Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000122-TA|BGIBMGA000122-PA|undefined
         (216 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    23   1.4  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   7.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.9  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   9.9  

>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query: 58  KGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKK 105
           K NEK      KVL  L +N   + ++ +      G+YR+K   E +K
Sbjct: 72  KCNEKVKANVRKVLHHLIDNKPDMWKQLEAKYDPSGEYRSKYKDELEK 119


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
          protein 19 protein.
          Length = 119

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 58 KGNEKQLQETWKVLTVLKNNNQ 79
          K +EKQ + T KV+  L +N Q
Sbjct: 72 KCSEKQKEMTKKVIHFLSHNKQ 93


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 17  QKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTL 54
           +KPC I+++   G+D      Q    + W + +   TL
Sbjct: 206 RKPCSINENLKMGLDIASITAQASSFVVWPLVENNPTL 243


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 17  QKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTL 54
           +KPC I+++   G+D      Q    + W + +   TL
Sbjct: 206 RKPCSINENLKMGLDIASITAQASSFVVWPLVENNPTL 243


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 61  EKQLQETWKVLTVLKN 76
           +K +Q+ W   T LKN
Sbjct: 324 KKIMQKAWSFFTALKN 339


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.310    0.126    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,704
Number of Sequences: 317
Number of extensions: 1788
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 216
length of database: 114,650
effective HSP length: 54
effective length of query: 162
effective length of database: 97,532
effective search space: 15800184
effective search space used: 15800184
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.3 bits)
S2: 41 (20.6 bits)