Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000120-TA|BGIBMGA000120-PA|IPR005377|Vacuolar protein
sorting-associated protein 26
         (431 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      28   0.15 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      28   0.15 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           25   1.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       24   2.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    24   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   5.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   5.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   9.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   9.7  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    22   9.7  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   9.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   9.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 27.9 bits (59), Expect = 0.15
 Identities = 15/49 (30%), Positives = 25/49 (51%)

Query: 361 QMEREKPEAFIDKLAGAHINENDTNDTSDEIEEPKPVEKLPVVDKPLIA 409
           +M  EKPE+  DK      ++N+  D+ +  +     +K P + KPL A
Sbjct: 437 EMRSEKPESKKDKKGSQVDHKNNLGDSKNNQDGNNGEKKKPHIKKPLNA 485


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 27.9 bits (59), Expect = 0.15
 Identities = 15/49 (30%), Positives = 25/49 (51%)

Query: 361 QMEREKPEAFIDKLAGAHINENDTNDTSDEIEEPKPVEKLPVVDKPLIA 409
           +M  EKPE+  DK      ++N+  D+ +  +     +K P + KPL A
Sbjct: 329 EMRSEKPESKKDKKGSQVDHKNNLGDSKNNQDGNNGEKKKPHIKKPLNA 377


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 303 LHPHHPQTVSYQGHQSLRKQSVSSDDNSARATPSNPDPENVMQRSVSP-SMPEKQN 357
           L P H Q+ + Q H S   +   S  ++  A+P +        RS  P S P   N
Sbjct: 81  LAPTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSN 136


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 298 KSRLPLHPHHPQTVSYQGHQSLRKQSVSSDDNSARATPSNPDPENVMQ 345
           K +  L  H  Q +S     SLR   +    +S R   SNP  E VM+
Sbjct: 256 KPKCVLSDHGTQFISNTWQNSLRAADIQPTLSSIRHPESNPS-ERVMR 302


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 1/77 (1%)

Query: 183 YHLKDVIVGKIYFLLVRIKIKHMEISIIKRETTGSGPNTFTENETVAKYEI-MDGAPVRG 241
           +HL DV    + +LL  + +  +E+ I+ +  T       +  + + K +I +D    R 
Sbjct: 279 FHLSDVRYVMVVYLLKNVVLYGLELFILAKIVTDLCQEANSTKKLIVKIKIDIDKEDERN 338

Query: 242 ESIPIRVFLAGYDLTPT 258
           E I   + L+  +L  T
Sbjct: 339 EVISSALKLSQNELEIT 355


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 2/76 (2%)

Query: 286  KQQEVILWRKSDKSRLPLHPHHPQTVSYQ--GHQSLRKQSVSSDDNSARATPSNPDPENV 343
            K++++  W KS K       H P T S+Q     S R  S ++   +   T +   P   
Sbjct: 1139 KERKICDWPKSAKCEEKKPGHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTTSTTTRPTTT 1198

Query: 344  MQRSVSPSMPEKQNGP 359
            + + +       Q  P
Sbjct: 1199 VSQLIDDKCDSGQYYP 1214



 Score = 22.2 bits (45), Expect = 7.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)

Query: 334  TPSNPDPENVMQRSVSPSMPEK 355
            T  +PD  + M  S +P +P+K
Sbjct: 2282 TECHPDASSTMAPSTTPMVPDK 2303


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 253 YDLTPTMRDINNKFSVRYYLNL 274
           Y LT  M+ IN+ FSV+  +++
Sbjct: 238 YKLTSVMQKINSAFSVQLLVSI 259


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 253 YDLTPTMRDINNKFSVRYYLNL 274
           Y LT  M+ IN+ FSV+  +++
Sbjct: 238 YKLTSVMQKINSAFSVQLLVSI 259


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 9.7
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 401 PVVDKPLIAEKPQIAEKPTLNRPEPAGSPNQ 431
           P   +PL++ K +  EK       P  SPN+
Sbjct: 108 PPNSEPLVSPKSEKEEKDMETTLTPCASPNR 138


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 9.7
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 388 SDEIEEPKPVEKLPVVDKPLIAEKPQIAE 416
           SD    P+P  ++PV  +P     P + E
Sbjct: 74  SDGTTSPEPDPEIPVAPEPAPLASPLVQE 102


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 9.7
 Identities = 9/33 (27%), Positives = 13/33 (39%)

Query: 311 VSYQGHQSLRKQSVSSDDNSARATPSNPDPENV 343
           +++ GH  +         N A A P  P P  V
Sbjct: 255 IAFYGHHFILSDPSKHGLNDATAAPGEPGPYTV 287


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 9.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query: 127 RYFLRATIVRRLTDITKEV 145
           RY+L   + RRL   TK V
Sbjct: 237 RYYLEKKVTRRLHRFTKSV 255


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 9.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query: 127 RYFLRATIVRRLTDITKEV 145
           RY+L   + RRL   TK V
Sbjct: 237 RYYLEKKVTRRLHRFTKSV 255


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.135    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,463
Number of Sequences: 317
Number of extensions: 5201
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 14
length of query: 431
length of database: 114,650
effective HSP length: 59
effective length of query: 372
effective length of database: 95,947
effective search space: 35692284
effective search space used: 35692284
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)