Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000122-TA|BGIBMGA000122-PA|undefined
(216 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80437-15|AAB37627.1| 445|Caenorhabditis elegans Mus (drosophil... 34 0.089
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 33 0.12
Z50794-6|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical pr... 32 0.27
AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha ... 32 0.27
Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical pr... 32 0.36
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 31 0.63
AF099913-8|ABB51194.1| 301|Caenorhabditis elegans Hypothetical ... 31 0.63
Z49127-5|CAA88945.1| 421|Caenorhabditis elegans Hypothetical pr... 30 1.1
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 30 1.1
Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical p... 30 1.5
Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical p... 30 1.5
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 30 1.5
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 30 1.5
U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL021572-1|CAA16516.2| 654|Caenorhabditis elegans Hypothetical ... 29 1.9
U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical p... 29 2.5
U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical pr... 29 2.5
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 29 2.5
Z78200-4|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 29 3.4
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 29 3.4
AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical ... 29 3.4
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical pr... 28 4.4
U40419-3|AAK67216.3| 260|Caenorhabditis elegans Hypothetical pr... 28 4.4
AF016438-2|AAQ62455.1| 407|Caenorhabditis elegans Hypothetical ... 28 4.4
AF003145-9|AAT68904.1| 585|Caenorhabditis elegans Hypothetical ... 28 4.4
AF003145-8|AAB57721.2| 700|Caenorhabditis elegans Hypothetical ... 28 4.4
Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical pr... 28 5.9
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 28 5.9
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 28 5.9
AL132951-5|CAC44307.1| 426|Caenorhabditis elegans Hypothetical ... 28 5.9
AC024801-3|AAK68511.3| 852|Caenorhabditis elegans Hypothetical ... 28 5.9
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 28 5.9
Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z78543-2|CAB01752.1| 369|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z75533-1|CAA99815.1| 423|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z71261-5|CAA95800.1| 186|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 27 7.8
>U80437-15|AAB37627.1| 445|Caenorhabditis elegans Mus (drosophila
mutagen sensitive)related protein 81, isoform a protein.
Length = 445
Score = 33.9 bits (74), Expect = 0.089
Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 9/154 (5%)
Query: 34 ESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFG 93
E+LR+ E+ I L+ + +L+ETW V N P +R + T
Sbjct: 45 ENLRKCPFEIL-TIVDLKNVQGIGENIALKLEETWNVACRENNGQDPTLRSIKKFTT--D 101
Query: 94 DYRAKMASEEKKLSKMTSKIKISEVQEKPKATFFRKSVFQTTGDESFRFNFDLTSDQIEN 153
DYR + + K ++ K E Q+ K ++ F++ GD+ + + LT + ++
Sbjct: 102 DYR-RFLTNRKSTTERMKDAKRLEKQKSTKTIVDIENEFESDGDDDKQPSVPLT--KTKS 158
Query: 154 GNISTVTEEN---NKIGNTESVIADDNIQGNSKD 184
+S + + ++ GN S + + NS D
Sbjct: 159 FQVSKPVQPSLIRSQSGNLSSSSSTSSSSSNSSD 192
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 47 IQQLERTLNEKKGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKL 106
+ LE+ L+ K EK++Q K L +K IR+ + + F +YR K +E++L
Sbjct: 337 VTALEKKLHNK---EKEVQTLTKELDQVKTETNDKIRRLTEVTSEFAEYRKKFQQQEEEL 393
Query: 107 SKMTSKIKISEVQEK 121
+ + + E ++
Sbjct: 394 RRKARLLTVVEAAKE 408
Score = 29.9 bits (64), Expect = 1.5
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 10/131 (7%)
Query: 48 QQLERTLNEKKGNEKQLQE-TWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKL 106
+QLE+ ++ + + L E T K L K + +R ++ +++ +E++
Sbjct: 599 KQLEKEISHTEDRNRLLHENTQKELEAHKETHTETVR---VLEAEIDQFKSAFENEQEYG 655
Query: 107 SKMTSKIKISEVQEKPKATFFRKSVFQTTGDESFRFNFDLTSDQIE--NGNISTVTEE-- 162
+ ++KI+ E Q K + K E+F + D +++E N NI + +E
Sbjct: 656 KEKSAKIRELEAQNKTLLSEMEKVKHVAENLEAFTSDKDNLLEELESKNKNIEHLKQEIA 715
Query: 163 --NNKIGNTES 171
N KI E+
Sbjct: 716 QLNEKISTKET 726
>Z50794-6|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical
protein F59F5.6 protein.
