Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000122-TA|BGIBMGA000122-PA|undefined
(216 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein Did4... 31 0.13
SPBC1718.03 |ker1||DNA-directed RNA polymerase I complex subunit... 30 0.23
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 29 0.40
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 28 0.91
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.2
SPBC25B2.06c |btb2||BTB/POZ domain protein Btb2|Schizosaccharomy... 28 1.2
SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces pom... 28 1.2
SPBC1198.07c |||mannan endo-1,6-alpha-mannosidase |Schizosacchar... 28 1.2
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c... 27 1.6
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 27 2.1
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 26 3.7
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 26 4.9
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 26 4.9
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 4.9
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 25 6.4
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 25 6.4
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 25 6.4
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 25 6.4
SPBC3B9.03 |||signal recognition particle receptor alpha subunit... 25 6.4
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 25 6.4
SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|c... 25 8.5
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 25 8.5
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 25 8.5
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 25 8.5
>SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein
Did4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 31.1 bits (67), Expect = 0.13
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 10/163 (6%)
Query: 29 GVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVLTVLKNNNQPIIRKRQLM 88
G P+E LR Q L ++L+R + E+ L + K N I+ R LM
Sbjct: 11 GKSPQEQLRAHQRSLGRAERELDRERTKLDQRERALIQEIKGSAKAGNTGAARIQARDLM 70
Query: 89 RTHFGDYRAKMASEEKKLSKMTSKIKISEVQEKPKATFFRKSVFQTTGDESFRFNFDLTS 148
R + R KM + + +L ++ +++ E+ + R + TG N +
Sbjct: 71 RLR--NSRKKMMNAKTQLQAISLRLQTMRTSEQMMQS-MRGATRLLTG-----MNKSMNI 122
Query: 149 DQIENGNISTVTEENNKIGNTESVIADDNIQGNSKDHNTEEAN 191
+ I+ E N+I + D+N+ ++ + EEA+
Sbjct: 123 PAM--ARITQQFERENEIMEQRQEMIDENMDDALEEDDEEEAD 163
>SPBC1718.03 |ker1||DNA-directed RNA polymerase I complex subunit
subunit Ker1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 30.3 bits (65), Expect = 0.23
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 47 IQQLERTLNEKKGNEKQLQETWKVLTVLKNNNQPII 82
IQ +ER +EK G+E L + +VL LK P+I
Sbjct: 30 IQTIERFQDEKSGSESVLSQLNRVLMYLKGEEIPLI 65
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 29.5 bits (63), Expect = 0.40
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 47 IQQLERTLNE-KKGNEK---QLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASE 102
IQ LER ++E +K E QLQ+ +++N +P+I + ++ R +++S
Sbjct: 787 IQTLERRISETEKELESYAGQLQDAKNEEHRIRDNQRPVIEEIRIYREKIQTETQRLSSL 846
Query: 103 EKKLSKMTSKIKISEV 118
+ +LS++ + + SEV
Sbjct: 847 QTELSRLRDEKRNSEV 862
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/85 (18%), Positives = 38/85 (44%)
Query: 49 QLERTLNEKKGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSK 108
Q+E+ NE ++++ + + + L++ + M + K S K+S
Sbjct: 450 QIEKRANESNNLQREIADLSEQIVELESKRNDLHSALLEMGGNLTSLLTKKDSIANKISD 509
Query: 109 MTSKIKISEVQEKPKATFFRKSVFQ 133
+ +K+ E ++ K + F K++ Q
Sbjct: 510 QSEHLKVLEDVQRDKVSAFGKNMPQ 534
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 28.3 bits (60), Expect = 0.91
