Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000123-TA|BGIBMGA000123-PA|IPR008580|Protein of unknown
function DUF862, eukaryotic
(118 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g47740.2 68414.m05309 expressed protein 94 2e-20
At1g47740.1 68414.m05308 expressed protein 94 2e-20
At1g80690.1 68414.m09468 expressed protein 91 2e-19
At5g25170.1 68418.m02984 expressed protein 89 5e-19
At2g25190.1 68415.m03012 expressed protein 87 3e-18
At5g47310.1 68418.m05832 expressed protein 84 3e-17
At4g17486.1 68417.m02616 expressed protein 82 1e-16
At4g31980.1 68417.m04547 expressed protein contains Pfam profile... 81 2e-16
At4g25680.1 68417.m03697 expressed protein 44 2e-05
At4g25660.1 68417.m03695 expressed protein 44 2e-05
At5g19350.1 68418.m02306 RNA-binding protein 45 (RBP45), putative 30 0.35
At3g07090.1 68416.m00843 expressed protein 28 1.4
At5g60870.2 68418.m07635 regulator of chromosome condensation (R... 28 1.9
At5g60870.1 68418.m07636 regulator of chromosome condensation (R... 28 1.9
At1g67070.1 68414.m07627 phosphomannose isomerase, putative (DIN... 27 2.5
At1g10900.1 68414.m01252 phosphatidylinositol-4-phosphate 5-kina... 27 2.5
At5g16040.1 68418.m01875 regulator of chromosome condensation (R... 27 4.4
>At1g47740.2 68414.m05309 expressed protein
Length = 279
Score = 94.3 bits (224), Expect = 2e-20
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
Query: 15 SQHPRPGQATVVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEIS 74
S + PG+A V LNVYD+ N Y AGLG+FHSGV+VHG E+A+G H YA +GVFE+
Sbjct: 61 SNNHGPGRAPVYLNVYDLTPINGYIYWAGLGIFHSGVEVHGVEYAFGAHDYATSGVFEVE 120
Query: 75 PRDERELGEQFRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGD 117
PR F+F++S+ IG T+ + +VR + ++ + G+
Sbjct: 121 PRQ----CPGFKFKKSIFIGTTNLNPTQVREFMEDMACSYYGN 159
>At1g47740.1 68414.m05308 expressed protein
Length = 279
Score = 94.3 bits (224), Expect = 2e-20
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
Query: 15 SQHPRPGQATVVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEIS 74
S + PG+A V LNVYD+ N Y AGLG+FHSGV+VHG E+A+G H YA +GVFE+
Sbjct: 61 SNNHGPGRAPVYLNVYDLTPINGYIYWAGLGIFHSGVEVHGVEYAFGAHDYATSGVFEVE 120
Query: 75 PRDERELGEQFRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGD 117
PR F+F++S+ IG T+ + +VR + ++ + G+
Sbjct: 121 PRQ----CPGFKFKKSIFIGTTNLNPTQVREFMEDMACSYYGN 159
>At1g80690.1 68414.m09468 expressed protein
Length = 227
Score = 91.1 bits (216), Expect = 2e-19
Identities = 49/109 (44%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Query: 8 LLSRRSDSQHPRPGQATVVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAF 67
+L R++ S R G V LNVYD+ N Y GLGV+HSGV+VHG E+AYG H Y
Sbjct: 1 MLCRKNSSLVDR-GNVPVYLNVYDLTPINGYAYWLGLGVYHSGVEVHGIEYAYGAHEYPS 59
Query: 68 TGVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVRRLVAELGKQFRG 116
TG+FE P+ E F FR+S+ IG TD EVR + +L ++G
Sbjct: 60 TGIFEGEPKQ----CEGFTFRKSILIGKTDLGPLEVRATMEQLADNYKG 104
>At5g25170.1 68418.m02984 expressed protein
Length = 218
Score = 89.4 bits (212), Expect = 5e-19
Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 19 RPGQATVVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDE 78
+PG V LNVYD+ N Y GLG++HSGV+VHG E+ +G H ++ TG+FE+ P+
Sbjct: 14 KPGSVPVYLNVYDLTPINGYAYWLGLGIYHSGVEVHGVEYGFGAHDHSTTGIFEVEPKQ- 72