Length = 1139
Score = 32.3 bits (70), Expect = 0.27
Identities = 27/136 (19%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 34 ESLRQFQLELCWCIQQLE---RTLNEKKGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRT 90
ES + QL L +Q L+ R + G +K + ++ L+ +N+ + ++ + +R
Sbjct: 447 ESNDRLQLHLKERMQALDDKNRLTQQLDGTKKIYDQAERIKDRLQRDNESLRQEIEALRQ 506
Query: 91 HFGDYRAKMASEEKKLSKMTSKIKISEVQEKPKATFFRKSVFQTTGDESFRFNFDLTSDQ 150
Y A+ A + ++ + + VQ++P+A+ ++S +Q + + + +
Sbjct: 507 QL--YNARTAQFQSRMHAIPFTHAQNIVQQQPQASIAQQSAYQMYKQQPAQQYQTVGMRR 564
Query: 151 IENGNISTVTEENNKI 166
G IS + ++ NK+
Sbjct: 565 PNKGRISALQDDPNKV 580
>AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha
homolog SYD-2 protein.
Length = 1139
Score = 32.3 bits (70), Expect = 0.27
Identities = 27/136 (19%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Query: 34 ESLRQFQLELCWCIQQLE---RTLNEKKGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRT 90
ES + QL L +Q L+ R + G +K + ++ L+ +N+ + ++ + +R
Sbjct: 447 ESNDRLQLHLKERMQALDDKNRLTQQLDGTKKIYDQAERIKDRLQRDNESLRQEIEALRQ 506
Query: 91 HFGDYRAKMASEEKKLSKMTSKIKISEVQEKPKATFFRKSVFQTTGDESFRFNFDLTSDQ 150
Y A+ A + ++ + + VQ++P+A+ ++S +Q + + + +
Sbjct: 507 QL--YNARTAQFQSRMHAIPFTHAQNIVQQQPQASIAQQSAYQMYKQQPAQQYQTVGMRR 564
Query: 151 IENGNISTVTEENNKI 166
G IS + ++ NK+
Sbjct: 565 PNKGRISALQDDPNKV 580
>Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical
protein C17E4.2 protein.
Length = 819
Score = 31.9 bits (69), Expect = 0.36
Identities = 32/163 (19%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 26 ESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVLTVLKNNNQPIIRKR 85
E + + E+ + L+ ++ ++ + +EK+ K L++++ N + + K
Sbjct: 558 EEDDSEDEDDHSKLNLDADSVVKTMQDMMKLLIESEKKFSMVTKQLSMVQQNRESLNEKL 617
Query: 86 QLMRTHFGDYRAKMASEEKKLSKMTSKIKISEVQEKPKATFFRKSVFQTTGDESFRFNFD 145
+ R + A + E+K ++T K+K E K VF+ T + + N
Sbjct: 618 TVARENVKSEAAMKSHLEQKYKRLTLKMKNLEAAMTLKLELESLKVFEET--KKIQEN-- 673
Query: 146 LTSDQIENGNISTVTEENNKI-GNTESVIADD-NIQGNSKDHN 186
+ N I+ + +EN++I E ++A + N++ S + N
Sbjct: 674 ---HRAANAQINKLVDENSQIVHKLEQIVAKNINLEKKSAELN 713
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 31.1 bits (67), Expect = 0.63
Identities = 36/179 (20%), Positives = 73/179 (40%), Gaps = 9/179 (5%)
Query: 10 KGKSTSLQKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWK 69
+ K L++ + ++ E ++ Q QLE +ERTLN+K EKQ E
Sbjct: 1729 EAKIAQLEEELEEEQSNCELAIDKQRKAQVQLEQITTDLSMERTLNQKTEAEKQSLE--- 1785
Query: 70 VLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIKISEVQEKPKATFFRK 129
++N + +L RA+MA+ E K+ + ++ + E QEK A +
Sbjct: 1786 -----RSNRDYKAKITELESGAQSRARAQMAALEAKVQYLEDQLNV-EGQEKTAANRAAR 1839
Query: 130 SVFQTTGDESFRFNFDLTSDQIENGNISTVTEENNKIGNTESVIADDNIQGNSKDHNTE 188
+ + D + +F + +++ + +N + D+ + +K N +
Sbjct: 1840 RLEKRLNDTTQQFEDEKRANEQAKELLEKSNLKNRNLRRQLDEAEDEMSRERTKHRNVQ 1898
>AF099913-8|ABB51194.1| 301|Caenorhabditis elegans Hypothetical
protein C29F9.4 protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.63
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 48 QQLERTLNEKKGNEKQLQETWKVLTVLKNN-NQPIIRKRQLMRTHFGDYRAKMASEEKKL 106
+Q ER + K E+QL+E K++ + KN+ +K+Q+++ H +R +K++
Sbjct: 47 EQAERKMLRLK-QEEQLEEVMKLIEITKNSLKMDFQKKKQILKQHAEKWRMLKEQHKKEI 105
Query: 107 SK 108
+
Sbjct: 106 EE 107
>Z49127-5|CAA88945.1| 421|Caenorhabditis elegans Hypothetical
protein F13D12.5 protein.
