Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000123-TA|BGIBMGA000123-PA|IPR008580|Protein of unknown
function DUF862, eukaryotic
(118 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53181-11|AAM29689.1| 315|Caenorhabditis elegans Hypothetical p... 131 1e-31
U53181-10|AAA93489.2| 334|Caenorhabditis elegans Hypothetical p... 131 1e-31
U64855-4|AAB04983.1| 445|Caenorhabditis elegans Hypothetical pr... 31 0.28
Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical pr... 27 3.4
X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic int... 27 3.4
Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical pr... 27 4.5
X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic int... 27 4.5
AL021488-5|CAL49450.1| 408|Caenorhabditis elegans Hypothetical ... 27 4.5
AL021488-4|CAA16363.2| 531|Caenorhabditis elegans Hypothetical ... 27 4.5
Z66564-6|CAA91473.4| 737|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z48178-1|CAA88204.1| 471|Caenorhabditis elegans Hypothetical pr... 26 7.9
AY887904-1|AAX34416.1| 737|Caenorhabditis elegans anion transpo... 26 7.9
AF025452-4|AAB70945.1| 642|Caenorhabditis elegans Hypothetical ... 26 7.9
AC024788-4|ABE73331.1| 305|Caenorhabditis elegans Hypothetical ... 26 7.9
>U53181-11|AAM29689.1| 315|Caenorhabditis elegans Hypothetical
protein F36D4.5b protein.
Length = 315
Score = 131 bits (317), Expect = 1e-31
Identities = 56/96 (58%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
Query: 24 TVV-LNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELG 82
TVV LNVYDMYW N Y + G+G+FHSG++V G E+AYGGHPY F+GVFE SP+D ELG
Sbjct: 11 TVVRLNVYDMYWLNDYASNIGVGIFHSGIEVFGVEYAYGGHPYQFSGVFENSPQDAEELG 70
Query: 83 EQFRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGDR 118
E F+F++S+ +G T+ S ++R+L+ LG+ FRGDR
Sbjct: 71 ETFKFKESIVVGETERSTSDIRKLIKSLGEDFRGDR 106
>U53181-10|AAA93489.2| 334|Caenorhabditis elegans Hypothetical
protein F36D4.5a protein.
Length = 334
Score = 131 bits (317), Expect = 1e-31
Identities = 56/96 (58%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
Query: 24 TVV-LNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELG 82
TVV LNVYDMYW N Y + G+G+FHSG++V G E+AYGGHPY F+GVFE SP+D ELG
Sbjct: 30 TVVRLNVYDMYWLNDYASNIGVGIFHSGIEVFGVEYAYGGHPYQFSGVFENSPQDAEELG 89
Query: 83 EQFRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGDR 118
E F+F++S+ +G T+ S ++R+L+ LG+ FRGDR
Sbjct: 90 ETFKFKESIVVGETERSTSDIRKLIKSLGEDFRGDR 125
>U64855-4|AAB04983.1| 445|Caenorhabditis elegans Hypothetical
protein ZK742.4 protein.
Length = 445
Score = 30.7 bits (66), Expect = 0.28
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 45 GVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGE 83
GV +SG+ +W +GG FTG I PR E G+
Sbjct: 53 GVPNSGLVHLYEKWGFGGFGIVFTGNLVIDPRHPYEAGQ 91
>Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 27.1 bits (57), Expect = 3.4
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 36 NWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGE--QFRFRQSVHI 93
N+ T +G V + H S A G PY I ERE E + R + +I
Sbjct: 27 NYGTPASGNRVLKIVTETHTSSVASGLSPYGQGAASTIRDDREREKKEITELNDRLASYI 86
Query: 94 GYTDFSEEEVRRLVAEL 110
G F + R+L A+L
Sbjct: 87 GKVRFLAAQNRKLEADL 103
>Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 27.1 bits (57), Expect = 3.4
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 36 NWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGE--QFRFRQSVHI 93
N+ T +G V + H S A G PY I ERE E + R + +I
Sbjct: 27 NYGTPASGNRVLKIVTETHTSSVASGLSPYGQGAASTIRDDREREKKEITELNDRLASYI 86
Query: 94 GYTDFSEEEVRRLVAEL 110
G F + R+L A+L
Sbjct: 87 GKVRFLAAQNRKLEADL 103
>X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 27.1 bits (57), Expect = 3.4
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 36 NWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGE--QFRFRQSVHI 93
N+ T +G V + H S A G PY I ERE E + R + +I
Sbjct: 27 NYGTPASGNRVLKIVTETHTSSVASGLSPYGQGAASTIRDDREREKKEITELNDRLASYI 86
Query: 94 GYTDFSEEEVRRLVAEL 110
G F + R+L A+L
Sbjct: 87 GKVRFLAAQNRKLEADL 103
>Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical
protein W10G6.3 protein.
