Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000115-TA|BGIBMGA000115-PA|undefined
(641 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31870.1 68414.m03917 expressed protein 120 2e-27
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 53 5e-07
At5g41020.1 68418.m04986 myb family transcription factor contain... 47 3e-05
At3g28770.1 68416.m03591 expressed protein 45 1e-04
At3g29075.1 68416.m03637 glycine-rich protein 45 2e-04
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa... 42 0.001
At5g64200.2 68418.m08063 arginine/serine-rich splicing factor SC... 42 0.001
At5g64200.1 68418.m08062 arginine/serine-rich splicing factor SC... 42 0.001
At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein ... 40 0.004
At4g26630.1 68417.m03837 expressed protein 39 0.012
At1g56660.1 68414.m06516 expressed protein 39 0.012
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 38 0.015
At4g31880.1 68417.m04531 expressed protein 38 0.027
At5g61150.2 68418.m07672 leo1-like family protein weak similarit... 37 0.036
At2g22795.1 68415.m02704 expressed protein 37 0.047
At2g14140.1 68415.m01575 hypothetical protein similar to At2g049... 37 0.047
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 36 0.062
At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing ... 36 0.083
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 36 0.083
At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profi... 36 0.083
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 36 0.11
At5g42540.1 68418.m05178 5'-3' exoribonuclease (XRN2) identical ... 35 0.14
At2g35670.1 68415.m04375 transcription factor, putative / fertil... 35 0.14
At5g61150.1 68418.m07671 leo1-like family protein weak similarit... 35 0.19
At5g60030.1 68418.m07527 expressed protein 35 0.19
At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein... 35 0.19
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 34 0.25
At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing ... 34 0.25
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 34 0.25
At5g63550.1 68418.m07976 expressed protein 34 0.33
At5g53440.1 68418.m06641 expressed protein 34 0.33
At5g25060.1 68418.m02970 RNA recognition motif (RRM)-containing ... 34 0.33
At5g53800.1 68418.m06685 expressed protein 33 0.44
At4g31490.1 68417.m04473 coatomer beta subunit, putative / beta-... 33 0.58
At4g31480.1 68417.m04472 coatomer beta subunit, putative / beta-... 33 0.58
At3g09710.1 68416.m01150 calmodulin-binding family protein low s... 33 0.58
At2g44200.1 68415.m05500 expressed protein 33 0.58
At2g21380.1 68415.m02544 kinesin motor protein-related 33 0.58
At1g70100.3 68414.m08067 expressed protein 33 0.58
At1g70100.2 68414.m08066 expressed protein 33 0.58
At1g70100.1 68414.m08065 expressed protein 33 0.58
At1g32120.1 68414.m03952 expressed protein contains Pfam profile... 33 0.58
At1g19990.1 68414.m02504 expressed protein ; expression supporte... 33 0.58
At1g03910.1 68414.m00376 expressed protein low similarity to cac... 33 0.58
At5g27120.1 68418.m03237 SAR DNA-binding protein, putative stron... 33 0.77
At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp... 33 0.77
At4g34400.1 68417.m04886 transcriptional factor B3 family protei... 33 0.77
At3g53500.2 68416.m05907 zinc knuckle (CCHC-type) family protein... 33 0.77
At3g53500.1 68416.m05906 zinc knuckle (CCHC-type) family protein... 33 0.77
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 33 0.77
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 33 0.77
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 33 0.77
At1g75150.1 68414.m08729 expressed protein ; expression supporte... 33 0.77
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 33 0.77
At3g20550.1 68416.m02601 forkhead-associated domain-containing p... 32 1.0
At3g06480.1 68416.m00750 DEAD box RNA helicase, putative similar... 32 1.0
At1g77840.1 68414.m09070 eukaryotic translation initiation facto... 32 1.0
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 32 1.0
At1g29170.1 68414.m03569 expressed protein ; expression supporte... 32 1.0
At1g14770.2 68414.m01766 expressed protein 32 1.0
At1g14770.1 68414.m01765 expressed protein 32 1.0
At5g47430.1 68418.m05844 expressed protein 32 1.3
At4g19190.1 68417.m02832 zinc knuckle (CCHC-type) family protein... 32 1.3
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 32 1.3
At3g56660.1 68416.m06301 bZIP transcription factor family protei... 32 1.3
At2g01100.3 68415.m00018 expressed protein 32 1.3
At2g01100.2 68415.m00017 expressed protein 32 1.3
At2g01100.1 68415.m00016 expressed protein 32 1.3
At5g55670.1 68418.m06941 RNA recognition motif (RRM)-containing ... 31 1.8
At5g13340.1 68418.m01535 expressed protein 31 1.8
At4g28990.1 68417.m04143 RNA-binding protein-related contains we... 31 1.8
At4g07520.1 68417.m01174 hypothetical protein contains Pfam prof... 31 1.8
At3g25590.1 68416.m03186 expressed protein 31 1.8
At3g17010.1 68416.m02172 transcriptional factor B3 family protei... 31 1.8
At2g21560.1 68415.m02566 expressed protein contains weak similar... 31 1.8
At1g18950.1 68414.m02358 aminoacyl-tRNA synthetase family contai... 31 1.8
At5g55820.1 68418.m06956 expressed protein 31 2.3
At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein... 31 2.3
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 31 2.3
At3g05380.1 68416.m00588 myb family transcription factor contain... 31 2.3
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 31 2.3
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 31 2.3
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 31 2.3
At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contai... 31 3.1
At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin... 31 3.1
At5g61330.1 68418.m07696 rRNA processing protein-related contain... 31 3.1
At4g39050.1 68417.m05531 kinesin-related protein (MKRP2) kinesin... 31 3.1
At3g09670.1 68416.m01146 PWWP domain-containing protein 31 3.1
At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar ... 31 3.1
At2g31270.1 68415.m03818 hydroxyproline-rich glycoprotein family... 31 3.1
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 31 3.1
At1g75310.1 68414.m08748 DNAJ heat shock N-terminal domain-conta... 31 3.1
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 31 3.1
At5g03740.1 68418.m00335 zinc finger (C2H2 type) family protein ... 30 4.1
At3g12860.1 68416.m01603 nucleolar protein Nop56, putative simil... 30 4.1
At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4) cont... 30 4.1
At2g17580.1 68415.m02034 polynucleotide adenylyltransferase fami... 30 4.1
At1g61170.1 68414.m06893 expressed protein 30 4.1
At1g60590.1 68414.m06820 polygalacturonase, putative / pectinase... 30 4.1
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 30 4.1
At1g02840.3 68414.m00246 pre-mRNA splicing factor SF2 (SF2) / SR... 30 4.1
At1g02840.1 68414.m00245 pre-mRNA splicing factor SF2 (SF2) / SR... 30 4.1
At5g57320.1 68418.m07160 villin, putative similar to villin 2 (V... 30 5.4
At5g37380.2 68418.m04492 DNAJ heat shock N-terminal domain-conta... 30 5.4
At5g37380.1 68418.m04491 DNAJ heat shock N-terminal domain-conta... 30 5.4
At3g32900.1 68416.m04166 Ulp1 protease family protein similar to... 30 5.4
At2g27170.1 68415.m06029 structural maintenance of chromosomes (... 30 5.4
At2g15370.1 68415.m01758 xyloglucan fucosyltransferase, putative... 30 5.4
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 30 5.4
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ... 30 5.4
At5g35604.1 68418.m04242 hypothetical protein 29 7.2
At5g18810.1 68418.m02235 SC35-like splicing factor, 28 kD (SCL28... 29 7.2
At5g15430.1 68418.m01806 calmodulin-binding protein-related has ... 29 7.2
At4g02720.1 68417.m00368 expressed protein temporary automated f... 29 7.2
At3g62900.1 68416.m07066 expressed protein ; expression supporte... 29 7.2
At3g49430.1 68416.m05403 pre-mRNA splicing factor, putative stro... 29 7.2
At3g29210.1 68416.m03664 hypothetical protein similar to At1g328... 29 7.2
At2g42150.1 68415.m05217 DNA-binding bromodomain-containing prot... 29 7.2
At2g26570.1 68415.m03187 expressed protein contains Pfam profile... 29 7.2
At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing ... 29 7.2
At1g32840.1 68414.m04047 Ulp1 protease family protein similar to... 29 7.2
At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /... 29 7.2
At1g09050.1 68414.m01009 expressed protein 29 7.2