Query: 79 RELGEQFRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGD 117
F FR+S+ IG TD E VR + +L +++ G+
Sbjct: 73 ---CPGFTFRKSILIGRTDLDPENVRVFMEKLAEEYSGN 108
>At2g25190.1 68415.m03012 expressed protein
Length = 240
Score = 87.0 bits (206), Expect = 3e-18
Identities = 44/111 (39%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 8 LLSRRSDSQHPRPGQATVVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAF 67
L + S + + G V LNVYD+ N Y GLGVFHSGV+VHG E+A+G H +
Sbjct: 2 LCFKGSVKRKKQSGSVPVYLNVYDLTPMNAYGYWLGLGVFHSGVEVHGVEYAFGAHESSS 61
Query: 68 TGVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGDR 118
TG+FE+ P+ F FR+S+ +G TD +EVR + +L ++++G++
Sbjct: 62 TGIFEVEPKK----CPGFTFRKSILVGKTDLVAKEVRVFMEKLAEEYQGNK 108
>At5g47310.1 68418.m05832 expressed protein
Length = 245
Score = 83.8 bits (198), Expect = 3e-17
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 25 VVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQ 84
V LNVYD+ N Y GLG+FHSG++ HG E+ YG H Y+ +GVFE+ PR
Sbjct: 30 VYLNVYDLTPVNNYLYWFGLGIFHSGIEAHGFEYGYGAHEYSSSGVFEVEPRS----CPG 85
Query: 85 FRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGD 117
F FR+SV +G T S + R + +L +++ GD
Sbjct: 86 FIFRRSVLLGTTSMSRSDFRSFMEKLSRKYHGD 118
>At4g17486.1 68417.m02616 expressed protein
Length = 224
Score = 81.8 bits (193), Expect = 1e-16
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 1 MFPSCMSLLSRRSDSQHPRPGQAT---VVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSE 57
M+ +S S SD + G+A V LNVYD+ N Y G+G+FHSG++ H E
Sbjct: 1 MWVPTLSSSSCSSDERDESSGEAALTPVYLNVYDLTPVNNYLYWFGIGIFHSGIEAHNLE 60
Query: 58 WAYGGHPYAFTGVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGD 117
+ YG H Y +GV+E+ PR+ F FR+SV +G T S + R + +L +++ GD
Sbjct: 61 YCYGAHEYPTSGVYEVEPRN----CPGFIFRRSVLLGTTSMSRSDFRSYMEKLSRKYHGD 116
>At4g31980.1 68417.m04547 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 680
Score = 81.0 bits (191), Expect = 2e-16
Identities = 36/98 (36%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 21 GQATVVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERE 80
G V LNVYD+ N Y G+G++HSG++VHG E+ YG H + +G+FE+ P+
Sbjct: 15 GTVPVYLNVYDLTPMNVYGYWLGIGIYHSGLEVHGVEYGYGAHEKSSSGIFEVEPKK--- 71
Query: 81 LGEQFRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGDR 118
F FR+S+ +G T+ +EVR + +L ++++G++
Sbjct: 72 -CPGFTFRKSILVGETEMKAKEVRSFMEKLSEEYQGNK 108
>At4g25680.1 68417.m03697 expressed protein
Length = 252
Score = 44.4 bits (100), Expect = 2e-05
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Query: 37 WYTAGAGLG-VFHSGVQVHGS-EWAYGGHPYAFTGVFEISPRDERELGEQFRFRQSVHIG 94
++ G GLG +FHS +QV+G+ EW+Y G+ TGVF P + + + +R+ + +G
Sbjct: 29 FFKDGIGLGGIFHSAIQVYGNDEWSY-GYCELGTGVFS-CPSGKNPM---YTYREKIVLG 83
Query: 95 YTDFSEEEVRRLVAELGKQFRG 116
TD + V +++ EL +++ G
Sbjct: 84 KTDCTIFMVNQMLRELSREWPG 105
>At4g25660.1 68417.m03695 expressed protein
Length = 255
Score = 44.4 bits (100), Expect = 2e-05
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Query: 37 WYTAGAGLG-VFHSGVQVHGS-EWAYGGHPYAFTGVFEISPRDERELGEQFRFRQSVHIG 94
++ G GLG +FHS +QV+G+ EW+Y G+ TGVF P + + + +R+ + +G
Sbjct: 29 FFKDGIGLGGIFHSAIQVYGNDEWSY-GYCEQGTGVFS-CPSGKNPM---YTYREKIVLG 83
Query: 95 YTDFSEEEVRRLVAELGKQFRG 116
TD + V +++ EL +++ G
Sbjct: 84 KTDCTIFMVNQILRELSREWPG 105
