Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000123-TA|BGIBMGA000123-PA|IPR008580|Protein of unknown
function DUF862, eukaryotic
(118 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58622| Best HMM Match : GCV_T (HMM E-Value=6e-17) 28 1.7
SB_37028| Best HMM Match : Ice_nucleation (HMM E-Value=0.0014) 28 2.3
SB_8444| Best HMM Match : BRE (HMM E-Value=6.4) 26 7.0
SB_55115| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_5724| Best HMM Match : Vicilin_N (HMM E-Value=3) 26 9.3
SB_36381| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.3
>SB_58622| Best HMM Match : GCV_T (HMM E-Value=6e-17)
Length = 515
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 37 WYTAGAGLGVFHS-GVQVHGSEWAYGGHP 64
W G G G+ HS G+ + S+W G P
Sbjct: 143 WVAIGTGYGIIHSGGIGKYLSDWIIDGEP 171
>SB_37028| Best HMM Match : Ice_nucleation (HMM E-Value=0.0014)
Length = 916
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query: 50 GVQVHGSE--WAY---GGHPYAFTGVFEISPRDERELGEQ 84
GVQ +GS W Y G H Y TGV+E +E G Q
Sbjct: 179 GVQEYGSTGVWGYRSMGVHEYGSTGVWEYRSMGVQECGSQ 218
>SB_8444| Best HMM Match : BRE (HMM E-Value=6.4)
Length = 502
Score = 26.2 bits (55), Expect = 7.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 51 VQVHGSEWAYGGHPYAFT---GVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVRRLV 107
+ + G E+AYG Y G+ E +PR LG +F + QS + E R +
Sbjct: 274 LNILGREFAYG-QSYIMAVVHGLTERNPRCLNILGREFAYGQSYIMAVVHGLTERNPRCL 332
Query: 108 AELGKQF 114
LG++F
Sbjct: 333 NILGREF 339
Score = 26.2 bits (55), Expect = 7.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 51 VQVHGSEWAYGGHPYAFT---GVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVRRLV 107
+ + G E+AYG Y G+ E +PR LG +F + QS + E R +
Sbjct: 303 LNILGREFAYG-QSYIMAVVHGLTERNPRCLNILGREFAYGQSYIMAVVHGLTERNPRCL 361
Query: 108 AELGKQF 114
LG++F
Sbjct: 362 NILGREF 368
Score = 26.2 bits (55), Expect = 7.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 51 VQVHGSEWAYGGHPYAFT---GVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVRRLV 107
+ + G E+AYG Y G+ E +PR LG +F + QS + E R +
Sbjct: 332 LNILGREFAYG-QSYIMAVVHGLTERNPRCLNILGREFAYGQSYIMAVVHGLTERNPRCL 390
Query: 108 AELGKQF 114
LG++F
Sbjct: 391 NILGREF 397
Score = 26.2 bits (55), Expect = 7.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 51 VQVHGSEWAYGGHPYAFT---GVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVRRLV 107
+ + G E+AYG Y G+ E +PR LG +F + QS + E R +
Sbjct: 361 LNILGREFAYG-QSYIMAVVHGLTERNPRCLNILGREFAYGQSYIMAVVHGLTERNPRCL 419
Query: 108 AELGKQF 114
LG++F
Sbjct: 420 NILGREF 426
Score = 25.8 bits (54), Expect = 9.3
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 51 VQVHGSEWAYGGHPYAFT---GVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVRRLV 107
+ + G E+AYG Y G+ E +PR LG +F + QS + E R
Sbjct: 390 LNILGREFAYG-QSYIMAVVHGLTERNPRCLNILGREFSYGQSYIMAVVHGLTERSSRCP 448
Query: 108 AELGKQF 114
LG++F
Sbjct: 449 NILGREF 455
>SB_55115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 26.2 bits (55), Expect = 7.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 51 VQVHGSEWAYGGHPYAFT---GVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVRRLV 107
+ + G E+AYG Y G+ E +PR LG +F + QS + E R +
Sbjct: 79 LNILGREFAYG-QSYIMAVVHGLTERNPRCLNILGREFAYGQSYIMAVVHGLTERNPRCL 137
Query: 108 AELGKQF 114
LG++F
Sbjct: 138 NILGREF 144
Score = 26.2 bits (55), Expect = 7.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 51 VQVHGSEWAYGGHPYAFT---GVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVRRLV 107
+ + G E+AYG Y G+ E +PR LG +F + QS + E R +
Sbjct: 108 LNILGREFAYG-QSYIMAVVHGLTERNPRCLNILGREFAYGQSYIMAVVHGLTERNPRCL 166
Query: 108 AELGKQF 114
LG++F
Sbjct: 167 NILGREF 173
Score = 26.2 bits (55), Expect = 7.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 51 VQVHGSEWAYGGHPYAFT---GVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVRRLV 107
+ + G E+AYG Y G+ E +PR LG +F + QS + E R +
Sbjct: 137 LNILGREFAYG-QSYIMAVVHGLTERNPRCLNILGREFAYGQSYIMAVVHGLTERNPRCL 195
Query: 108 AELGKQF 114
LG++F
Sbjct: 196 NILGREF 202
Score = 26.2 bits (55), Expect = 7.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 51 VQVHGSEWAYGGHPYAFT---GVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVRRLV 107
+ + G E+AYG Y G+ E +PR LG +F + QS + E R +
Sbjct: 166 LNILGREFAYG-QSYIMAVVHGLTERNPRCLNILGREFAYGQSYIMAVVHGLTERNPRCL 224
Query: 108 AELGKQF 114
LG++F
Sbjct: 225 NILGREF 231
Score = 25.8 bits (54), Expect = 9.3
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 51 VQVHGSEWAYGGHPYAFT---GVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVRRLV 107
+ + G E+AYG Y G+ E +PR LG +F + QS + E R
Sbjct: 195 LNILGREFAYG-QSYIMAVVHGLTERNPRCLNILGREFSYGQSYIMAVVHGLTERSSRCP 253
Query: 108 AELGKQF 114
LG++F
Sbjct: 254 NILGREF 260
>SB_5724| Best HMM Match : Vicilin_N (HMM E-Value=3)
Length = 861
Score = 25.8 bits (54), Expect = 9.3
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 29 VYDMYWTNWYTAGAGLGVFHSGVQVH-GSEWAYGGHPYAFTGVFEISPRDERELGEQFRF 87
V+ M++ + G + G H G +Y G FT +E+S R + +R
Sbjct: 411 VFMMHYGGFTRHYGGFTRHYGGFTRHYGGLISYNG---GFTSYYEVSSRHFGDFARYYRI 467
Query: 88 RQSVHIGYT 96
Q ++ G+T
Sbjct: 468 SQGIYGGFT 476
>SB_36381| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 78 ERELGEQFRFRQSVHIGYTDFSE 100
+R+ G QFR R +GY FS+
Sbjct: 161 DRDKGYQFRVRAQTRLGYGPFSD 183
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.138 0.442
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,204,743
Number of Sequences: 59808
Number of extensions: 164706
Number of successful extensions: 302
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 293
Number of HSP's gapped (non-prelim): 16
length of query: 118
length of database: 16,821,457
effective HSP length: 73
effective length of query: 45
effective length of database: 12,455,473
effective search space: 560496285
effective search space used: 560496285
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 54 (25.8 bits)
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