At5g52040.2 68418.m06459 arginine/serine-rich splicing factor RS... 29 9.5
At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR... 29 9.5
At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family p... 29 9.5
At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family p... 29 9.5
At4g00520.1 68417.m00071 acyl-CoA thioesterase family protein co... 29 9.5
At3g59800.1 68416.m06673 expressed protein 29 9.5
At3g01710.1 68416.m00105 expressed protein 29 9.5
At1g78120.1 68414.m09104 tetratricopeptide repeat (TPR)-containi... 29 9.5
At1g76360.1 68414.m08872 protein kinase, putative similar to pro... 29 9.5
At1g58050.1 68414.m06579 helicase domain-containing protein cont... 29 9.5
At1g32810.1 68414.m04044 expressed protein 29 9.5
>At1g31870.1 68414.m03917 expressed protein
Length = 561
Score = 120 bits (290), Expect = 2e-27
Identities = 106/350 (30%), Positives = 153/350 (43%), Gaps = 51/350 (14%)
Query: 321 PPRKSKRQISESPCRNVPLRKKTNDSDSDLSPPRKNIRYAENKSYRNVSKKPHRRNDTK- 379
PPR+ KR + SP +V +KK+ND LSPPR+ + Y + S +P RR+
Sbjct: 234 PPRR-KRDLHGSPVSDV--KKKSND----LSPPRR-------RRYHSPSPEPARRSSKSF 279
Query: 380 DSGSDLSPPRKLKNIDNYR------RHYSEXXXXXXXXXXXXXXXXLSPPRKDRSNKNDS 433
S +DLSPP + N+ + + + + SPPR+ R DS
Sbjct: 280 GSNADLSPPGRNINMKDSQDSDLSPQRKAADLRRSSENVSRSSNFDSSPPRRPR---RDS 336
Query: 434 PPPTHKKMEKTLEGKKAGLQDARQLRQENXXXXXXXXXXXXXXXXXVSGRNAQVVSR-KV 492
PP K E +K GL + + E ++G+NA+ V R K+
Sbjct: 337 SPPQISK-----EQRKTGLISGKDIGSEYRKKKEDEKLRFKNMDSELTGQNAEAVFRDKI 391
Query: 493 KRDDSXXXXXXXXXXXXXXXMDEKYK-RWSKGLKQLEAQEERLQDFMHEASKPLARHRDD 551
++ K W KGL Q E RLQ+ E KP AR RDD
Sbjct: 392 TGKRISKEEYLKSKQKKVIEKPKEIKLEWGKGLAQKREAEARLQELELEKDKPFARTRDD 451
Query: 552 ADSENRLKQIERAGDPMLRYIQDRKREE-----GN----------LPPERPKY-----KG 591
+ + +K+ R GDPM ++ RK E G+ +P PK+ +
Sbjct: 452 PELDQMMKERVRFGDPMAHLVKKRKYETTLVDLGDDEEMKKSGFIIPQSVPKHSWLTRRL 511
Query: 592 NFPPNRFNLRPGYRWDGVDRSNGYEKKFFEQQSKRKAQEEEAYKWSTEDL 641
NR+ ++PG WDGVDRSNG EK ++ ++RKA E EAY WS D+
Sbjct: 512 EAASNRYGIKPGRHWDGVDRSNGTEKDLIKKTNERKATEIEAYLWSVADM 561
Score = 53.6 bits (123), Expect = 4e-07
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 141 SPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEY-DSDLSPPRK---HEGQRAEK 196
SP K K + DSD SPPR+ + SP+ +Y DLSPPR+ H R
Sbjct: 160 SPEPNRKHTKPVSLDSDMSPPRKRKARNDSPSPEPEAKYLSEDLSPPRRRHVHSPSRESS 219
Query: 197 LKKPSRWDNEQDKSPKSLRANNHR------RSKSSDLSPPRKTQTNKISSGQEMKIQKRY 250
K+ + + D SP + + H + KS+DLSPPR+ + + S + K +
Sbjct: 220 RKRSDSVELDDDLSPPRRKRDLHGSPVSDVKKKSNDLSPPRRRRYHSPSPEPARRSSKSF 279
Score = 47.2 bits (107), Expect = 3e-05
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 141 SPSGRAKSKKKHNS---DSDFSPPRRGNPVKRNNSPKRTTEYDS-DLSPPRK--HEGQRA 194
SPS R S+K+ +S D D SPPRR + + SP + S DLSPPR+ +
Sbjct: 213 SPS-RESSRKRSDSVELDDDLSPPRRKRDL--HGSPVSDVKKKSNDLSPPRRRRYHSPSP 269
Query: 195 EKLKKPSR-WDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMKIQKRYDVT 253
E ++ S+ + + D SP R N + S+ SDLSP RK + SS + + +D +
Sbjct: 270 EPARRSSKSFGSNADLSPPG-RNINMKDSQDSDLSPQRKAADLRRSS-ENVSRSSNFDSS 327
Query: 254 SP 255
P
Sbjct: 328 PP 329
Score = 46.4 bits (105), Expect = 6e-05
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 13/134 (9%)
Query: 129 DSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGN--PVKRNNSPKRT--TEYDSDLS 184
DS+ P +A + + D SPPRR + R +S KR+ E D DLS
Sbjct: 174 DSDMSPPRKRKARNDSPSPEPEAKYLSEDLSPPRRRHVHSPSRESSRKRSDSVELDDDLS 233
Query: 185 PPRKHE---GQRAEKLKK------PSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQT 235
PPR+ G +KK P R SP+ R ++ ++DLSPP +
Sbjct: 234 PPRRKRDLHGSPVSDVKKKSNDLSPPRRRRYHSPSPEPARRSSKSFGSNADLSPPGRNIN 293
Query: 236 NKISSGQEMKIQKR 249
K S ++ Q++
Sbjct: 294 MKDSQDSDLSPQRK 307
Score = 45.2 bits (102), Expect = 1e-04
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 23/134 (17%)
Query: 141 SPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPK--------RTTEYDSDLSPPRKHEGQ 192
SP + D+D SPPRR KR+NSP + DSD+SPPRK + +
Sbjct: 130 SPEPGPRRSVADRVDTDMSPPRRR---KRHNSPSPEPNRKHTKPVSLDSDMSPPRKRKAR 186
Query: 193 RAEKLKKPSRWDNEQDKSP-------KSLRANNHRRSKS----SDLSPPRKTQTNKISSG 241
+P +D SP R ++ +RS S DLSPPR+ + S
Sbjct: 187 NDSPSPEPEAKYLSEDLSPPRRRHVHSPSRESSRKRSDSVELDDDLSPPRRKRDLHGSPV 246
Query: 242 QEMKIQKRYDVTSP 255
++K +K D++ P
Sbjct: 247 SDVK-KKSNDLSPP 259
Score = 40.7 bits (91), Expect = 0.003
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Query: 321 PPRKSK-RQISESPCRNVPLRKKTNDSDSDLSPPRKNIRYAENKSYRNVSKKPHRRNDTK 379
PPR+ + R S SP P R + D+D+SPPR+ K + + S +P+R++
Sbjct: 118 PPRRQRTRNDSPSP-EPGPRRSVADRVDTDMSPPRR------RKRHNSPSPEPNRKHTKP 170
Query: 380 DS-GSDLSPPRKLKNIDNYRRHYSEXXXXXXXXXXXXXXXXLSPPRKDRSNKNDS 433
S SD+SPPRK K ++ E SP R+ ++DS
Sbjct: 171 VSLDSDMSPPRKRKARNDSPSPEPEAKYLSEDLSPPRRRHVHSPSRESSRKRSDS 225
Score = 39.5 bits (88), Expect = 0.007
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 323 RKSKRQISESPCRNVPLRKKTNDSDSDLSPPRKNIRYAENKSYRNVSKKPHRRNDTKDS- 381
R++ I+E V L D+ S++SPPR+ + N S S +P R D
Sbjct: 89 RRAHNAIAEDGSGWVTLPLNREDTQSNISPPRR--QRTRNDS---PSPEPGPRRSVADRV 143
Query: 382 GSDLSPPRKLKNIDNYRRHYSEXXXXXXXXXXXXXXXXLSPPRKDRSNKNDSPPP 436
+D+SPPR+ K R + +SPPRK R +NDSP P
Sbjct: 144 DTDMSPPRRRK-----RHNSPSPEPNRKHTKPVSLDSDMSPPRK-RKARNDSPSP 192
Score = 35.9 bits (79), Expect = 0.083
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 11/74 (14%)
Query: 321 PPRKSKRQISESPCRNVPLRKKTNDSDSDLSPPRKNIRYAENKSYRNVSKKPHRRNDTKD 380
PPRK K + ++SP P K ++ DLSPPR+ R+ + S R S+K R+D+ +
Sbjct: 179 PPRKRKAR-NDSPSPE-PEAKYLSE---DLSPPRR--RHVHSPS-RESSRK---RSDSVE 227
Query: 381 SGSDLSPPRKLKNI 394
DLSPPR+ +++
Sbjct: 228 LDDDLSPPRRKRDL 241
Score = 33.9 bits (74), Expect = 0.33
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 138 SEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNN-SPKRTTEYDSDLSPPRK 188
++ SP GR K + DSD SP R+ ++R++ + R++ +DS SPPR+
Sbjct: 283 ADLSPPGR-NINMKDSQDSDLSPQRKAADLRRSSENVSRSSNFDS--SPPRR 331
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 53.2 bits (122), Expect = 5e-07
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 6/163 (3%)
Query: 79 KKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVS 138
KK E+ T ++K + + DD + + E ++ +E E+E E + SED+ P +S
Sbjct: 509 KKTEEATRTNKKSVAHSDDESEEEKEDDEEEEKEQEVEEEEEENENGIPDKSEDEAPQLS 568
Query: 139 EASPSGRAKSKKKHNSDSDFSPPRRGNPVKRN--NSPKRTTEYDSDLSPPRKHEGQRAEK 196
E+ + ++ + + + R + K + S + T + SPP+K +R+
Sbjct: 569 ESEENVESEEESEEETKKKKRGSRTSSDKKESAGKSRSKKTAVPTKSSPPKKATQKRSAG 628
Query: 197 LKKPSRWDNEQDKSPK--SLRANNHRRSKSSDLSPPRKTQTNK 237
+K S D++ D SPK S R + +K +P + K
Sbjct: 629 KRKKS--DDDSDTSPKASSKRKKTEKPAKEQAAAPLKSVSKEK 669
Score = 33.9 bits (74), Expect = 0.33
Identities = 33/162 (20%), Positives = 66/162 (40%), Gaps = 12/162 (7%)
Query: 56 DVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVK-- 113
D D+ D+A +V + ++ E K++ ++ + N+ + + +++ D K
Sbjct: 172 DKGDDVDEAEKVENVDEDDKEEALKEKNEAELAEEEETNKGEEVKEANKEDDVEADTKVA 231
Query: 114 ETEKENELVFGK-MYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNS 172
E E E++ K D E++K + E S + K++ N D N K +
Sbjct: 232 EPEVEDKKTESKDENEDKEEEKEDEKEESMDDKEDEKEESNDDDKEDEKEESNDDKEDKK 291
Query: 173 PKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNE-QDKSPKS 213
D+ K + EK + ++ D E +D PK+
Sbjct: 292 --------EDIKKSNKRGKGKTEKTRGKTKSDEEKKDIEPKT 325
>At5g41020.1 68418.m04986 myb family transcription factor contains
Pfam profile: PF00249 Myb DNA binding domain
Length = 588
Score = 47.2 bits (107), Expect = 3e-05
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 15/211 (7%)
Query: 52 GDELDVYDEGDDAPQVAGIIDERPEHIKKQ-EQFTTSSKWKIVNQDDGFNSKLQIQEIKK 110
GDE+ + + + + I E + +KK+ ++ + +K +DDG K + E K
Sbjct: 66 GDEVFIVKKKKKSKKPIRIDSEAVDAVKKKSKKRSKETKADSEAEDDGVEKKSK--EKSK 123
Query: 111 DVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKK---HNSDSDFSPPRR-GNP 166
+ K + ++ V K ++ +V E + S + KKK D+D
Sbjct: 124 ETKVDSEAHDGVKRKKKKSKKESGGDVIENTESSKVSDKKKGKRKRDDTDLGAEENIDKE 183
Query: 167 VKR-NNSPKRTTEYD-SDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKS 224
VKR NN K + + D D++ ++G++ K KK S ++ S + RR K
Sbjct: 184 VKRKNNKKKPSVDSDVEDINLDSTNDGKKKRKKKKQSEDSETEENGLNSTKDAKKRRKKK 243
Query: 225 SDLSPPRKTQTNKISSGQEMKIQKRYDVTSP 255
+K + +++S +E + D+T+P
Sbjct: 244 ------KKKKQSEVSEAEEKSDKSDEDLTTP 268
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 45.2 bits (102), Expect = 1e-04
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 14/171 (8%)
Query: 79 KKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVS 138