Length = 421
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 134 TTGDESFRFNFDLTSDQIENGNISTVTEENNKIGNTESVIADDNIQGNSK 183
T ++S +N +T + NG + IG+ ES+ +D +G +K
Sbjct: 92 TVTEDSLTYNIKITDLHMSNGFEKNSGKREENIGSRESIYREDGARGKAK 141
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 50 LERTLNEKKGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKM 109
LE TL E+K K+ E K KN ++KR + ++ M S+ KL++
Sbjct: 113 LEETLEEEKEKNKKRDEASKKTLNSKNEEIEHLKKRVISLSNSQSENETMKSKISKLTES 172
Query: 110 TSKIK 114
K+K
Sbjct: 173 EKKLK 177
>Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical
protein Y49E10.23b protein.
Length = 743
Score = 29.9 bits (64), Expect = 1.5
Identities = 35/147 (23%), Positives = 57/147 (38%), Gaps = 12/147 (8%)
Query: 21 KIDKHESEGVDPEESLRQFQLELCWCIQQLERTL---NEKKGNEKQLQETWKVLTVLKNN 77
+I++ E E EE Q +LE +Q+E+ L E +LQ K +
Sbjct: 356 RIEETEKERETAEEDREQAELEAAEYREQVEKMLKLTQELTERNMELQRKLKDEEGKNTS 415
Query: 78 NQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIKISEVQEKPKATFFRKSVFQTTGD 137
+ I K Q+ T S E S + +KISE E K + ++ +
Sbjct: 416 HNSTIEKLQVELT---------TSLELCKSFEETNLKISEELENLKTEMQKPVTLESLEE 466
Query: 138 ESFRFNFDLTSDQIENGNISTVTEENN 164
+R +D S ++E E+NN
Sbjct: 467 NFYRDKYDEASRKLEQTEAKLAEEKNN 493
>Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical
protein Y49E10.23a protein.
Length = 734
Score = 29.9 bits (64), Expect = 1.5
Identities = 35/147 (23%), Positives = 57/147 (38%), Gaps = 12/147 (8%)
Query: 21 KIDKHESEGVDPEESLRQFQLELCWCIQQLERTL---NEKKGNEKQLQETWKVLTVLKNN 77
+I++ E E EE Q +LE +Q+E+ L E +LQ K +
Sbjct: 356 RIEETEKERETAEEDREQAELEAAEYREQVEKMLKLTQELTERNMELQRKLKDEEGKNTS 415
Query: 78 NQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIKISEVQEKPKATFFRKSVFQTTGD 137
+ I K Q+ T S E S + +KISE E K + ++ +
Sbjct: 416 HNSTIEKLQVELT---------TSLELCKSFEETNLKISEELENLKTEMQKPVTLESLEE 466
Query: 138 ESFRFNFDLTSDQIENGNISTVTEENN 164
+R +D S ++E E+NN
Sbjct: 467 NFYRDKYDEASRKLEQTEAKLAEEKNN 493
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 29.9 bits (64), Expect = 1.5
Identities = 34/169 (20%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 22 IDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQ-LQETWKVLTVLKNNNQP 80
+ +H+ E + +++L+ + +L QQ + +E++ N+KQ + + K L + K + +
Sbjct: 775 MQRHKWEITNKDQTLKHLETQLDEIKQQSKIESSEQESNDKQTIADLRKKLDLEKAHKKA 834
Query: 81 IIR-------KRQ-LMRTHFGDYRAKMASEEKKL-------SKMTSKIKISEVQEKPKAT 125
+I KRQ L + G ++ + +E+++ M+ +I + +A
Sbjct: 835 VINKLEEEMAKRQPLKKGEKGVTKSALIKKEREIMALEQERDTMSKRIAALFYENDKQAE 894
Query: 126 FFRKSV--FQTTGDESFRFNFDLTSDQIENGNISTVTEENNKIGNTESV 172
F ++ QTT D + R +++ N N++T E+ + + E +