Identities = 24/122 (19%), Positives = 55/122 (45%), Gaps = 10/122 (8%)
Query: 56 EKKGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIKI 115
+ K ++ QET K ++ +P+ R++ D + EE K S ++ ++
Sbjct: 925 DPKSTKRNHQETEKTADTDVSSTEPVKRQKT------ADVNDDVGEEEVKQS-VSEQVDS 977
Query: 116 SEVQEKPKATFFRKSVFQTTGDESFRFNFDLTSD---QIENGNISTVTEENNKIGNTESV 172
+++ +PK+ KS + + D S + T+D N++TV + + + + +
Sbjct: 978 AQLTSEPKSESLPKSPEEKSDDTSNDVTTENTNDINGDSNMDNVATVDKSTDAVDTSTAT 1037
Query: 173 IA 174
+A
Sbjct: 1038 VA 1039
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 27.9 bits (59), Expect = 1.2
Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 8/124 (6%)
Query: 57 KKGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEE----KKLSKMTSK 112
+KGN + T K + +++K ++ + D ++ EE S+
Sbjct: 142 RKGNLVPQSPRRTIATTCKGVLEDVLKKDNELKFNDSDEEDEVDDEEIESFNSFSRKMQT 201
Query: 113 IKISEVQEKPKATFFRKSVFQTTGDESFRFNFDLTSDQIENGNISTVTEENNKIGNTESV 172
I S + PK + Q+ ES R + ++ E G+ EE++ + +ES
Sbjct: 202 ISNSRYRGSPKPNIEK----QSCSSESDRVSQISDDEEDEEGSADEEDEEDSDVELSESS 257
Query: 173 IADD 176
++DD
Sbjct: 258 LSDD 261
>SPBC25B2.06c |btb2||BTB/POZ domain protein Btb2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 284
Score = 27.9 bits (59), Expect = 1.2
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 111 SKIKISEVQEKPKATFFRKSVFQTTGDESFRFNFDLTSDQIENGNISTVTEENNKIGNTE 170
++ K++ K +A+F +++ + GDES FD S I+ +I+ E KI
Sbjct: 222 ARYKLANEIVKMRASFRKQNHIEGKGDESVVLAFDEGSRGIQLVHIAPGAESRRKIWKAT 281
Query: 171 SV 172
SV
Sbjct: 282 SV 283
>SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/74 (18%), Positives = 33/74 (44%)
Query: 72 TVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIKISEVQEKPKATFFRKSV 131
T+ + + ++ R R D+ + ++KKL + ++ + + + + ++
Sbjct: 310 TIREKKVRELLSGRYDFRKVEDDHSTTASDQKKKLIEDVEQLIVDNHLQPVLRSVYTRTA 369
Query: 132 FQTTGDESFRFNFD 145
FQ GD+ R N D
Sbjct: 370 FQIPGDDEVRINLD 383
>SPBC1198.07c |||mannan endo-1,6-alpha-mannosidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 139 SFRFNFDLTSDQIENGNISTVTE 161
+F F+FD+TSD N ++TVT+
Sbjct: 82 AFAFDFDVTSDDSINSALTTVTD 104
>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1274
Score = 27.5 bits (58), Expect = 1.6
Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 3/95 (3%)
Query: 86 QLMRTHFGDYRAKMASEEKKLSKMTSKIKISEVQEKPKATFFRKSVFQTTGDESFRFNFD 145
Q R H+GD + EK + K ++ V F R + T
Sbjct: 922 QKQRVHYGDMYTSSHTLEK--GEYLYKFQLLSVDPSTLERF-RNVTLRLTKKLKKPITLP 978
Query: 146 LTSDQIENGNISTVTEENNKIGNTESVIADDNIQG 180
L +D I+ + T EN G ES + NI+G
Sbjct: 979 LYADHIDFCDNKTYERENIDAGVVESFVVGTNIEG 1013
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 27.1 bits (57), Expect = 2.1
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 100 ASEEKKLSKMTSKIKISEVQEKPKATFFRKSVFQTTGDESFRFNFDL-TSDQIENGNIST 158
A +E K + SK + ++ KP+ T ++ +TG F N TSD N +
Sbjct: 204 AWKESKAKQEASKKEEHKLNTKPQVTAKDQNAMPSTGISGFEINRQKDTSDMKRNNRVHM 263
Query: 159 VTEENNKIGNTE 170
E+ + N E
Sbjct: 264 DDEDGPRRMNLE 275
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 26.2 bits (55), Expect = 3.7
Identities = 35/180 (19%), Positives = 74/180 (41%), Gaps = 9/180 (5%)
Query: 12 KSTSLQKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVL 71
K ++ Q+P I+K+ S V ++ F + + + KQL + K
Sbjct: 27 KKSTYQRPSFIEKNHSSSVTASQASLAFNTSEKLFVNENAEERKNSRDLRKQLPDRPKFK 86
Query: 72 TVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIKISEVQEKPKATFFRKSV 131
+ NN+ ++ + R F + ++ + E L +++ +KI + P K
Sbjct: 87 KRIPNNDSWVVVFTKKNRYFFHNLKSHESYWEPPL-EISKDLKILRL---PIRKQISKDS 142
Query: 132 FQTTGDESFRFNFDLTSDQIENGNISTVTEENNKI--GNTESVIADDNIQGNSKDHNTEE 189
Q+ +S + N + + E+ ++ T EE + + + ESV+ + S + EE
Sbjct: 143 SQSQNVDSGKTNHE---EIHESRHLQTEIEEPSGLEESSEESVLYSEEFYEKSDEEEDEE 199
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 25.8 bits (54), Expect = 4.9
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 3/110 (2%)
Query: 3 KPTRLHNKGKSTSLQKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEK 62
K + + K + T +D SE D E +L +++LE E+K +
Sbjct: 130 KNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQL---LRELENIKQERKREQM 186
Query: 63 QLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSK 112
+E + L K + L + G ++ K +E + + T K
Sbjct: 187 LQEEKNRALEQEKREREIAFGNELLNKASSGSFQVKRRWDEDVVFRNTHK 236
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 25.8 bits (54), Expect = 4.9
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 111 SKIKISEVQEKPKATFFRKSVFQTTGDESFRFNFDLTSDQIENGNISTVTEENNKIGNTE 170
SK+K+S E P K F + E F+ + S + E+ ++ + K+ + +
Sbjct: 368 SKVKLSWDAEDPHRKDLIKKAFTSQDIEDLDFSAYIASSESEDEDVDVIRSRYQKLLSGD 427
Query: 171 SVIADDNIQGNSKDHNTEE 189
+ D+ Q NS ++
Sbjct: 428 A----DDFQANSNPFEDDD 442
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 25.8 bits (54), Expect = 4.9
Identities = 26/109 (23%), Positives = 47/109 (43%)
Query: 13 STSLQKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVLT 72
S SL++ K+++ S + L+Q + EL E T+N + L+ K L
Sbjct: 1030 SESLKRVKKLERENSTLISDVSILKQQKEELSVLKGVQELTINNLEEKVNYLEADVKQLP 1089
Query: 73 VLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIKISEVQEK 121
LK + + K QL + + A ++ L+ + S K E +E+
Sbjct: 1090 KLKKELESLNDKDQLYQLQATKNKELEAKVKECLNNIKSLTKELENKEE 1138
Score = 25.4 bits (53), Expect = 6.4
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 51 ERTLNEKKG-NEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKM 109
+ L EK EK L +T L L+ NN ++ ++ + + +++ +L K+
Sbjct: 938 QNELKEKLSLEEKDLLDTKGELESLRENNATVLSEKAEFNEQCKSLQETIVTKDAELDKL 997
Query: 110 TSKIK--ISEVQE 120
T I +E+QE
Sbjct: 998 TKYISDYKTEIQE 1010
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 25.4 bits (53), Expect = 6.4
Identities = 19/96 (19%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 27 SEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVLTVLKNNNQPIIRKRQ 86
S+ + E+ Q++ +L LE++ N+ G + + ++ + L+N+ Q +++
Sbjct: 790 SKMAELEKEFNQYKHKLDEFTPILEKSENDYNGVKLECEQ---LEGELQNHQQSLVQGES 846
Query: 87 ---LMRTHFGDYRAKMASEEKKLSKMTSKIKISEVQ 119
L++T + + +EE K+T I+I +
Sbjct: 847 TTSLIKTEIAELELSLVNEEHNRKKLTELIEIESAK 882
>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 625
Score = 25.4 bits (53), Expect = 6.4
Identities = 17/58 (29%), Positives = 22/58 (37%)
Query: 133 QTTGDESFRFNFDLTSDQIENGNISTVTEENNKIGNTESVIADDNIQGNSKDHNTEEA 190
QT E + + D D E N T N I S++ SKDH T +A
Sbjct: 238 QTAAFEEYDDDDDDDVDDNEQSNSMIETSANADITPKASLLPSTTESSISKDHETSQA 295
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.4 bits (53), Expect = 6.4
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 9 NKGKSTSLQKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETW 68
+K STS +K ++ K+ + D E + Q LEL IQQLER NE N+ +E
Sbjct: 408 HKHHSTS-EKLEELSKYVASIQDKERNNGQNALELQARIQQLERR-NEDMYNKLLAEEII 465
Query: 69 K-----VLTVLKNNNQPIIRKRQLMRTHFGDY 95
+ + LK N + R R L+ + +Y
Sbjct: 466 RRKLHNDIQELKGNIRVFCRVRPLLPSEESEY 497
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 25.4 bits (53), Expect = 6.4
Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
Query: 6 RLHNKGKSTSLQKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQ 65
R++N +K K+ K ++ EE +RQ + E ++ ++ EKK E++
Sbjct: 66 RIYNGSAEAGKEK--KLQKQRAQ----EERIRQKEAERLKREKERQQREQEKKLREQEKI 119
Query: 66 ETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIKISEVQEKPKAT 125
K+ + K + I + Q R D + + E ++L + +I E Q+
Sbjct: 120 AAKKMKELEKLEKERIRLQEQQRRKEERDQKLREKEEAQRLRQ--EQILNKERQQLKLNN 177
Query: 126 FFRKSV 131
FF K V