KK+E ++ K K ++ + N++L+ QE K KET K K+ +++D+K
Sbjct: 947 KKKESKNSNMKKKEEDKKEYVNNELKKQEDNK--KETTKSEN---SKLKEENKDNKEK-K 1000
Query: 139 EASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLK 198
E+ S +KK + K+ + K+ E DS+ RK + ++ E
Sbjct: 1001 ESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSE---ERKSKKEKEESRD 1057
Query: 199 KPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMKIQKR 249
++ E+ K K + NH+ K D ++ + NK +E K +K+
Sbjct: 1058 LKAKKKEEETKEKK--ESENHKSKKKED---KKEHEDNKSMKKEEDKKEKK 1103
Score = 37.9 bits (84), Expect = 0.020
Identities = 40/187 (21%), Positives = 76/187 (40%), Gaps = 11/187 (5%)
Query: 73 ERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIK-KDVKETEKENELVFGKMYSDSE 131
++ E KK+ + +SK K N+D+ + + K ++ KE E++ + + +
Sbjct: 972 KKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKK 1031
Query: 132 DDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKR------NNSPKRTTEYDSDLSP 185
+ E S KSKK+ D ++ K + S K+ + + + +
Sbjct: 1032 KSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHEDNK 1091
Query: 186 PRKHEGQRAEKLK---KPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQ 242
K E + EK K SR E K + L N + K D + +K+Q K+ +
Sbjct: 1092 SMKKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKE-DKNEKKKSQHVKLVKKE 1150
Query: 243 EMKIQKR 249
K +K+
Sbjct: 1151 SDKKEKK 1157
Score = 35.5 bits (78), Expect = 0.11
Identities = 34/177 (19%), Positives = 76/177 (42%), Gaps = 13/177 (7%)
Query: 72 DERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSE 131
+ER +K+E +K K + S+ + K+D KE E + E
Sbjct: 1044 EERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHEDNKSM-------KKE 1096
Query: 132 DDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEG 191
+DK + S +++ K++ D + + N K + + K+ +++ + K E
Sbjct: 1097 EDKKEKKKHEES-KSRKKEEDKKDMEKLEDQNSNKKKEDKNEKKKSQHVKLV----KKES 1151
Query: 192 QRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMKIQK 248
+ EK + + + ++ +S KS + ++ K S +K + ++ +E K++K
Sbjct: 1152 DKKEKKENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKE-KEMKESEEKKLKK 1207
Score = 35.1 bits (77), Expect = 0.14
Identities = 38/173 (21%), Positives = 68/173 (39%), Gaps = 7/173 (4%)
Query: 74 RPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQ---EIKKDVKETEKENELVFGKMYSDS 130
+ E KK+++ SK + +D KL+ Q + K+D E +K + K SD
Sbjct: 1094 KKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDK 1153
Query: 131 EDDKPNVSEASPSGRAKSKKKHNS-DSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKH 189
++ K N ++ SK + N D + K+ K + E + +
Sbjct: 1154 KEKKENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEEDRK 1213
Query: 190 EGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRS--KSSDLSPPRKTQTNKISS 240
+ E+ KK E++K PK + N ++S K + K N+ S
Sbjct: 1214 KQTSVEENKKQKETKKEKNK-PKDDKKNTTKQSGGKKESMESESKEAENQQKS 1265
Score = 34.7 bits (76), Expect = 0.19
Identities = 33/152 (21%), Positives = 74/152 (48%), Gaps = 17/152 (11%)
Query: 73 ERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSED 132
E E + +E ++ S+ V++ + +SK Q ++ +K++KE+E++ K+ + ED
Sbjct: 1158 ENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEK------KLKKNEED 1211
Query: 133 DKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQ 192
K S + ++KK+ N D + N K++ K + E +S E +
Sbjct: 1212 RKKQTSVEENKKQKETKKEKNKPKD----DKKNTTKQSGGKKESMESES-------KEAE 1260
Query: 193 RAEKLKKPSRWDNEQDKSPKSLRANNHRRSKS 224
+K + ++ D+++ K+ ++A++ S S
Sbjct: 1261 NQQKSQATTQADSDESKNEILMQADSQADSHS 1292
Score = 32.3 bits (70), Expect = 1.0
Identities = 75/466 (16%), Positives = 160/466 (34%), Gaps = 32/466 (6%)
Query: 93 VNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKH 152
V ++DG + K + E K++ K++ ++ +L + +DS+DDK +V + + +
Sbjct: 685 VKKNDGSSEKGE--EGKENNKDSMEDKKLENKESQTDSKDDK-SVDDKQEEAQIYGGE-- 739
Query: 153 NSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPK 212
S D S +G + + K T + + +G + E +K + + ++ K K
Sbjct: 740 -SKDDKSVEAKGKKKESKENKKTKTNENRVRNKEENVQGNKKES-EKVEKGEKKESKDAK 797
Query: 213 SLRANNHRRSKSSDLSPPRKTQTNKISSGQEMKIQKRYDVTSPXXXXXXXXXXNRLNXXX 272
S+ ++++ S++ K ++ + + ++ + K Y +
Sbjct: 798 SVETKDNKKLSSTENRDEAKERSGE-DNKEDKEESKDYQSVEAKEKNENGGVDTNVGNKE 856
Query: 273 XXXXXXXXXXXXFGHDNKQSQLKKYNDTDYGXXXXXXXXXXXXXXXXXPPRKSKRQISES 332
+ ++S KK + K R + +
Sbjct: 857 DSKDLKDDRSVEVKANKEESMKKKREEVQRNDKSST---------------KEVRDFANN 901
Query: 333 PCRNVPLRKKTNDSDSDLSPPRKNIRYAENKSYRNVSKKPHRRNDTKDSGSDLSPPRKLK 392
++ ++K + +S +K ENK N S K ++ K + K K
Sbjct: 902 --MDIDVQKGSGESVKYKKDEKKEGNKEENKDTINTSSKQKGKDKKKKKKESKNSNMKKK 959
Query: 393 NID--NYRRHYSEXXXXXXXXXXXXXXXXLSPPRKDRSNKNDSPPPTHKKME-KTLEGKK 449
D Y + + L KD K +S K E K E KK
Sbjct: 960 EEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKK 1019
Query: 450 AGLQDARQLRQENXXXXXXXXXXXXXXXXXVSGRNAQVVSRKVKRDDSXXXXXXXXXXXX 509
+ ++ + ++ ++ + K K+++
Sbjct: 1020 SKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAK-KKEEETKEKKESENHKS 1078
Query: 510 XXXMDEKYKRWSKGLKQLEAQEERLQDFMHEASKPLARHRDDADSE 555
D+K +K +K+ E ++E+ + HE SK + D D E
Sbjct: 1079 KKKEDKKEHEDNKSMKKEEDKKEKKK---HEESKSRKKEEDKKDME 1121
Score = 30.3 bits (65), Expect = 4.1
Identities = 39/199 (19%), Positives = 80/199 (40%), Gaps = 11/199 (5%)
Query: 52 GDELDVYDEGDD-APQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKK 110
G++ D D DD + +V +E + +++ Q S K V +D N + +Q+
Sbjct: 853 GNKEDSKDLKDDRSVEVKANKEESMKKKREEVQRNDKSSTKEV-RDFANNMDIDVQKGSG 911
Query: 111 DVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRN 170
+ + +K+ + K + D N S K KKK + +S+ N
Sbjct: 912 ESVKYKKDEKKEGNK---EENKDTINTSSKQKGKDKKKKKKESKNSNMKKKEEDKKEYVN 968
Query: 171 NSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPP 230
N K+ + + + K E KLK+ ++ + E+ +S S N ++ S
Sbjct: 969 NELKKQEDNKKETT---KSEN---SKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKT 1022
Query: 231 RKTQTNKISSGQEMKIQKR 249
++ + Q+ K +++
Sbjct: 1023 KEEAKKEKKKSQDKKREEK 1041
Score = 30.3 bits (65), Expect = 4.1
Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 3/154 (1%)
Query: 95 QDDGFNSKLQIQEIKKD---VKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKK 151
+D N K + + KK VK +KE++ K + + K S S K+K
Sbjct: 1124 EDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEK 1183
Query: 152 HNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSP 211
+S + K+ E + +++ Q+ K +K D++++ +
Sbjct: 1184 KSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKEKNKPKDDKKNTTK 1243
Query: 212 KSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMK 245
+S S+S + +K+Q + E K
Sbjct: 1244 QSGGKKESMESESKEAENQQKSQATTQADSDESK 1277
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 44.8 bits (101), Expect = 2e-04
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 6/150 (4%)
Query: 59 DEGDDAPQVAG--IIDERPEHIKKQEQFTTSSKWKIVN--QDDGFNSKLQIQEIKKDVKE 114
D+GDD + D+ E KK+E+ K K N +DD F K + ++ K+ +
Sbjct: 140 DDGDDGHKKHSGKDYDDGDEKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYKEHHDD 199
Query: 115 TEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPK 174
+ + + K Y+D +D+K + K KKKHN + D ++ + K
Sbjct: 200 DDYDEKKKKKKDYND-DDEKKKKKHYNDDDDEK-KKKHNYNDDDDEKKKKKEYHDDEDKK 257
Query: 175 RTTEYDSDLSPPRKHEGQRAEKLKKPSRWD 204
+ YD+D +K + R + +K + D
Sbjct: 258 KKKHYDNDDDEKKKKKDHRDDDDEKKKKKD 287
>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase family
protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 3
WD-40 repeats (PF00400);similar to Type II
inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
(5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
Length = 1305
Score = 42.3 bits (95), Expect = 0.001
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 139 EASPSG-RAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKL 197
+++PS +++S KK+ DS+ ++ + + S K++ + DS+ +K +G K
Sbjct: 1102 DSNPSNSKSQSLKKNEGDSNSKSSKKSDGDSNSKSSKKS-DGDSNSKSSKKSDGDSNSKS 1160
Query: 198 KKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQE-MKIQKRYD 251
K S D+ S KS +N + SK SD ++++K S G K QK+ D
Sbjct: 1161 SKKSDGDSNSKSSKKSDGDSNSKSSKKSD--GDSNSKSSKKSDGDSCSKSQKKSD 1213
Score = 37.5 bits (83), Expect = 0.027
Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 4/156 (2%)
Query: 94 NQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHN 153
N + + L+ E + K ++K + K S+ D + S G + SK
Sbjct: 1104 NPSNSKSQSLKKNEGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKK 1163
Query: 154 SDSDF-SPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWD---NEQDK 209
SD D S + + N+ + ++ DS+ +K +G K +K S D Q K
Sbjct: 1164 SDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSCSKSQKKSDGDTNSKSQKK 1223