Sbjct: 895 HFNIAIQDMQTTQD-ALRDELKECKEELANRNVNTRYEDKRSLDSREGI 942
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 29.9 bits (64), Expect = 1.5
Identities = 34/169 (20%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 22 IDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQ-LQETWKVLTVLKNNNQP 80
+ +H+ E + +++L+ + +L QQ + +E++ N+KQ + + K L + K + +
Sbjct: 775 MQRHKWEITNKDQTLKHLETQLDEIKQQSKIESSEQESNDKQTIADLRKKLDLEKAHKKA 834
Query: 81 IIR-------KRQ-LMRTHFGDYRAKMASEEKKL-------SKMTSKIKISEVQEKPKAT 125
+I KRQ L + G ++ + +E+++ M+ +I + +A
Sbjct: 835 VINKLEEEMAKRQPLKKGEKGVTKSALIKKEREIMALEQERDTMSKRIAALFYENDKQAE 894
Query: 126 FFRKSV--FQTTGDESFRFNFDLTSDQIENGNISTVTEENNKIGNTESV 172
F ++ QTT D + R +++ N N++T E+ + + E +
Sbjct: 895 HFNIAIQDMQTTQD-ALRDELKECKEELANRNVNTRYEDKRSLDSREGI 942
>U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical
protein C32E12.1 protein.
Length = 552
Score = 29.9 bits (64), Expect = 1.5
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 12 KSTSLQKPCKIDKHESEGVDPEES--LRQFQLELCWCIQQLERTL-NEKKGNEKQLQETW 68
KS +K K K + DP S L Q Q+L + L N + K+++E
Sbjct: 114 KSKDEKKKKKNSKGKKPSTDPLFSGPLTQAPKRSKGETQELNQLLENNAQNKPKKVKEPS 173
Query: 69 KVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIKISEVQEKPK 123
+ + ++ ++ K QL GD ++ ++EKK +K T +I + EV+E+ K
Sbjct: 174 GIDAIDLKSDSLVVEKTQLS----GDSALRVTAKEKKKTKKT-EIVVKEVKEEKK 223
>AL021572-1|CAA16516.2| 654|Caenorhabditis elegans Hypothetical
protein W06H3.1 protein.
Length = 654
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/98 (22%), Positives = 44/98 (44%)
Query: 10 KGKSTSLQKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWK 69
K K L+K + V PE ++ EL ++++ +EK + Q+
Sbjct: 350 KKKEDLLEKLRLETNAKQAAVIPEFDKKKLDAELARATAEIQKKYDEKLKEVVRTQKQLY 409
Query: 70 VLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLS 107
+ K+ ++ ++++R L + G A++A EK LS
Sbjct: 410 DIEHAKDVDEAVLKERNLHSSAVGKALAQLAGIEKALS 447
>U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical
protein ZK546.14b protein.
Length = 454
Score = 29.1 bits (62), Expect = 2.5
Identities = 24/112 (21%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 3 KPTRLHNKGKSTSLQKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEK 62
K ++ KGK P K+ +E + E+ L++ + +L + +R EKKG E
Sbjct: 228 KEMKVERKGKG-----PAKVTSAMAEKMAEEKRLKRRESKL----KLKQRRAEEKKGKEA 278
Query: 63 QLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIK 114
Q + + +N N+P+ ++Q F + + ++ ++++ K + K
Sbjct: 279 AAQVKKETVESTENGNEPV--EKQKSGISFNNLKFEIKEDKQRGKKQRTAKK 328
>U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical
protein ZK546.14a protein.