Length = 581
Score = 26.6 bits (56), Expect = 4.5
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 36 NWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGE--QFRFRQSVHI 93
N+ G+G V + H S + G PY I ERE E + R + +I
Sbjct: 27 NYGAPGSGNRVLKIVTETHSSSVSSGLSPYGQNAASTIRDNREREKKEIMELNDRLASYI 86
Query: 94 GYTDFSEEEVRRLVAELGKQFRG 116
F + + R+L A+L K +G
Sbjct: 87 EKVRFLDAQNRKLDADL-KMLQG 108
>X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 26.6 bits (56), Expect = 4.5
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 36 NWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGE--QFRFRQSVHI 93
N+ G+G V + H S + G PY I ERE E + R + +I
Sbjct: 27 NYGAPGSGNRVLKIVTETHSSSVSSGLSPYGQNAASTIRDNREREKKEIMELNDRLASYI 86
Query: 94 GYTDFSEEEVRRLVAELGKQFRG 116
F + + R+L A+L K +G
Sbjct: 87 EKVRFLDAQNRKLDADL-KMLQG 108
>AL021488-5|CAL49450.1| 408|Caenorhabditis elegans Hypothetical
protein Y45F10A.7b protein.
Length = 408
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 24 TVVLNVYDMYWTN-WYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGV 70
T +NVY+M + G +G++ V+G+ + GGH YA +
Sbjct: 186 TFFINVYNMMLIHITLKHGPPIGIWQRRKLVNGTYYLIGGHRYALHSI 233
>AL021488-4|CAA16363.2| 531|Caenorhabditis elegans Hypothetical
protein Y45F10A.7a protein.
Length = 531
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 24 TVVLNVYDMYWTN-WYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGV 70
T +NVY+M + G +G++ V+G+ + GGH YA +
Sbjct: 309 TFFINVYNMMLIHITLKHGPPIGIWQRRKLVNGTYYLIGGHRYALHSI 356
>Z66564-6|CAA91473.4| 737|Caenorhabditis elegans Hypothetical
protein F52D10.1 protein.
Length = 737
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 44 LGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDER 79
+GV + G+ + G W +G P A+ + +S ++R
Sbjct: 550 VGVLNIGLSIFGLPWMHGALPSAYLHLKALSDVEDR 585
>Z48178-1|CAA88204.1| 471|Caenorhabditis elegans Hypothetical
protein C05C10.1 protein.
Length = 471
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 19 RPGQATVVLNVYDMYWTNWYTAGAGLG 45
R G+ + + ++Y +Y +W G GLG
Sbjct: 3 RHGERSALADLYPIYEKDWVFGGGGLG 29
>AY887904-1|AAX34416.1| 737|Caenorhabditis elegans anion
transporter ABTS-2 protein.
Length = 737
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 44 LGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDER 79
+GV + G+ + G W +G P A+ + +S ++R
Sbjct: 550 VGVLNIGLSIFGLPWMHGALPSAYLHLKALSDVEDR 585
>AF025452-4|AAB70945.1| 642|Caenorhabditis elegans Hypothetical
protein B0454.8 protein.
Length = 642
Score = 25.8 bits (54), Expect = 7.9
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 18 PRPGQATVVLNVYDMYWTNWYTAGAGLG 45
P+ TV N DM WT YTA AG G
Sbjct: 601 PQEVTITVTCNSADMTWT--YTADAGTG 626
>AC024788-4|ABE73331.1| 305|Caenorhabditis elegans Hypothetical
protein Y46E12A.4 protein.
Length = 305
Score = 25.8 bits (54), Expect = 7.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 70 VFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGDR 118
++EISP +F+F ++ I T + E V++L + K +G R
Sbjct: 134 IYEISPVGAHNQIGKFQFPETKFIAVTAYQSELVKQLKVQKNKFAQGFR 182
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.138 0.442
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,063,191
Number of Sequences: 27539
Number of extensions: 120618
Number of successful extensions: 232
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 225
Number of HSP's gapped (non-prelim): 15
length of query: 118
length of database: 12,573,161
effective HSP length: 73
effective length of query: 45
effective length of database: 10,562,814
effective search space: 475326630
effective search space used: 475326630
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 54 (25.8 bits)
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