Query: 210 SPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMK 245
+ +H+++ S K SS K
Sbjct: 1224 GDGDSSSKSHKKNDGDSSSKSHKKNDGDSSSKSHKK 1259
>At5g64200.2 68418.m08063 arginine/serine-rich splicing factor SC35
contains similarity to splicing factor; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 303
Score = 41.9 bits (94), Expect = 0.001
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 160 PPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWD-NEQD--KSPKSLRA 216
PP + R+ SP+R+ SPPR+ +R+ ++ SR D E+D K +S
Sbjct: 109 PPPKSRR-SRSRSPRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSY 167
Query: 217 NNHRRSKSSDLSPPRKTQTNKISSGQEMKIQKRYD 251
+ R + D R+T++ S ++ +++ RYD
Sbjct: 168 DRRERHEEKDRDHRRRTRSRSASPDEKRRVRGRYD 202
Score = 33.1 bits (72), Expect = 0.58
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 8/116 (6%)
Query: 141 SPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSD-LSPPRKHEGQRAEKLKK 199
SP +++ D R+ + + + +R E D D R EK +
Sbjct: 138 SPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRERHEEKDRDHRRRTRSRSASPDEKRRV 197
Query: 200 PSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMKIQKRYDVTSP 255
R+DNE +SL A+ RRS PR + K S +E+ KR + SP
Sbjct: 198 RGRYDNESRSHSRSLSASPARRS-------PRSSSPQKTSPAREVSPDKRSNERSP 246
Score = 32.3 bits (70), Expect = 1.0
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 118 ENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTT 177
E V G+ ++S ++S ASP+ R+ + +S SP R +P KR+N +R+
Sbjct: 193 EKRRVRGRYDNESRSHSRSLS-ASPARRSP---RSSSPQKTSPAREVSPDKRSN--ERSP 246
Query: 178 EYDSDLSPPRKHEGQRAEKLKK--PSRWDNEQDKSPKS 213
LS PR Q+A K+ P R NE+ SP S
Sbjct: 247 SPRRSLS-PRSPALQKASPSKEMSPERRSNERSPSPGS 283
Score = 31.1 bits (67), Expect = 2.3
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Query: 135 PNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRA 194
PN + S + K SP R +P + + P+R + S R + R
Sbjct: 96 PNAEKISKGRVVEPPPKSRRSRSRSPRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYRE 155
Query: 195 EKLKKPSRWDNEQDKSPKSLRANNH-RRSKSSDLSPPRK 232
+ +K SR + + + +H RR++S SP K
Sbjct: 156 KDYRKRSRSRSYDRRERHEEKDRDHRRRTRSRSASPDEK 194
>At5g64200.1 68418.m08062 arginine/serine-rich splicing factor SC35
contains similarity to splicing factor; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 303
Score = 41.9 bits (94), Expect = 0.001
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 160 PPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWD-NEQD--KSPKSLRA 216
PP + R+ SP+R+ SPPR+ +R+ ++ SR D E+D K +S
Sbjct: 109 PPPKSRR-SRSRSPRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSY 167
Query: 217 NNHRRSKSSDLSPPRKTQTNKISSGQEMKIQKRYD 251
+ R + D R+T++ S ++ +++ RYD
Sbjct: 168 DRRERHEEKDRDHRRRTRSRSASPDEKRRVRGRYD 202
Score = 33.1 bits (72), Expect = 0.58
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 8/116 (6%)
Query: 141 SPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSD-LSPPRKHEGQRAEKLKK 199
SP +++ D R+ + + + +R E D D R EK +
Sbjct: 138 SPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRERHEEKDRDHRRRTRSRSASPDEKRRV 197
Query: 200 PSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMKIQKRYDVTSP 255
R+DNE +SL A+ RRS PR + K S +E+ KR + SP
Sbjct: 198 RGRYDNESRSHSRSLSASPARRS-------PRSSSPQKTSPAREVSPDKRSNERSP 246
Score = 32.3 bits (70), Expect = 1.0
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 118 ENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTT 177
E V G+ ++S ++S ASP+ R+ + +S SP R +P KR+N +R+
Sbjct: 193 EKRRVRGRYDNESRSHSRSLS-ASPARRSP---RSSSPQKTSPAREVSPDKRSN--ERSP 246
Query: 178 EYDSDLSPPRKHEGQRAEKLKK--PSRWDNEQDKSPKS 213
LS PR Q+A K+ P R NE+ SP S
Sbjct: 247 SPRRSLS-PRSPALQKASPSKEMSPERRSNERSPSPGS 283
Score = 31.1 bits (67), Expect = 2.3
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Query: 135 PNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRA 194
PN + S + K SP R +P + + P+R + S R + R
Sbjct: 96 PNAEKISKGRVVEPPPKSRRSRSRSPRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYRE 155
Query: 195 EKLKKPSRWDNEQDKSPKSLRANNH-RRSKSSDLSPPRK 232
+ +K SR + + + +H RR++S SP K
Sbjct: 156 KDYRKRSRSRSYDRRERHEEKDRDHRRRTRSRSASPDEK 194
>At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein
NAP57, putative similar to SP|P40615 Dyskerin (Nucleolar
protein NAP57) {Rattus norvegicus}; contains Pfam
profiles PF01509: TruB family pseudouridylate synthase
(N terminal domain), PF01472: PUA domain; supporting
cDNA gi|8901185|gb|AF234984.2|AF234984
Length = 565
Score = 40.3 bits (90), Expect = 0.004
Identities = 39/167 (23%), Positives = 64/167 (38%), Gaps = 8/167 (4%)
Query: 49 PLEGDELDVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEI 108
P+E V G DA +AG PE IK + + + + DD +S +
Sbjct: 400 PVEWSRNVVLPTGGDAI-IAGAA-AAPEEIKADAENGEAGEARKRKHDDSSDSPAPVTTK 457
Query: 109 KKDVKETE---KENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSD---SDFSPPR 162
K KE E E ++ K + ++ EA + K KKK + + + P+
Sbjct: 458 KSKTKEVEGEEAEEKVKSSKKKKKKDKEEEKEEEAGSEKKEKKKKKDKKEEVIEEVASPK 517
Query: 163 RGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDK 209
K+ + D S K E ++ +K KK D+E D+
Sbjct: 518 SEKKKKKKSKDTEAAVDAEDESAAEKSEKKKKKKDKKKKNKDSEDDE 564
Score = 29.1 bits (62), Expect = 9.5
Identities = 23/116 (19%), Positives = 47/116 (40%), Gaps = 1/116 (0%)
Query: 135 PNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRA 194
P +A +G A + ++ +D++ K ++S + S ++ EG+ A
Sbjct: 410 PTGGDAIIAGAAAAPEEIKADAENGEAGEARKRKHDDSSDSPAPVTTKKSKTKEVEGEEA 469
Query: 195 EKLKKPSRWDNEQDK-SPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMKIQKR 249
E+ K S+ ++DK K A + ++ K + S E K +K+
Sbjct: 470 EEKVKSSKKKKKKDKEEEKEEEAGSEKKEKKKKKDKKEEVIEEVASPKSEKKKKKK 525
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 38.7 bits (86), Expect = 0.012
Identities = 41/179 (22%), Positives = 85/179 (47%), Gaps = 21/179 (11%)
Query: 79 KKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKE---NELVFGKMYSDSEDDKP 135
KK E+ T K + + DD + + +E +++ K EKE E + SED+ P
Sbjct: 503 KKSEEATKVVKKSLAHSDDESEEEKEEEEKQEEEKAEEKEEKKEEENENGIPDKSEDEAP 562
Query: 136 NVSEASPSGRAKSKKKHNSDSDFSPPRRGNPV---KRNNSPK---RTTEYDSDLSPPRKH 189
SE+ K + + +S+ + + +RG+ + K+ ++ + + + SPP K
Sbjct: 563 QPSES----EEKDESEEHSEEETTKKKRGSRLSAGKKESAGRARNKKAVVAAKSSPPEKI 618
Query: 190 EGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMKIQK 248
+R+ +K + D++ D SPK+ + +R KS +P + + S+ +E +++
Sbjct: 619 TQKRSSAKRK--KTDDDSDTSPKA----SSKRKKSE--NPIKASPAPSKSASKEKPVKR 669
Score = 37.1 bits (82), Expect = 0.036
Identities = 35/161 (21%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 72 DERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSE 131
+E E +KQE+ K + +++ + ++ E+E+++E + +S+ E
Sbjct: 524 EEEKEEEEKQEEEKAEEKEEKKEEENENGIPDKSEDEAPQPSESEEKDE---SEEHSEEE 580
Query: 132 DDKP------NVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSP 185
K + + +GRA++KK + SPP + KR+++ ++ T+ DSD SP
Sbjct: 581 TTKKKRGSRLSAGKKESAGRARNKKAVVAAKS-SPPEKITQ-KRSSAKRKKTDDDSDTSP 638
Query: 186 PRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSD 226
+ +++E K S ++ K ++ + K SD
Sbjct: 639 KASSKRKKSENPIKASPAPSKSASKEKPVKRAGKGKDKPSD 679
Score = 30.3 bits (65), Expect = 4.1
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 7/109 (6%)
Query: 94 NQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKH- 152
++D+ N K++ ++ K+D KE +++ +S+ K S G+ + K K
Sbjct: 247 SEDENDNEKVESKDAKEDEKEETNDDK---EDEKEESKGSKKRGKGTSSGGKVREKNKTE 303
Query: 153 --NSDSDFSPPRRGNPVKRNNSPKRTTE-YDSDLSPPRKHEGQRAEKLK 198
D++ P PV+ S +R D D S + E R LK
Sbjct: 304 EVKKDAEPRTPFSDRPVRERKSVERLVALIDKDSSKEFRVEKGRGAYLK 352
Score = 29.9 bits (64), Expect = 5.4
Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 4/160 (2%)
Query: 86 TSSKWKIVNQDDGFNSKLQIQ-EIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSG 144
T+ K I+ + F K + ++ D +EKE K + P +S
Sbjct: 438 TTKKEDIITKLFEFLEKPHVTGDVTGDTTVSEKEKSSKGAKRKRTPKKTSPTAGSSSSKR 497
Query: 145 RAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWD 204
AKS+KK + + + K E + K E + E+ + D
Sbjct: 498 SAKSQKKSEEATKVVKKSLAHSDDESEEEKEEEEKQEEEKAEEKEE--KKEEENENGIPD 555
Query: 205 NEQDKSPKSLRANNHRRSKS-SDLSPPRKTQTNKISSGQE 243
+D++P+ + S+ S+ +K + +++S+G++
Sbjct: 556 KSEDEAPQPSESEEKDESEEHSEEETTKKKRGSRLSAGKK 595
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 38.7 bits (86), Expect = 0.012
Identities = 44/212 (20%), Positives = 80/212 (37%), Gaps = 8/212 (3%)
Query: 50 LEGDELDVYDEGDDAPQVAGIIDERPE-HIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEI 108
LE E DV E + G + E +K+ + + K K + + N K ++