Length = 472
Score = 29.1 bits (62), Expect = 2.5
Identities = 24/112 (21%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 3 KPTRLHNKGKSTSLQKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEK 62
K ++ KGK P K+ +E + E+ L++ + +L + +R EKKG E
Sbjct: 246 KEMKVERKGKG-----PAKVTSAMAEKMAEEKRLKRRESKL----KLKQRRAEEKKGKEA 296
Query: 63 QLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIK 114
Q + + +N N+P+ ++Q F + + ++ ++++ K + K
Sbjct: 297 AAQVKKETVESTENGNEPV--EKQKSGISFNNLKFEIKEDKQRGKKQRTAKK 346
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 29.1 bits (62), Expect = 2.5
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 26 ESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVLTVLK--NNNQPIIR 83
E G DP +L+ L+L I+Q LN++K +K++ E + K NN + +
Sbjct: 407 EVPGQDPTMTLQMRILQLEHSIEQ----LNDEKEKQKKVMEELQFTIEQKDENNGEVLSE 462
Query: 84 KRQLMRTHFGDYRAKMASEEKKL 106
+L FG R ++ EK++
Sbjct: 463 LNRLKDAKFGSAREEITRLEKQM 485
>Z78200-4|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4 protein.
Length = 1298
Score = 28.7 bits (61), Expect = 3.4
Identities = 25/131 (19%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 61 EKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIKISEVQE 120
E Q E +++ LK + K + + T + ++ ++ EK+L + +K+K++E +
Sbjct: 718 EGQANELQRIVKELKE----VREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQ 773
Query: 121 KPKATFFRKSVFQTTGDESFRFNFDLTSDQIENGNISTVTEENNKIGNTESVIADDNIQG 180
+ +++ T + R+ L S+ + +S TE K+ + + +G
Sbjct: 774 TDVGVI--QQLYEQTEENEKRYE-QLVSESDSSDGLS-YTELRKKVEDKDEEYRKIVQEG 829
Query: 181 NSKDHNTEEAN 191
+EE N
Sbjct: 830 EELQKCSEERN 840
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.7 bits (61), Expect = 3.4
Identities = 25/131 (19%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 61 EKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIKISEVQE 120
E Q E +++ LK + K + + T + ++ ++ EK+L + +K+K++E +
Sbjct: 718 EGQANELQRIVKELKE----VREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQ 773
Query: 121 KPKATFFRKSVFQTTGDESFRFNFDLTSDQIENGNISTVTEENNKIGNTESVIADDNIQG 180
+ +++ T + R+ L S+ + +S TE K+ + + +G
Sbjct: 774 TDVGVI--QQLYEQTEENEKRYE-QLVSESDSSDGLS-YTELRKKVEDKDEEYRKIVQEG 829
Query: 181 NSKDHNTEEAN 191
+EE N
Sbjct: 830 EELQKCSEERN 840
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/66 (19%), Positives = 31/66 (46%)
Query: 47 IQQLERTLNEKKGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKL 106
+Q L R K+ N+K+ +TW V+ +N++ + + F D + + + +
Sbjct: 3506 LQLLSRQFKSKRKNKKKRTKTWSVIGCDENDDSTKCMQHNKLLEEFRDLKKSLITRQLDE 3565
Query: 107 SKMTSK 112
+T++
Sbjct: 3566 KMITAR 3571
>AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical
protein Y39D8B.1 protein.
Length = 1372
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 77 NNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIKISEVQEKPKATFFRKSVFQTTG 136
N QP+ RQ + +GDY+ +KL K S ++ E+ A + + + G
Sbjct: 1248 NGQPMYFTRQNVSEMYGDYKTSKIDSMEKLHKSMSAAQMHEMNSTGYAIMSSQQISEFYG 1307
Query: 137 DES 139
S
Sbjct: 1308 PGS 1310
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
protein T28C6.9 protein.