>At5g19350.1 68418.m02306 RNA-binding protein 45 (RBP45), putative
Length = 425
Score = 30.3 bits (65), Expect = 0.35
Identities = 15/46 (32%), Positives = 19/46 (41%)
Query: 20 PGQATVVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPY 65
PGQ V W +Y G G + G S +AYGG+ Y
Sbjct: 310 PGQDGWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGYGY 355
>At3g07090.1 68416.m00843 expressed protein
Length = 265
Score = 28.3 bits (60), Expect = 1.4
Identities = 9/18 (50%), Positives = 16/18 (88%)
Query: 45 GVFHSGVQVHGSEWAYGG 62
GV+H+G+ V+G+E+ +GG
Sbjct: 34 GVWHTGIVVYGNEYFFGG 51
>At5g60870.2 68418.m07635 regulator of chromosome condensation
(RCC1) family protein weak similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530;
contains Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 383
Score = 27.9 bits (59), Expect = 1.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 38 YTAGAGLGVFHSGVQVHGSEWAYG 61
+ G G+FHSG+ + G W +G
Sbjct: 33 FRIGISCGLFHSGLTIDGDLWIWG 56
>At5g60870.1 68418.m07636 regulator of chromosome condensation
(RCC1) family protein weak similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 445
Score = 27.9 bits (59), Expect = 1.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 38 YTAGAGLGVFHSGVQVHGSEWAYG 61
+ G G+FHSG+ + G W +G
Sbjct: 102 FRIGISCGLFHSGLTIDGDLWIWG 125
>At1g67070.1 68414.m07627 phosphomannose isomerase, putative (DIN9)
contains Pfam profile: PF01238 phosphomannose isomerase
type I ;similar to phosphomannose isomerase GI:10834550
from [Arabidopsis thaliana]; identical to cDNA
phosphomannose isomerase (din9) partial cds GI:10834549
Length = 441
Score = 27.5 bits (58), Expect = 2.5
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 67 FTGVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGD 117
FT + S + +++ + + R + + + SE+E +LV EL KQ+ GD
Sbjct: 220 FTQLMSASNNETKQVVSRMKNRLLLETKHRELSEKE--KLVLELEKQYTGD 268
>At1g10900.1 68414.m01252 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 754
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 28 NVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYG 61
++YD +W N + G+G+ F G +G+ W+ G
Sbjct: 152 DLYDGFWLNGFRHGSGVYKFADGCLYYGT-WSRG 184
>At5g16040.1 68418.m01875 regulator of chromosome condensation
(RCC1) family protein similar to UVB-resistance protein
UVR8 [Arabidopsis thaliana] GI:5478530; contains Pfam
profile PF00415: Regulator of chromosome condensation
(RCC1)
Length = 396
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 44 LGVFHS-GVQVHGSEWAYGGHPYAFTGVFEISPR 76
+G FH+ ++ G+ WA+G + Y G + PR
Sbjct: 203 VGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPR 236
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.322 0.138 0.442
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,043,194
Number of Sequences: 28952
Number of extensions: 123616
Number of successful extensions: 251
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 229
Number of HSP's gapped (non-prelim): 17
length of query: 118
length of database: 12,070,560
effective HSP length: 72
effective length of query: 46
effective length of database: 9,986,016
effective search space: 459356736
effective search space used: 459356736
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 54 (25.8 bits)
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