Sbjct: 99 LEVKESDVKVEEHEKEHKKGKEKKHEELEEEKEGKKKKNKKEKDESGPEEKNKKADKEKK 158
Query: 109 KKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVK 168
+DV + ++E E GK E D+ E + + K+K S S+ +G K
Sbjct: 159 HEDVSQEKEELEEEDGKKNKKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEK 218
Query: 169 ------RNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSP-KSLRANNHRR 221
++ E+D ++ + ++ +K +K E+ K P K + +
Sbjct: 219 GEKGDLEKEDEEKKKEHDETDQEMKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDEST 278
Query: 222 SKSSDLSPPRKTQTNKISSGQEMKIQKRYDVT 253
K +K + K E K K +D T
Sbjct: 279 EKEDKKLKGKKGKGEKPEKEDEGKKTKEHDAT 310
Score = 37.1 bits (82), Expect = 0.036
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 14/123 (11%)
Query: 79 KKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVS 138
KK+E+ + + K V +D + L+ + + +D+K E E E K D+E+ K +
Sbjct: 364 KKKEKKSEKGE-KDVKEDKKKENPLETEVMSRDIKLEEPEAEK---KEEDDTEEKKKSKV 419
Query: 139 EASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRT--TEYDSDLSPPRKHEGQRAEK 196
E S K KKK + ++ N K PK T E D S K EG +A++
Sbjct: 420 EGGESEEGKKKKKKD--------KKKNKKKDTKEPKMTEDEEEKKDDSKDVKIEGSKAKE 471
Query: 197 LKK 199
KK
Sbjct: 472 EKK 474
Score = 34.7 bits (76), Expect = 0.19
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 73 ERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSED 132
E PE KK+E T K V +G S+ ++ KKD K+ K+ + KM D E+
Sbjct: 399 EEPEAEKKEEDDTEEKKKSKV---EGGESEEGKKKKKKD-KKKNKKKDTKEPKMTEDEEE 454
Query: 133 DKPNVSEASPSG-RAKSKKKHNSDSDFSPPRRGNPV 167
K + + G +AK +KK D D + GN +
Sbjct: 455 KKDDSKDVKIEGSKAKEEKK---DKDVKKKKGGNDI 487
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles
PF01846: FF domain, PF00397: WW domain
Length = 946
Score = 38.3 bits (85), Expect = 0.015
Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 4/152 (2%)
Query: 76 EHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKP 135
E K++E+ K V ++ + K + ++ K+ +E E+E E GK S E+
Sbjct: 792 EKAKEKERKRDEEK---VRKEKERDEKEKRKDKDKERREKEREREKEKGKERSKREESDG 848
Query: 136 NVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAE 195
+ G K +K+ D D RR + + + D RKH R +
Sbjct: 849 ETAMDVSEGH-KDEKRKGKDRDRKHRRRHHNNSDEDVSSDRDDRDESKKSSRKHGNDRKK 907
Query: 196 KLKKPSRWDNEQDKSPKSLRANNHRRSKSSDL 227
K + ++E + K + + RRS + +L
Sbjct: 908 SRKHANSPESESENRHKRQKKESSRRSGNDEL 939
Score = 35.9 bits (79), Expect = 0.083
Identities = 28/133 (21%), Positives = 50/133 (37%), Gaps = 5/133 (3%)
Query: 102 KLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPP 161
K + +E K+D ++ KE E + + DK R K K K S + S
Sbjct: 793 KAKEKERKRDEEKVRKEKE----RDEKEKRKDKDKERREKEREREKEKGKERSKREESDG 848
Query: 162 RRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRR 221
V + ++ D D R+H E + R D ++ K N+ ++
Sbjct: 849 ETAMDVSEGHKDEKRKGKDRDRKHRRRHHNNSDEDVSS-DRDDRDESKKSSRKHGNDRKK 907
Query: 222 SKSSDLSPPRKTQ 234
S+ SP +++
Sbjct: 908 SRKHANSPESESE 920
>At4g31880.1 68417.m04531 expressed protein
Length = 873
Score = 37.5 bits (83), Expect = 0.027
Identities = 33/168 (19%), Positives = 70/168 (41%), Gaps = 2/168 (1%)
Query: 82 EQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEAS 141
E + + K +V DDG L ++ K + + ++ + E+D V
Sbjct: 629 ESYDAAKKKHLVIYDDGDQEILYLKNQKWSPLDESELSQDEEAADQTGQEEDASTVPLTK 688
Query: 142 PSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPS 201
+ K K NS + + K + K + D + + + + A + ++ S
Sbjct: 689 KAKTGKQSKMDNSSAKKGSGAGSSKAKATPASKSSKTSQDDKTASKSKDSKEASREEEAS 748
Query: 202 -RWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMKIQK 248
++E+++ PK++ + RSK D+S K+ +K SS ++ + K
Sbjct: 749 SEEESEEEEPPKTVGKSGSSRSK-KDISSVSKSGKSKASSKKKEEPSK 795
Score = 31.5 bits (68), Expect = 1.8
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 17/163 (10%)
Query: 85 TTSSKWKIVNQDDGFNSKLQI-------QEIKKDVKETEKENELVFGKMYSDSEDDKPNV 137
T +SK +QDD SK + +E + + E+E GK S S K ++
Sbjct: 717 TPASKSSKTSQDDKTASKSKDSKEASREEEASSEEESEEEEPPKTVGK--SGSSRSKKDI 774
Query: 138 SEASPSGRAKS---KKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRA 194
S S SG++K+ KK+ S + S + PVK + +T + +
Sbjct: 775 SSVSKSGKSKASSKKKEEPSKATTSSKSKSGPVKSVPAKSKTGK-----GKAKSGSASTP 829
Query: 195 EKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNK 237
K S ++E +++PK +S S S + + K
Sbjct: 830 ASKAKESASESESEETPKEPEPATKAKSGKSQGSQSKSGKKRK 872
Score = 29.5 bits (63), Expect = 7.2
Identities = 42/168 (25%), Positives = 66/168 (39%), Gaps = 14/168 (8%)
Query: 76 EHIKKQEQFTTSSKWKIVNQDDGFNSKLQ-IQEIKKDVKET--EKENELVFGKMYSDSED 132
+ +KKQ+ T +K + D+ N+ L E K DV+ EKENE K +D
Sbjct: 320 DSMKKQDD--TGAKDEPQQLDNPRNTDLNNTTEEKPDVEHQIEEKENESSSVKQ-ADLSK 376
Query: 133 DKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQ 192
D E P+ SK D SPP + +S + L P K G
Sbjct: 377 DSDIKEETEPAELLDSK-----DVLTSPPVDSSVTAATSSENEKNKSVQIL--PSKTSGD 429
Query: 193 RAEKLKKPSRWDNEQDKSPKSLRANNHRR-SKSSDLSPPRKTQTNKIS 239
+ PS + ++S AN ++ S + ++ P T ++S
Sbjct: 430 ETANVSSPSMAEELPEQSVPKKTANQKKKESSTEEVKPSASIATEEVS 477
>At5g61150.2 68418.m07672 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 623
Score = 37.1 bits (82), Expect = 0.036
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 101 SKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSP 160
S+ + +E + + +E E+E G+ DSED+ +E R KS + + D +
Sbjct: 520 SESEREESEYETEEEEEEKSPARGRG-KDSEDEYEEDAEEDEEERGKSNRYSDEDEEEEE 578
Query: 161 PRRGNPVKRNNSPKRT-TEYDSDLSPPRK 188
R R + KR E D + SPPRK
Sbjct: 579 GGRAEKDHRGSGRKRKGIESDEEESPPRK 607
Score = 31.5 bits (68), Expect = 1.8
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 107 EIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNP 166
E ++D +E E+E D E+++ +E G + +K SD + SPPR+
Sbjct: 551 EYEEDAEEDEEERGKSNRYSDEDEEEEEGGRAEKDHRGSGRKRKGIESDEEESPPRKAPT 610
Query: 167 VKR 169
+R
Sbjct: 611 HRR 613
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 36.7 bits (81), Expect = 0.047
Identities = 39/196 (19%), Positives = 90/196 (45%), Gaps = 9/196 (4%)
Query: 51 EGDELDVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQ-EIK 109
+G E + D+ + + Q +R K++E+ +SS+ + ++++ K++ + K
Sbjct: 429 KGKESETKDKEESSSQEES--KDRETETKEKEE--SSSQEETMDKETEAKEKVESSSQEK 484
Query: 110 KDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKR 169
+ KETEK E F + + ED+ E+S + + K+ D++ S + K
Sbjct: 485 NEDKETEKI-ESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDKE 543
Query: 170 NNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSP 229
N K E S +++E + EK + S+ + ++ ++ K + + + ++ +
Sbjct: 544 NE--KIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKE-KE 600
Query: 230 PRKTQTNKISSGQEMK 245
K + + +S +E K
Sbjct: 601 NEKIEKEESASQEETK 616
Score = 33.5 bits (73), Expect = 0.44
Identities = 37/174 (21%), Positives = 70/174 (40%), Gaps = 11/174 (6%)
Query: 72 DERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETE-KENELVFGKMYS-D 129
+E E K + F +K K +D+ + + K + KETE K+NE + + D
Sbjct: 485 NEDKETEKIESSFLEETKEK---EDETKEKEESSSQEKTEEKETETKDNEESSSQEETKD 541
Query: 130 SEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKH 189
E++K EAS +K + + + S + K N ++ + +P +
Sbjct: 542 KENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEK-----EESAPQEET 596
Query: 190 EGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQE 243
+ + EK++K E+ K K S S++ T++ K +E
Sbjct: 597 KEKENEKIEKEESASQEETKE-KETETKEKEESSSNESQENVNTESEKKEQVEE 649
Score = 33.5 bits (73), Expect = 0.44
Identities = 33/175 (18%), Positives = 74/175 (42%), Gaps = 6/175 (3%)
Query: 72 DERPEHIKKQEQFTTS-SKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDS 130
D+ E I+K+E + SK + S Q + +K+ ++ EKE E + +
Sbjct: 541 DKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKE-ESAPQEETKEK 599
Query: 131 EDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHE 190
E++K E++ K K+ + + S S K+ +++ +K +
Sbjct: 600 ENEKIEKEESASQEETKEKETETKEKEESSSNESQENVNTESEKKEQVEENE----KKTD 655
Query: 191 GQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMK 245
+E K+ S D EQ +S ++ ++ ++++ + ++ + QE+K
Sbjct: 656 EDTSESSKENSVSDTEQKQSEETSEKEESNKNGETEVTQEQSDSSSDTNLPQEVK 710
Score = 30.7 bits (66), Expect = 3.1
Identities = 29/174 (16%), Positives = 73/174 (41%), Gaps = 6/174 (3%)
Query: 81 QEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEA 140
+E+ +SS+ K +++ ++E K+ ET+++ E + + E + + E+
Sbjct: 474 KEKVESSSQEKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEES 533
Query: 141 SPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKP 200
S + ++K K N + K N + + E S ++ E ++ EK +
Sbjct: 534 S--SQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESA 591