Length = 1861
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/83 (20%), Positives = 40/83 (48%)
Query: 21 KIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVLTVLKNNNQP 80
++D++E + +E L+Q ++ +Q E E G + ET ++ +K+
Sbjct: 167 RVDEYEEAAEEKDEDLKQSTWDVETLTRQNEALRVELDGVRQGFHETRELADEVKHLRSE 226
Query: 81 IIRKRQLMRTHFGDYRAKMASEE 103
+ R++++ R F +M ++E
Sbjct: 227 LQRQQEIHRAQFDAACREMDADE 249
>Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/92 (19%), Positives = 40/92 (43%)
Query: 12 KSTSLQKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVL 71
++ S Q + + E + EE L++ + + ++E+ +KK +++ + K
Sbjct: 502 EALSAQLQSVVSSSQEEALKKEEELKKLKATVELQQAEIEKMHEDKKEADQKFKNLEKEY 561
Query: 72 TVLKNNNQPIIRKRQLMRTHFGDYRAKMASEE 103
++ +P I+ R YR K A E+
Sbjct: 562 AAYRDEQRPEIKTELERRYEEAKYRLKNALEK 593
>Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical
protein C14H10.2b protein.
Length = 412
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/92 (19%), Positives = 40/92 (43%)
Query: 12 KSTSLQKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVL 71
++ S Q + + E + EE L++ + + ++E+ +KK +++ + K
Sbjct: 168 EALSAQLQSVVSSSQEEALKKEEELKKLKATVELQQAEIEKMHEDKKEADQKFKNLEKEY 227
Query: 72 TVLKNNNQPIIRKRQLMRTHFGDYRAKMASEE 103
++ +P I+ R YR K A E+
Sbjct: 228 AAYRDEQRPEIKTELERRYEEAKYRLKNALEK 259
>Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/92 (19%), Positives = 40/92 (43%)
Query: 12 KSTSLQKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVL 71
++ S Q + + E + EE L++ + + ++E+ +KK +++ + K
Sbjct: 502 EALSAQLQSVVSSSQEEALKKEEELKKLKATVELQQAEIEKMHEDKKEADQKFKNLEKEY 561
Query: 72 TVLKNNNQPIIRKRQLMRTHFGDYRAKMASEE 103
++ +P I+ R YR K A E+
Sbjct: 562 AAYRDEQRPEIKTELERRYEEAKYRLKNALEK 593
>U40419-3|AAK67216.3| 260|Caenorhabditis elegans Hypothetical
protein C27F2.9 protein.
Length = 260
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/76 (21%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 20 CKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVLTVLKNNNQ 79
C I++H+++ + +E L+++ I ++ +K + ++ TW+ V N+
Sbjct: 37 CNIERHDAQELTQKEFLKRYAYSEPVIIYNIDNDEFQKLTEKAEMLSTWRDADVTLNSAN 96
Query: 80 PIIRKRQLMRTHFGDY 95
R + T FG+Y
Sbjct: 97 TYSYTR--VPTTFGNY 110
>AF016438-2|AAQ62455.1| 407|Caenorhabditis elegans Hypothetical
protein F44C8.9a protein.
Length = 407
Score = 28.3 bits (60), Expect = 4.4
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
Query: 22 IDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVLTVLKNNNQPI 81
IDKH + V+ L +EL + + QL KK + L+ T K+L + +N
Sbjct: 291 IDKHWRQPVEDLVKLNPTDMELNFMLIQLCLNDAGKKFQGRVLEATDKLLQINADNLHNY 350
Query: 82 IRKRQLMRTHFGDYRAKMASE---EKKLSKMTSKIKISEVQEKPKATFFRKSVFQTT 135
K+ M ++ G M E+ + + K KI EV + + +F+ T
Sbjct: 351 YTKKLNMPSYSGRLTKLMKINQIVEEDVRERKEKAKIVEVFDLFSIVYSHPEMFEGT 407
>AF003145-9|AAT68904.1| 585|Caenorhabditis elegans Hypothetical
protein B0414.8b protein.
Length = 585
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 34 ESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVLTVLKN-NNQPIIRKRQLMRTHF 92
+SL + + I L+ L EK+ + QL ++KV+ LK+ + P + + + ++
Sbjct: 81 KSLSRSMSTISTLIGNLDGVLGEKRDDILQLGSSYKVVNSLKHIFDLPHVLRSEFDERNY 140
Query: 93 GDYRAKMASEEKKLSKMTSKIKISEVQEKPKATF 126
G+ E+ LS+ + V +K K +
Sbjct: 141 GEVLRMFKLAEESLSQYKDVPTVQLVLQKSKKIY 174
>AF003145-8|AAB57721.2| 700|Caenorhabditis elegans Hypothetical
protein B0414.8a protein.
