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 7.6
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 25.0 bits (52), Expect = 0.82
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 193 CIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQS 229
C+++ ++ + N Q N K +KN N+ +Q+
Sbjct: 414 CVNNNQNDNIQNTNNQNDNNQKNNKKNANNQKNNNQN 450
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 133 CIDSLIGFRKILKTTQKSLPLKMNTSKDDSASEL 166
C++ + KIL+T QK++ L M + D + E+
Sbjct: 1310 CVEDMKRGNKILRTCQKAVVLSMLLDEVDISMEV 1343
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 23.4 bits (48), Expect = 2.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 246 GLYKRLLDKDAVNAHRAEDDCVI 268
G +KR + KD A R E C+I
Sbjct: 132 GFFKRTVRKDLSYACREEKSCII 154
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 23.4 bits (48), Expect = 2.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 246 GLYKRLLDKDAVNAHRAEDDCVI 268
G +KR + KD A R E C+I
Sbjct: 132 GFFKRTVRKDLSYACREEKSCII 154
>DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein.
Length = 132
Score = 23.0 bits (47), Expect = 3.3
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 201 KENDLNQQKCTNLKKGRKNKND 222
+EN ++ +K ++KKG +KND
Sbjct: 35 EENGIDLKKADDVKKGIFDKND 56
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.6 bits (46), Expect = 4.4
Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 12/100 (12%)
Query: 168 WPELDVSTENWEEIDNL--CA----SFSKDTCIDDEKSKKE-----NDLNQQKCTN-LKK 215
W D+ WE I NL C+ F ++ E K++ N+ + +K N LK+
Sbjct: 265 WKNWDLKYNTWEPISNLINCSDILEEFERNRLQLLESFKRKVNFYPNNQDIEKFLNYLKR 324
Query: 216 GRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKD 255
G K ++ + ++ I K+++ ++++ D
Sbjct: 325 GGKTLTSISVESNTMFINILKFLKQKYVKNSKLEKVIKHD 364
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 207 QQKCTNLKKGRKNKNDLTTQDQSLSIQNKST 237
Q K +KK KN L Q + + N ST
Sbjct: 69 QNKRAKIKKASGQKNPLALQLMAQGLYNHST 99
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 207 QQKCTNLKKGRKNKNDLTTQDQSLSIQNKST 237
Q K +KK KN L Q + + N ST
Sbjct: 69 QNKRAKIKKASGQKNPLALQLMAQGLYNHST 99
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 160 DDSASELLWPELDVSTENWEEIDNLCASFSKDTCI 194
DD E L E+ ++ + ++EI L + S D +
Sbjct: 32 DDENCETLQSEVHITKDEYDEIGRLKRTCSGDISV 66
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 160 DDSASELLWPELDVSTENWEEIDNLCASFSKDTCI 194
DD E L E+ ++ + ++EI L + S D +
Sbjct: 32 DDENCETLQSEVHITKDEYDEIGRLKRTCSGDISV 66
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 199 SKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKK 239
S + N KC++ K+ + + S+ ++S+KK
Sbjct: 870 SHENNQPTMNKCSDRKRPASQATSVKAEPGSIMAMSESSKK 910
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.317 0.134 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,906
Number of Sequences: 429
Number of extensions: 3956
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 11
length of query: 300
length of database: 140,377
effective HSP length: 57
effective length of query: 243
effective length of database: 115,924
effective search space: 28169532
effective search space used: 28169532
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)
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