Query: 201 SRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMKIQKRYDVTS 254
+ + ++ ++ K S S + + ++T+T + + Q+ + S
Sbjct: 592 PQEETKEKENEKI----EKEESASQEETKEKETETKEKEESSSNESQENVNTES 641
Score = 29.9 bits (64), Expect = 5.4
Identities = 26/140 (18%), Positives = 59/140 (42%), Gaps = 5/140 (3%)
Query: 116 EKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNS-DSDFSPPRRGNPVKRNNSPK 174
+KENE+V G + ++ + VS + + KK + +R N + K
Sbjct: 98 DKENEIVEGGEENKEKESEGIVSNEDSNSEIEEKKDSGGVEESEVEEKRDNGGGTEENEK 157
Query: 175 RTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRK-- 232
TE +S++ + + G + + E+ K N ++ S++ ++
Sbjct: 158 SGTE-ESEVEERKDNGGTEENEKSGTEESEVEERKDNGGTEENEKSGTEESEVEERKENG 216
Query: 233 -TQTNKISSGQEMKIQKRYD 251
T+ N+ S +E +++++ D
Sbjct: 217 GTEENEKSGSEESEVEEKKD 236
Score = 29.1 bits (62), Expect = 9.5
Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 8/172 (4%)
Query: 82 EQFTTSSKWKIVNQDDGFNSKLQIQE----IKKDVKETEKENELVFGKMYSDSEDDKPNV 137
E+ T SS + +G S+ + E ++K+ ++ E+ V GK +
Sbjct: 361 EKSTGSSSGHESDSLEGIKSEGESMEKNELLEKEFNDSNGESS-VTGKSTGSGDGGSQET 419
Query: 138 SEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKL 197
SE S + +SK K + D K + + E S E + EK+
Sbjct: 420 SEVS--SQEESKGKESETKDKEESSSQEESKDRETETKEKEESSSQEETMDKETEAKEKV 477
Query: 198 KKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMKIQKR 249
+ S+ NE DK + + ++ +K + K +++ +E + + +
Sbjct: 478 ESSSQEKNE-DKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETK 528
Score = 29.1 bits (62), Expect = 9.5
Identities = 30/152 (19%), Positives = 61/152 (40%), Gaps = 6/152 (3%)
Query: 88 SKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAK 147
SK K D S Q +E K ET+++ E + D E + E+S + +
Sbjct: 428 SKGKESETKDKEESSSQ-EESKDRETETKEKEESSSQEETMDKETEAKEKVESSSQEKNE 486
Query: 148 SKKKHNSDSDF--SPPRRGNPVK---RNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSR 202
K+ +S F + + K ++S ++T E +++ + Q K K+ +
Sbjct: 487 DKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDKENEK 546
Query: 203 WDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQ 234
+ E+ S + + N + + S +T+
Sbjct: 547 IEKEEASSQEESKENETETKEKEESSSQEETK 578
>At2g14140.1 68415.m01575 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 847
Score = 36.7 bits (81), Expect = 0.047
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 10/128 (7%)
Query: 515 EKYKRWSKGLKQLEAQEERLQDFMHEASKPLARHRDDADSENRLKQIERAGDPMLRYIQD 574
EK + +G +++E +EE+ ++ E + +R D +E + +I + GD + ++
Sbjct: 504 EKQEIPKQGDEEMEGEEEKQEEEGKEEEEEKVEYRGDEGTEKQ--EIPKQGDEEMEGEEE 561
Query: 575 RKREEGNLPPERP---KYKG-----NFPPNRFNLRPGYRWDGVDRSNGYEKKFFEQQSKR 626
++ EEG E +YK N P + ++R G E+K E
Sbjct: 562 KQEEEGKEEEEEKICVEYKDHHSTCNVEETEKQENPKQGDEEMEREEGKEEKVEEHDEYN 621
Query: 627 KAQEEEAY 634
A ++EAY
Sbjct: 622 DAADQEAY 629
Score = 36.3 bits (80), Expect = 0.062
Identities = 28/119 (23%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 515 EKYKRWSKGLKQLEAQEERLQDFMHEASKPLARHRDDADSENRLKQIERAGDPMLRYIQD 574
EK + +G +++E +EE+ ++ E + +R D ++E + +I + GD + ++
Sbjct: 464 EKQEIPKQGDEEMEGEEEKQEEEGKEKEEEKVEYRGDEETEKQ--EIPKQGDEEMEGEEE 521
Query: 575 RKREEG-NLPPERPKYKGNFPPNRFNLRPGYRWDGVDRSNGYEKKFFEQQSKRKAQEEE 632
++ EEG E+ +Y+G+ + + G + G E+K Q+ + K +EEE
Sbjct: 522 KQEEEGKEEEEEKVEYRGDEGTEKQEIPK----QGDEEMEGEEEK---QEEEGKEEEEE 573
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 36.3 bits (80), Expect = 0.062
Identities = 72/321 (22%), Positives = 111/321 (34%), Gaps = 31/321 (9%)
Query: 132 DDKPNVSEASPS---GRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRK 188
D +P++ + PS R+ S K+ S S PRR ++ SP + ++ SP +
Sbjct: 364 DRQPDIVDDHPSKSRSRSLSPKRTVSKSTSVSPRRS----QSKSPSSSPRWNGGRSPAK- 418
Query: 189 HEGQRAEKLKKPSRWDNEQDKSPKSLRANNH-RRS--KSSDLSPPRKTQTNKISSGQEMK 245
G R K N + +SP S H RRS KS SP R + IS
Sbjct: 419 --GSRQVK-----NLTNSRRESPGSEEKGRHVRRSPTKSVSRSPVRVKKERDISRSPSKS 471
Query: 246 IQKRYDVTSPXXXXXXXXXXNRLNXXXXXXXXXXXXXXXFGH-----DNKQSQLKKYNDT 300
+ R + SP R+ G +++S + +
Sbjct: 472 LS-RSPLRSPKRVISRSPVRGRIARSPSRSPVRSASRGSLGRGPLRRSSRRSPSRSPVRS 530
Query: 301 DYGXXXXXXXXXXXXXXXXXPPRKSKRQISESPCRNVPLRKKTNDSDSDLSPPRKNI-RY 359
P R S+R +S SP R+ RK S S + RK++ R
Sbjct: 531 SRRSLSRSPIQLSRRSLSRSPTRLSRRSLSRSPIRSP--RKSV--SRSPVRSSRKSVSRS 586
Query: 360 AENKSYRNVSKKPHRRNDTKDSGSDLSPPRKLKNIDNYRRHYSEXXXXXXXXXXXXXXXX 419
S R +S+ P R + S S + R ++I S
Sbjct: 587 PVRSSRRRISRSPVRSSRKSVSRSPIRLSR--RSISRSPIRLSRRSISRSPVRGRRRISR 644
Query: 420 LSPPRKDRSNKNDSPPPTHKK 440
P + RS + SPPP ++
Sbjct: 645 SPVPARRRSVRPRSPPPDRRR 665
Score = 31.5 bits (68), Expect = 1.8
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 8/115 (6%)
Query: 109 KKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPR--RGNP 166
K D K+ K + + + +S S S+ SDSD S P +
Sbjct: 181 KSDGKKNGKHKKSLRVRRKKRRRHSSSESESSSDSETDSSESDSESDSDLSSPSFLSSSS 240
Query: 167 VKRNNSPKRTTEYDS---DLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANN 218
+R KR+++ D ++HE +R+ + K+P R + +SP SL +N
Sbjct: 241 HERQKKRKRSSKKDKHRRSKQRDKRHEKKRSMRDKRPKR---KSRRSPDSLEDSN 292
Score = 29.5 bits (63), Expect = 7.2
Identities = 27/134 (20%), Positives = 50/134 (37%), Gaps = 3/134 (2%)
Query: 119 NELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTE 178
N +VFGK+ E K G+ K ++S ++ + K+N K++
Sbjct: 136 NNVVFGKLIQGKEILKKIERVGDEEGKPTVSVKIIRCGEYSGDKKKSDGKKNGKHKKSLR 195
Query: 179 YDSDLSPPRKHEGQRAEKLKKPSRWDNEQD-KSPKSLRANNHRRSKSSDLSPPRKTQTNK 237
R+H +E +E D +S L + + S S + RK + K
Sbjct: 196 VRR--KKRRRHSSSESESSSDSETDSSESDSESDSDLSSPSFLSSSSHERQKKRKRSSKK 253
Query: 238 ISSGQEMKIQKRYD 251
+ + KR++
Sbjct: 254 DKHRRSKQRDKRHE 267
Score = 29.1 bits (62), Expect = 9.5
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 130 SEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKH 189
S+ K + S R K +++H+S S + +S + +E DSDLS P
Sbjct: 182 SDGKKNGKHKKSLRVRRKKRRRHSSSESES-----SSDSETDSSESDSESDSDLSSPSFL 236
Query: 190 EGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRK 232
E+ KK R +++DK HRRSK D +K
Sbjct: 237 SSSSHERQKKRKR-SSKKDK---------HRRSKQRDKRHEKK 269
>At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing
protein
Length = 527
Score = 35.9 bits (79), Expect = 0.083
Identities = 37/178 (20%), Positives = 72/178 (40%), Gaps = 6/178 (3%)
Query: 76 EHIKKQ-EQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDK 134
E+++K E+ S+K K + ++ + +E + E E E V + D +
Sbjct: 7 EYLEKTVEEGAGSNKKKEESGNERSERSYRKREGGERQGEEGGEEERVSSRSKKSRGDGE 66
Query: 135 PNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYD-SDLSPPRKHEGQR 193
N R + + + D + R G+ K ++ + + E D SD PR E +
Sbjct: 67 ENGGGKRDRERERHRSSRDKDRERDKVREGSRDKESDRERSSKERDRSDRDKPRDRERR- 125
Query: 194 AEKLKKPSRWDNEQDKSPKSLR--ANNHRRSKSSDLSPPRKTQTNKISSGQEMKIQKR 249
E+ K+ S ++K P+ + + HR K + P + Q + +K +R
Sbjct: 126 -EREKRSSSRSRREEKEPEVVERGSRRHRDKKDEPEADPERDQRTVFAYQMPLKATER 182
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 35.9 bits (79), Expect = 0.083
Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 9/157 (5%)
Query: 94 NQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKP---NVSEASPSGRAKSKK 150
N++D K+Q E + VKE+ K NE +S+++KP E+S G K ++
Sbjct: 295 NEEDE-KEKVQSSEEESKVKESGK-NEKDASSSQDESKEEKPERKKKEESSSQGEGKEEE 352
Query: 151 KHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKS 210
+ + S + + K + E S E + EK + S+ NE ++
Sbjct: 353 PEKREKEDSSSQEES--KEEEPENKEKEASSSQEENEIKETEIKEKEESSSQEGNENKET 410
Query: 211 PKSLRANNHRRSKSSD--LSPPRKTQTNKISSGQEMK 245
K + + + +S+ + T ++ G E K
Sbjct: 411 EKKSSESQRKENTNSEKKIEQVESTDSSNTQKGDEQK 447
>At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profile:
PF00076 RNA recognition motif
Length = 636
Score = 35.9 bits (79), Expect = 0.083
Identities = 37/182 (20%), Positives = 64/182 (35%), Gaps = 6/182 (3%)
Query: 72 DERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSE 131
DE +KKQ +K + + DD +S + +KK EK S
Sbjct: 160 DEETVPVKKQPAVLEKAKIESSSSDDDSSSDEETVPMKKQTAVLEKAKAESSSSDDGSSS 219
Query: 132 DDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEG 191
D++P ++ P KK +SD S K+ + + + +S S
Sbjct: 220 DEEPTPAKKEPI----VVKKDSSDESSSDEETPVVKKKPTTVVKDAKAESSSSEEESSSD 275
Query: 192 QRAEKLKKPSRWDNEQD--KSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMKIQKR 249
KKP+ N + K S ++ + P +K + + +S QE +
Sbjct: 276 DEPTPAKKPTVVKNAKPAAKDSSSSEEDSDEEESDDEKPPTKKAKVSSKTSKQESSSDES 335
Query: 250 YD 251
D
Sbjct: 336 SD 337
Score = 34.7 bits (76), Expect = 0.19
Identities = 40/169 (23%), Positives = 64/169 (37%), Gaps = 17/169 (10%)
Query: 72 DERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSE 131
DE +KKQ +K + + DDG +S + KK+ +K++ + SD E
Sbjct: 190 DEETVPMKKQTAVLEKAKAESSSSDDGSSSDEEPTPAKKEPIVVKKDSS---DESSSDEE 246
Query: 132 DD----KPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSP----KRTTEYDSDL 183
KP + S ++ +S D P + V +N P ++E DSD
Sbjct: 247 TPVVKKKPTTVVKDAKAESSSSEEESSSDDEPTPAKKPTVVKNAKPAAKDSSSSEEDSDE 306
Query: 184 ------SPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSD 226
PP K ++ K+ S D D+S K + K D
Sbjct: 307 EESDDEKPPTKKAKVSSKTSKQESSSDESSDESDKEESKDEKVTPKKKD 355
Score = 31.9 bits (69), Expect = 1.3
Identities = 37/164 (22%), Positives = 58/164 (35%), Gaps = 8/164 (4%)
Query: 72 DERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSE 131
DE +KKQ +K + + DD +S + +KK EK ++ DS
Sbjct: 130 DEETAPVKKQPAVLEKAKVESSSSDDDSSSDEETVPVKKQPAVLEKA-KIESSSSDDDSS 188
Query: 132 DDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEG 191
D+ V + + K +S SD P P + SD S +
Sbjct: 189 SDEETVPMKKQTAVLEKAKAESSSSDDGSSSDEEPTPAKKEPIVVKKDSSDES---SSDE 245
Query: 192 QRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQT 235
+ KKP+ K K+ +++ S S D P K T
Sbjct: 246 ETPVVKKKPT----TVVKDAKAESSSSEEESSSDDEPTPAKKPT 285
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 35.5 bits (78), Expect = 0.11
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
Query: 148 SKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKL-KKPSRWDNE 206
S H S+ PP N +R N+P + ++ PP+ ++ +R + R DN
Sbjct: 73 SYNHHQRSSNIGPPPP-NQHRRYNAPDNQHQRSDNIGPPQPNQHRRYNAPDNQHQRSDNS 131
Query: 207 QDKSPKSLRANN-----HRRSKSSDLSPPRKTQTNKIS 239
P R NN H+RS + PP + + N S
Sbjct: 132 GPPQPYRHRRNNAPENQHQRSDNIGPPPPNRQRRNNAS 169
>At5g42540.1 68418.m05178 5'-3' exoribonuclease (XRN2) identical to
XRN2 [Arabidopsis thaliana] GI:11875630; contains Pfam
domain PF03159: Putative 5'-3' exonuclease domain
Length = 1012
Score = 35.1 bits (77), Expect = 0.14
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 151 KHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKS 210
K N SPP K+ NSP+R + D +P + ++++KLK + + + K
Sbjct: 890 KDNGIQWISPPPSQITPKKMNSPQRQKAWKKDETPQSR---EKSKKLKSSLKVNPLKMKK 946
Query: 211 PKSLRANNHRRSKSSDLSPPRK 232
KS + R K +++P RK
Sbjct: 947 TKSPQREFTREKKKENITPQRK 968
>At2g35670.1 68415.m04375 transcription factor, putative /
fertilization-independent seed 2 protein (FIS2)
identical to GB:AF096095
Length = 632
Score = 35.1 bits (77), Expect = 0.14
Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Query: 128 SDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPR 187
S+ D ++ + + ++ K H +D + S P R + N + D SPPR
Sbjct: 137 SEKISDILTTTQLAIAESSEPKVPHVNDGNVSSPPRAHSSAEKNESTHVNDDDDVSSPPR 196
Query: 188 KHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISS 240
H ++ E + K+ S + N D+S P +T+++K +S
Sbjct: 197 AHSLEKNESTHVNEDNISSPPKAHSS-KKNESTHMNDEDVSFPPRTRSSKETS 248
>At5g61150.1 68418.m07671 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 625
Score = 34.7 bits (76), Expect = 0.19
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 101 SKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSP 160
S+ + +E + + +E E+E G+ DSED+ +E R KS + + D +
Sbjct: 520 SESEREESEYETEEEEEEKSPARGRG-KDSEDEYEEDAEEDEEERGKSNRYSDEDEEEEE 578
Query: 161 PRRGNPVK--RNNSPKRT-TEYDSDLSPPRK 188
G K R + KR E D + SPPRK
Sbjct: 579 VAGGRAEKDHRGSGRKRKGIESDEEESPPRK 609
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 34.7 bits (76), Expect = 0.19
Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 16/160 (10%)
Query: 96 DDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDK------PNVSEASPSGRAKSK 149
D+ N KL+ ++ ++ +E +KE + D D+K A R K K
Sbjct: 130 DEKVNEKLEAEQRSEERRERKKEKKKKKNNKDEDVVDEKVKEKLEDEQKSADRKERKKKK 189
Query: 150 KKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDK 209
K N+D D + K + K +++ +K++ + K+ + ++EQ
Sbjct: 190 SKKNNDEDVVDEKE----KLEDEQK-----SAEIKEKKKNKDEDVVDEKEKEKLEDEQRS 240
Query: 210 SPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMKIQKR 249
+ R+S +S RK++ K S +EM ++R
Sbjct: 241 GERKKEKKKKRKSDEEIVSEERKSK-KKRKSDEEMGSEER 279
Score = 33.5 bits (73), Expect = 0.44
Identities = 37/174 (21%), Positives = 73/174 (41%), Gaps = 8/174 (4%)
Query: 54 ELDVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVK 113
+ DV DE + A E KK+++ ++K + V D+ KL+ ++ D K
Sbjct: 125 DADVVDEKVNEKLEAEQRSEERRERKKEKKKKKNNKDEDV-VDEKVKEKLEDEQKSADRK 183
Query: 114 ETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSP 173
E +K+ D D+K + + S K KKK N D D + ++
Sbjct: 184 ERKKKKSKKNND--EDVVDEKEKLEDEQKSAEIKEKKK-NKDEDVVDEKEKEKLE---DE 237
Query: 174 KRTTEYDSDLSPPRKHEGQ-RAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSD 226
+R+ E + RK + + +E+ K + ++++ + ++ R+ K D
Sbjct: 238 QRSGERKKEKKKKRKSDEEIVSEERKSKKKRKSDEEMGSEERKSKKKRKLKEID 291
>At3g43590.1 68416.m04638 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 551
Score = 34.7 bits (76), Expect = 0.19
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 128 SDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPP- 186
+ S+ K + ++ S +++ K K NS+ D S P N + K+T + + + P
Sbjct: 373 NSSQVSKRDRETSTTSHKSRKKNKENSEHD-STPHESNGKTKKKKKKKTHKEEQPQTSPR 431
Query: 187 -RKHEGQRAEKLKKPSRWDNEQDKSPKS-LRANNHRRSKSSDLSPPRKTQTNKISSG 241
RKH G + + + + + PKS + + + RS S+ + ++ K +SG
Sbjct: 432 KRKHRGGWITEEPEEESFQRGKMRRPKSPITPSGYNRSPSTHIG--HNYRSPKFNSG 486
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 34.3 bits (75), Expect = 0.25
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 175 RTTEYDSDLSPPRKH-EGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSS--DLSPPR 231
R D + SP R+H +G+R EK + D E+D + +R +HRR K D R
Sbjct: 13 REERADYEGSPVREHRDGRRKEKDHRSK--DKEKDYDREKIRDKDHRRDKEKERDRKRSR 70
Query: 232 KTQTNK-ISSGQEMKIQK 248
T K IS G++ + +K
Sbjct: 71 DEDTEKEISRGRDKEREK 88
>At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing
protein
Length = 987
Score = 34.3 bits (75), Expect = 0.25
Identities = 30/164 (18%), Positives = 60/164 (36%), Gaps = 2/164 (1%)
Query: 86 TSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGR 145
T S+ + V K + +E+K K + + K S + + R
Sbjct: 655 TRSRSRSVEDSADIKDKSRDEELKHHKKRSRSRSREDRSKTRDTSRNSDEAKQKHRQRSR 714
Query: 146 AKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDN 205
++S + N + + N + +S +R+ D D + R+ L+ +R
Sbjct: 715 SRSLENDNGSHENVDVAQDNDLNSRHSKRRSKSLDEDYDMKERRGRSRSRSLETKNRSSR 774
Query: 206 EQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMKIQKR 249
+ + RRS+S S K NK + ++ K ++R
Sbjct: 775 KNKLDEDRNTGSRRRRSRSK--SVEGKRSYNKETRSRDKKSKRR 816
Score = 30.7 bits (66), Expect = 3.1
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 149 KKKHNSDSDFSPPRR-GNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQ 207
++ + D S RR G + ++S R + +SP ++ GQ +L + R + +
Sbjct: 564 RRSYRDSRDISESRRYGRSDEHHSSSSRRSR---SVSPKKRKSGQEDSELSRLRRDSSSR 620
Query: 208 DKSPKSLRANNHRRSKSSDLSPPRKTQTNKI 238
+ S + R + S PR + NK+
Sbjct: 621 GEKKSSRAGSRSPRRRKEVKSTPRDDEENKV 651
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 34.3 bits (75), Expect = 0.25
Identities = 34/161 (21%), Positives = 62/161 (38%), Gaps = 5/161 (3%)
Query: 56 DVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQE-IKKDVKE 114
D DD+ + ++P K + +K + ++DD + ++ K K
Sbjct: 122 DSSSSDDDSSDEEVAVTKKPAAAAKNG--SVKAKKESSSEDDSSSEDEPAKKPAAKIAKP 179
Query: 115 TEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRG-NPVKRNNSP 173
K++ DSED+KP +A+P+ + +SD D P ++
Sbjct: 180 AAKDSSSSDDDSDEDSEDEKPATKKAAPAAAKAASSSDSSDEDSDEESEDEKPAQKKADT 239
Query: 174 KRTTEYDSD-LSPPRKHEGQRAEKLKKPSRWDNEQDKSPKS 213
K + + SD S + E + E+ K D E + KS
Sbjct: 240 KASKKSSSDESSESEEDESEDEEETPKKKSSDVEMVDAEKS 280
Score = 33.1 bits (72), Expect = 0.58
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 13/147 (8%)
Query: 96 DDGFNSKLQIQEIKKDV-------KETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKS 148
+D ++K+ +++ KKDV K +K + V SDSE ++ ++ P+ +A S
Sbjct: 28 EDDIDTKVSLKKQKKDVIAAVQKEKAVKKVPKKVESSDDSDSESEEEEKAKKVPAKKAAS 87
Query: 149 KKKHNSD---SDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDN 205
+SD SD P + N + + ++ DS S + + KKP+
Sbjct: 88 SSDESSDDSSSDDEPAPKKAVAATNGTVAKKSKDDSSSSDDDSSD-EEVAVTKKPAA--A 144
Query: 206 EQDKSPKSLRANNHRRSKSSDLSPPRK 232
++ S K+ + ++ SS+ P +K
Sbjct: 145 AKNGSVKAKKESSSEDDSSSEDEPAKK 171
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 33.9 bits (74), Expect = 0.33
Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 8/118 (6%)
Query: 128 SDSEDDKPNVSEASPSGRAKSKKKHNSDS------DFSPPRRGNPVKRNNSPKRTTEYDS 181
+D++D+K V PS + S KK +S D P +G+ S K+ + S
Sbjct: 322 TDTDDEKDEVEVEKPSKKKSSSKKTVEESSGSKGKDKQPSAKGSARSGEKSSKQIAK--S 379