Length = 700
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 34 ESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVLTVLKN-NNQPIIRKRQLMRTHF 92
+SL + + I L+ L EK+ + QL ++KV+ LK+ + P + + + ++
Sbjct: 81 KSLSRSMSTISTLIGNLDGVLGEKRDDILQLGSSYKVVNSLKHIFDLPHVLRSEFDERNY 140
Query: 93 GDYRAKMASEEKKLSKMTSKIKISEVQEKPKATF 126
G+ E+ LS+ + V +K K +
Sbjct: 141 GEVLRMFKLAEESLSQYKDVPTVQLVLQKSKKIY 174
>Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical
protein C03C10.4 protein.
Length = 244
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 19 PCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQLQETWKVLTVLKNNN 78
P K+ KH S+ + L+ + E+ C+QQ +K + + +E ++L NNN
Sbjct: 54 PKKLAKHISKSRQFFD-LKSRESEIRRCVQQAAAQFERQKTSVEMAREQVQILHNSLNNN 112
Query: 79 QPIIRKRQ 86
Q + ++Q
Sbjct: 113 QELDAEKQ 120
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 6 RLHNKGKST--SLQKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQ 63
RL K +S S ++P K+ + S D S RQF + +QQ + G+E +
Sbjct: 231 RLRRKSRSPRRSREEPRKMSRSRSRSADKASSSRQFDSHIPRHLQQQRSRHDSSSGSESE 290
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 6 RLHNKGKST--SLQKPCKIDKHESEGVDPEESLRQFQLELCWCIQQLERTLNEKKGNEKQ 63
RL K +S S ++P K+ + S D S RQF + +QQ + G+E +
Sbjct: 231 RLRRKSRSPRRSREEPRKMSRSRSRSADKASSSRQFDSHIPRHLQQQRSRHDSSSGSESE 290
>AL132951-5|CAC44307.1| 426|Caenorhabditis elegans Hypothetical
protein Y67H2A.6 protein.
Length = 426
Score = 27.9 bits (59), Expect = 5.9
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 99 MASEEKKL-SKMTSKIKISEVQEKPKATFFRKSVFQTTGDES----FRFNFDLTSDQIEN 153
+ EEK L SK+T+ ++ SE + AT F K T G F F D+T DQ ++
Sbjct: 109 LTPEEKPLLSKLTNAVRNSEKAGQIDATLFLKLNSITAGTTRKLPLFAFEADVT-DQEKH 167
Query: 154 GNIS--TVTEENNKIG 167
I V+EE+ ++G
Sbjct: 168 KPIEWILVSEESERVG 183
>AC024801-3|AAK68511.3| 852|Caenorhabditis elegans Hypothetical
protein Y50D7A.4 protein.
Length = 852
Score = 27.9 bits (59), Expect = 5.9
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 43 LCWCIQQLERTLNEKKGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASE 102
+CW + L + EKK +E + +K +L+ +N I+R L++ H DY ++S+
Sbjct: 88 VCWHVFGLIQK-TEKKYDEAI--KAYKRALMLEKDNLQILRDLSLLQIHIRDYDGYLSSK 144
Query: 103 EKKLS-KMTSKI 113
+ L + T ++
Sbjct: 145 YELLQLRQTQRV 156
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 27.9 bits (59), Expect = 5.9
Identities = 23/109 (21%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 47 IQQLERTLNEKKGNEKQLQETWKV-LTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKK 105
I + +R L EK + ++ + K + ++K N+ K++ + RA A++EK+
Sbjct: 704 IAKSQRELQEKTRLKSEVVDLKKAKVELIKKMNED---KKKQKTQQLANARA-FATKEKQ 759
Query: 106 LSKMTSKIKISEVQEKPKATFFRKSVFQTTGDESFRFNFDLTSDQIENG 154
+KI+ E+++K + F +K+ + + + T+ Q G
Sbjct: 760 TRLQANKIRTLEMKDKQREQFLKKTTQEVNALRKEKADAAATARQANRG 808
>Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical
protein R10E8.6 protein.