Sbjct: 178 FFTKGV 183
>SPBC3B9.03 |||signal recognition particle receptor alpha subunit
Srp101|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 25.4 bits (53), Expect = 6.4
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 8/91 (8%)
Query: 103 EKKLSKMTSKIKISEVQEKPKATFFRKSVFQTTGDESFRFNFDL----TSDQIENGNIST 158
E ++ K ++ K + +K K RK Q T +E N+ S ++N +S+
Sbjct: 148 EYEMKKKGAQSKQTNAPKKGKKQL-RKWDDQITEEEQAALNYSSQASSASQTVDNSQLSS 206
Query: 159 VTEENNKI---GNTESVIADDNIQGNSKDHN 186
+ NNK G+ + +I+D + N N
Sbjct: 207 IVGNNNKFQKTGSGDVIISDLEMDPNQTISN 237
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 147 TSDQIENGNISTVTEENNKIGNTESVIADDNIQGNSK 183
++D N N+S T+E T S I D+++ +SK
Sbjct: 794 SADNSNNTNVSFQTDETQTEDETMSDIHPDDVENHSK 830
>SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 436
Score = 25.0 bits (52), Expect = 8.5
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 151 IENGNISTVTEE----NNKIGNTESVIADDNIQGNSKDHNTEEAN 191
+EN I V EE ++ GN + + +D N D N +E N
Sbjct: 20 LENETIFNVQEEMEEDGSESGNIQKTLLEDPCPENVNDENEDEQN 64
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 25.0 bits (52), Expect = 8.5
Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Query: 78 NQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIKISEVQEKPKATFFRKSVFQTTGD 137
N P L THF S+ ++ K K +++ ++K FR Q
Sbjct: 1246 NDPSAYSNMLEATHFELSTTSSTSDSNEIEKTQEKKRLALEKQKKIMQQFRD---QQASF 1302
Query: 138 ESFRFNFDLTSDQIENGNISTVTEENNK 165
+ +FD+ DQ E+ + EE K
Sbjct: 1303 LAQNTDFDIGEDQTEDEVTTEEPEEEVK 1330
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.0 bits (52), Expect = 8.5
Identities = 19/126 (15%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Query: 12 KSTSLQKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVL 71
K L+K + + + +D ES + Q +L +++ ++ QL+++ ++
Sbjct: 724 KLNDLEKSLVLSERSKDELD--ESYKSLQEQLASKKIEVQNVSSQLSICNSQLEQSNHIV 781
Query: 72 TVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIKISEVQEKPKATFFRKSV 131
LK+ N + + ++ + +K++S ++ M ++I+ S + +
Sbjct: 782 DNLKSENLLLTSVKDKLKADLSNLESKLSSLQQDNFHMKAQIESSNQEYTATVDSMNSRI 841
Query: 132 FQTTGD 137
+ + D
Sbjct: 842 LELSND 847
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 25.0 bits (52), Expect = 8.5
Identities = 27/149 (18%), Positives = 60/149 (40%), Gaps = 4/149 (2%)
Query: 47 IQQLERTLNEKKGNEKQLQE-TWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKK 105
+ LE+ +NEK N ++L E ++ L + K Q +R + + + E +
Sbjct: 988 LSNLEKAINEKNLNIRELNEKLMRLDDELLLKQRSYDTKVQELREENASLKDQCRTYESQ 1047
Query: 106 LSKMTSKIKISEVQ---EKPKATFFRKSVFQTTGDESFRFNFDLTSDQIENGNISTVTEE 162
L+ + SK +E + ++ + F+K + + F + I + + +
Sbjct: 1048 LASLVSKYSETESELNKKEAELVIFQKEITEYRDQLHKAFQNPEKTHNINDVKSGPLNSD 1107
Query: 163 NNKIGNTESVIADDNIQGNSKDHNTEEAN 191
N + + ++ K +T+EAN
Sbjct: 1108 ENIYSTSSTTLSILKDVQELKSLHTKEAN 1136
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 7 LHNKGKSTSLQKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKK 58
LH K + ++ +I + + + EE LR+ ELC I+ L+ + +++
Sbjct: 1130 LHTKEANQLSERIKEISEMLEQSIATEEKLRRKNSELCDIIEALKYQIQDQE 1181
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.310 0.126 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 966,234
Number of Sequences: 5004
Number of extensions: 40437
Number of successful extensions: 127
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 109
Number of HSP's gapped (non-prelim): 30
length of query: 216
length of database: 2,362,478
effective HSP length: 70
effective length of query: 146
effective length of database: 2,012,198
effective search space: 293780908
effective search space used: 293780908
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 52 (25.0 bits)
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