GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000119-TA|BGIBMGA000119-PA|IPR000860|Porphobilinogen
deaminase
         (407 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       25   4.9  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 24.6 bits (51), Expect = 4.9
 Identities = 12/48 (25%), Positives = 23/48 (47%)

Query: 49  DRVLDQPLPKIGEKSLFTKDLEDALMSKNVDFVVHSLKDLPTTLPDGL 96
           +R++  P  ++ E  +   D+E+ LM ++     H L    T   DG+
Sbjct: 347 NRMMPGPAIEVCENDIIVVDVENHLMGESTTIHWHGLHQRRTPYMDGV 394


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.134    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 397,468
Number of Sequences: 2123
Number of extensions: 16393
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 1
length of query: 407
length of database: 516,269
effective HSP length: 66
effective length of query: 341
effective length of database: 376,151
effective search space: 128267491
effective search space used: 128267491
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 49 (23.8 bits)