Length = 1696
Score = 27.5 bits (58), Expect = 7.8
Identities = 20/97 (20%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Query: 55 NEKKGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDY--RAKMASEEKKLSKMTSK 112
+E + KQ TW + + +N +++ + +G + K+A+E + ++ S+
Sbjct: 639 HESYESAKQCDRTW-CIAISNQDNCFLVKHKFCRPREYGTFVFSRKLAAEMEWINSSPSR 697
Query: 113 IKISEVQEKPKATFFRKSVFQTTGDESFRFNFDLTSD 149
+I K AT+ S+ T ++ R F +S+
Sbjct: 698 SQILSAFIKCLATYKNHSLEVHTAEDQVRIMFSYSSE 734
>Z78543-2|CAB01752.1| 369|Caenorhabditis elegans Hypothetical
protein F29G6.2 protein.
Length = 369
Score = 27.5 bits (58), Expect = 7.8
Identities = 25/127 (19%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Query: 48 QQLERTLNEKKGNEKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLS 107
Q LE++ NEKKG +++ + L + Q + + M+ FG R + + +K
Sbjct: 35 QDLEKSENEKKGLAARVETLERNLERSERELQLVCACQNDMKIKFGTERQDLIEDIEKYK 94
Query: 108 KMTSKIKISEVQEKPKATFFRKSVFQTTGDESFRFNFDLTSDQIENGNISTVTEENNKIG 167
+ +++ + + +K +T +F + + N + ST +E +K+
Sbjct: 95 RENQQLRTDRQELLDQKADLKKDC-KTFRQTIAQFEVEKMGGPVRN-SFSTENDEVSKLE 152
Query: 168 NTESVIA 174
E + A
Sbjct: 153 AHEKLQA 159
>Z75533-1|CAA99815.1| 423|Caenorhabditis elegans Hypothetical
protein C54G4.2 protein.
Length = 423
Score = 27.5 bits (58), Expect = 7.8
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Query: 103 EKKLSKMTSKIKISEVQEKPKATFFRKSVFQTTGDESFRFNFDLTS---DQIE----NGN 155
E K + SK K E +EK + RKS T ES DL S D E NGN
Sbjct: 37 ESKKRRPKSKTKSPEKEEKKRDQKKRKSASITPSTESTMKTSDLISSIGDHTEGEPSNGN 96
Query: 156 ISTVTEENNKIGNTE 170
V+ + K +TE
Sbjct: 97 TKFVSHLHKKQNSTE 111
>Z71261-5|CAA95800.1| 186|Caenorhabditis elegans Hypothetical
protein F21C3.6 protein.
Length = 186
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/41 (29%), Positives = 25/41 (60%)
Query: 74 LKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIK 114
L ++ I+ +Q+ ++HF ++ S E +LSK+ S++K
Sbjct: 120 LYTDSNDFIQTQQIEKSHFNAAGDRLRSSEIQLSKLESELK 160
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 61 EKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIKISE 117
E+ L+ET K + ++ + +K + MR H+ + EKKLS + K+ E
Sbjct: 516 EELLKETEKRIKESEHRRREDQKKFEAMRLHYKNKYDAAKKTEKKLSVVAKNSKVEE 572
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 61 EKQLQETWKVLTVLKNNNQPIIRKRQLMRTHFGDYRAKMASEEKKLSKMTSKIKISE 117
E+ L+ET K + ++ + +K + MR H+ + EKKLS + K+ E
Sbjct: 516 EELLKETEKRIKESEHRRREDQKKFEAMRLHYKNKYDAAKKTEKKLSVVAKNSKVEE 572
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical
protein F35G12.8 protein.
Length = 1549
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 47 IQQLERTLNEKKGNEKQLQETWKVLTVLKNNNQPIIR-KRQLMRTHFGDYRAKMASEEKK 105
+ + E+ K +K++QETW K+N +R + ++ R F D + S K
Sbjct: 470 LDEFEKRSEAPKEEQKKIQETW----AQKSNEFNKVRGEARIAREDFEDLKKLANSGTDK 525
Query: 106 LSKMTSKIKISE 117
L ++ +++ SE
Sbjct: 526 LIELKKRLESSE 537
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.310 0.126 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,199,854
Number of Sequences: 27539
Number of extensions: 217894
Number of successful extensions: 744
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 724
Number of HSP's gapped (non-prelim): 52
length of query: 216
length of database: 12,573,161
effective HSP length: 79
effective length of query: 137
effective length of database: 10,397,580
effective search space: 1424468460
effective search space used: 1424468460
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -