GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000122-TA|BGIBMGA000122-PA|undefined
         (216 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   1.3  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   3.0  
DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    24   4.0  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   4.0  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   7.0  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   7.0  
AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase p...    23   7.0  
AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.         23   7.0  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 22/116 (18%), Positives = 51/116 (43%), Gaps = 2/116 (1%)

Query: 8   HNKGKSTSLQKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQET 67
           H + +   LQ+  ++++  S     +E L++   +L    Q +++   E   NE+QLQ+ 
Sbjct: 713 HTQQRREQLQR--ELNELNSAYAKEDERLQEMTRKLHQRQQHMKKLQQELLTNEQQLQQL 770

Query: 68  WKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIKISEVQEKPK 123
             V+   +     +  + +  RT     +  +  E+ KL ++   ++  E   + K
Sbjct: 771 AGVVFEGETEETTLREELEHSRTILAKLQKGIEEEQAKLDQVRRTVQQEEQTAQAK 826


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 6/63 (9%)

Query: 49  QLERTLNEKKGNEKQLQETWKVLTVLKNNN--QPIIRKRQ----LMRTHFGDYRAKMASE 102
           +L   +++ K N   +QE  +++T+ KN N  Q   R++Q     MR H+   + ++  +
Sbjct: 861 ELLEIISDFKNNVFSIQEVEQLVTLWKNRNDVQKSFREKQDQLARMREHYEQIQRELKDK 920

Query: 103 EKK 105
            K+
Sbjct: 921 LKR 923


>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query: 1   MPKPTRLHNKGKSTSLQKP 19
           +P P  +HN G S SL  P
Sbjct: 84  LPGPMTIHNNGHSVSLSIP 102


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 29/142 (20%), Positives = 61/142 (42%), Gaps = 11/142 (7%)

Query: 22  IDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKV-LTVLKNNNQP 80
           I +HE E  D    L+Q +  +   + ++++T   K+G  K   E  +  + ++K+    
Sbjct: 690 IQEHEKELADFRAELKQTEANINSIVSEMQKT-ETKQGKSKDAFEKIQADIRLMKDELSR 748

Query: 81  IIRKRQLMRTHFGDYRAK---MASEEKKLSKMTSKIKISE--VQEKPKATFFRKSV--FQ 133
           I R R          +A    M S ++ L     +  +S+  VQ++ +       +    
Sbjct: 749 IERFRSPKERSLAQCKANLEAMTSTKEGLENELHQELMSQLSVQDQHEVDSLNDEIRRLN 808

Query: 134 TTGDESF--RFNFDLTSDQIEN 153
               E+F  R + ++T +++EN
Sbjct: 809 QENKEAFTSRMSLEVTKNKLEN 830


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 149 DQIENGNISTVTEENNKIG-NTESVIADDNIQGNSKDH 185
           D + N + +     NN  G N  + I+ +N   NS  H
Sbjct: 190 DSLPNASSNNSNNNNNSSGNNNNNTISSNNNNNNSLHH 227


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 144 FDLTSDQIE--NGNISTVTEENNKIGNTESVIADDNIQGNSKDHNTEEAN 191
           FD +S + +    N+   TE+ N+I N++  +    I G  K  +   AN
Sbjct: 866 FDSSSTKADAMQKNVDRYTEQINEITNSKVKVLQTKINGLGKQIDKLSAN 915


>AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase
           protein.
          Length = 557

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 7/25 (28%), Positives = 16/25 (64%)

Query: 154 GNISTVTEENNKIGNTESVIADDNI 178
           G I  + ++ +++ NTES+   D++
Sbjct: 182 GIIGVIADKTHELSNTESITFSDSV 206


>AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.
          Length = 557

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 7/25 (28%), Positives = 16/25 (64%)

Query: 154 GNISTVTEENNKIGNTESVIADDNI 178
           G I  + ++ +++ NTES+   D++
Sbjct: 182 GIIGVIADKTHELSNTESITFSDSV 206


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.310    0.126    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,585
Number of Sequences: 2123
Number of extensions: 7043
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 8
length of query: 216
length of database: 516,269
effective HSP length: 61
effective length of query: 155
effective length of database: 386,766
effective search space: 59948730
effective search space used: 59948730
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 46 (22.6 bits)