Query: 182 DLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKIS 239
SP +K + E K+ S+ + ++ S + + P RK +S
Sbjct: 380 TSSPAKKQKVDHVESSKEKSKKQPSKPQAKGSKEKGKATKKGKAKAEPTRKEMLEVVS 437
>At5g53440.1 68418.m06641 expressed protein
Length = 1181
Score = 33.9 bits (74), Expect = 0.33
Identities = 22/116 (18%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
Query: 127 YSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPP 186
++ +DDK S+ + KS+K+ D + + G ++ R D D
Sbjct: 88 WNGKDDDKGESSKKTKVSSEKSRKRDEGDGEETKKSSGKSDGKHRESSRRESKDVDKEKD 147
Query: 187 RKHEGQRAEKLKKPSRWDNEQDKSPKS-LRANNHRRSKSSDLSPPRKTQTNKISSG 241
RK++ +++K + S K+ +A +H RS ++ ++++ + G
Sbjct: 148 RKYKEGKSDKFYDGDDHHKSKAGSDKTESKAQDHARSPGTENYTEKRSRRKRDDHG 203
Score = 32.7 bits (71), Expect = 0.77
Identities = 38/185 (20%), Positives = 69/185 (37%), Gaps = 12/185 (6%)
Query: 76 EHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENEL---VFGKMYSDSED 132
+H ++++ S K + + + K+ +K E V G+ Y +
Sbjct: 11 KHKDATKEYSDSEKETSLKEKKSKEESSTTVRVSKESGSGDKRKEYYDSVNGEYYEEYTS 70
Query: 133 DKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTT-EYDSDLSPPRKHEG 191
+ SG + S + + D D + V S KR + + K +G
Sbjct: 71 SSSKRRKGK-SGESGSDRWNGKDDDKGESSKKTKVSSEKSRKRDEGDGEETKKSSGKSDG 129
Query: 192 QRAEKLKKPSR-WDNEQD------KSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEM 244
+ E ++ S+ D E+D KS K ++H +SK+ K Q + S G E
Sbjct: 130 KHRESSRRESKDVDKEKDRKYKEGKSDKFYDGDDHHKSKAGSDKTESKAQDHARSPGTEN 189
Query: 245 KIQKR 249
+KR
Sbjct: 190 YTEKR 194
>At5g25060.1 68418.m02970 RNA recognition motif (RRM)-containing
protein KIAA0332 - Homo sapiens, EMBL:AB002330
Length = 946
Score = 33.9 bits (74), Expect = 0.33
Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 2/119 (1%)
Query: 110 KDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKR 169
K+ +E E++ E+ ++ D PN + + K+K + S R K
Sbjct: 819 KNPEEIERKVEINRKRLEVDYGLSGPNEGNRNQKSIIERKEKREDSQESSKKRHRGENKS 878
Query: 170 NNSPKR--TTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSD 226
+ P++ T E D DL R E R + D ++ + S +++ RSK D
Sbjct: 879 QSPPRKSSTRERDHDLGRDRDRERHRDRDRQHDLNRDRDRREKSSSHDRDDNDRSKERD 937
Score = 33.1 bits (72), Expect = 0.58
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Query: 106 QEIKKDVKETEKENELVFGKMYSDSEDDKPNVS-----EASPSGRAKSKKKHNSDSDF-S 159
+EI++ V+ K E+ +G + +E ++ S E + SKK+H ++ S
Sbjct: 822 EEIERKVEINRKRLEVDYG-LSGPNEGNRNQKSIIERKEKREDSQESSKKRHRGENKSQS 880
Query: 160 PPRRGNPVKRNNSPKRTTEYDSDLSPPRKH----EGQRAEKLKKPSRWDNEQDK 209
PPR+ + +R++ R + + R+H + R EK R DN++ K
Sbjct: 881 PPRKSSTRERDHDLGRDRDRERHRDRDRQHDLNRDRDRREKSSSHDRDDNDRSK 934
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 33.5 bits (73), Expect = 0.44
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 14/141 (9%)
Query: 60 EGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKEN 119
+G+D+ +G+ + E K++ + + + K + S+ + ++ ++E E+
Sbjct: 56 DGNDSGSESGL-ESGSESEKEERRRSRKDRGKRKSDRKSSRSRRRRRDYSSSSSDSESES 114
Query: 120 ELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEY 179
E YSDSE+ + SE R K K+K + + RR +R K+ +
Sbjct: 115 E----SEYSDSEESE---SE-DERRRRKRKRKEREEEEKERKRR----RREKDKKKRNKS 162
Query: 180 DSDLSPPRKHEGQR-AEKLKK 199
D D RK + ++ +EK+KK
Sbjct: 163 DKDGDKKRKEKKKKKSEKVKK 183
>At4g31490.1 68417.m04473 coatomer beta subunit, putative /
beta-coat protein, putative / beta-COP, putative similar
to Coatomer beta subunit (Beta-coat protein) (Beta-COP)
from {Rattus norvegicus} SP|P23514, {Mus musculus}
SP|Q9JIF7, {Homo sapiens} SP|P53618; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 948
Score = 33.1 bits (72), Expect = 0.58
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 522 KGLKQLEAQEERLQDFMHEASKPLARHRDDADSENRLKQIERAGDPM 568
KG+ QLE E+++QD + A+ + +DA+ NR+ Q+ DP+
Sbjct: 682 KGMSQLEL-EDQVQDDLKRATGEFTKDENDANKLNRILQLTGFSDPV 727
>At4g31480.1 68417.m04472 coatomer beta subunit, putative /
beta-coat protein, putative / beta-COP, putative similar
to Coatomer beta subunit (Beta-coat protein) (Beta-COP)
from {Rattus norvegicus} SP|P23514, {Mus musculus}
SP|Q9JIF7, {Homo sapiens} SP|P53618; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 971
Score = 33.1 bits (72), Expect = 0.58
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 522 KGLKQLEAQEERLQDFMHEASKPLARHRDDADSENRLKQIERAGDPM 568
KG+ QLE E+++QD + A+ + +DA+ NR+ Q+ DP+
Sbjct: 705 KGMSQLEL-EDQVQDDLKRATGEFTKDENDANKLNRILQLTGFSDPV 750
>At3g09710.1 68416.m01150 calmodulin-binding family protein low
similarity to SF16 protein [Helianthus annuus]
GI:560150; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 454
Score = 33.1 bits (72), Expect = 0.58
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 4/131 (3%)
Query: 109 KKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVK 168
+K+ T +N V +S+ + +++S + S K N+ S S R NP K
Sbjct: 276 EKEQNTTNNDNSSVKNSTNRNSQGGE--TAKSSNRNKLNSSTKPNTPSASSTATR-NPRK 332
Query: 169 RNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLS 228
+ P SD + E R + +PS D+E S + R++N + S
Sbjct: 333 KRPIPSSIKSKSSD-DEAKSSERNRRPSIARPSVSDDETLSSSTARRSSNLIPTTKSARG 391
Query: 229 PPRKTQTNKIS 239
P+ +++++
Sbjct: 392 KPKSQTSSRVA 402
>At2g44200.1 68415.m05500 expressed protein
Length = 493
Score = 33.1 bits (72), Expect = 0.58
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 145 RAKSKKKHNSDSDFSPPRRG---NPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLK--K 199
R K+ SD D P RR N RN SPK E ++ S ++ + ++AE L K
Sbjct: 327 RESQDKRRRSDIDDEPKRRDARPNEKYRNRSPKGGVERENLKSYGQEDKKRKAEDLDSGK 386
Query: 200 PSRWDNEQDKSPKSL 214
P+ + N + K L
Sbjct: 387 PNEYQNRRRKGGSKL 401
Score = 31.5 bits (68), Expect = 1.8
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 11/129 (8%)
Query: 109 KKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSD-----SDFSPPRR 163
KK +++ K + + SDSE+D + S K+ H+ SD +
Sbjct: 182 KKHKRKSGKHQKQSSSRQRSDSEEDSGEENNGRKSHHQKTSGTHDRHYERPRSDLEDESK 241
Query: 164 GNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSK 223
G + + KR +E D +H+ ++ S D D+S + +NH +
Sbjct: 242 GRESRDRHYEKRRSELDDGHKRRERHD---THYERRRSEMD---DESKRRESRDNHYERR 295
Query: 224 SSDLSPPRK 232
SDL K
Sbjct: 296 RSDLDDESK 304
>At2g21380.1 68415.m02544 kinesin motor protein-related
Length = 1058
Score = 33.1 bits (72), Expect = 0.58
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 60 EGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQ--DDGFNSKLQIQEIKKDVKETEK 117
+G P ++ E+ + + + F TS+ ++V+Q +D NSK QIQ ++ D++E ++
Sbjct: 581 QGVMTPDEMDLLVEQVKMLAGEIAFGTSTLKRLVDQSMNDPENSKTQIQNLENDIQEKQR 640
Query: 118 ENELVFGKMYSDSEDDKPNVS 138
+ + + ++ E N S
Sbjct: 641 QMKSLEQRITESGEASIANAS 661
>At1g70100.3 68414.m08067 expressed protein
Length = 504
Score = 33.1 bits (72), Expect = 0.58
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 186 PRKHEGQRAEKLKKPSRWDNEQD---KSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQ 242
P K G+ +E L K ++ + + + K+ K++R N+ R S S+ +K T+K+ SG+
Sbjct: 212 PSKDTGEMSETLMKETKKEKDHNPIKKTDKNVRTNHMRASPKSN-QVTKKPVTSKVVSGR 270
Query: 243 EMKIQKRYDVT 253
+ + K +T
Sbjct: 271 KTQPSKEKSMT 281
>At1g70100.2 68414.m08066 expressed protein
Length = 482
Score = 33.1 bits (72), Expect = 0.58
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 186 PRKHEGQRAEKLKKPSRWDNEQD---KSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQ 242
P K G+ +E L K ++ + + + K+ K++R N+ R S S+ +K T+K+ SG+
Sbjct: 212 PSKDTGEMSETLMKETKKEKDHNPIKKTDKNVRTNHMRASPKSN-QVTKKPVTSKVVSGR 270
Query: 243 EMKIQKRYDVT 253
+ + K +T
Sbjct: 271 KTQPSKEKSMT 281
>At1g70100.1 68414.m08065 expressed protein
Length = 467
Score = 33.1 bits (72), Expect = 0.58
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 186 PRKHEGQRAEKLKKPSRWDNEQD---KSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQ 242
P K G+ +E L K ++ + + + K+ K++R N+ R S S+ +K T+K+ SG+
Sbjct: 212 PSKDTGEMSETLMKETKKEKDHNPIKKTDKNVRTNHMRASPKSN-QVTKKPVTSKVVSGR 270
Query: 243 EMKIQKRYDVT 253
+ + K +T
Sbjct: 271 KTQPSKEKSMT 281
>At1g32120.1 68414.m03952 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 1206
Score = 33.1 bits (72), Expect = 0.58
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 6/136 (4%)
Query: 123 FGKMYSDSEDDKPN----VSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTE 178
F SDS KPN V++ + + ++ S PP++ N +K +NS
Sbjct: 673 FSPKQSDSPVKKPNMLPRVADLAKQSSSSPWVPRHTSSVAHPPKQENYIKHHNSTSSRVS 732
Query: 179 YDSDLSPP-RKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNK 237
+S+ +P + +R + P ++ K+P S R + SS LS + K
Sbjct: 733 KESNRTPSVSSYPLKRKTSQRSPEAINSRGQKNPPSPRVSK-EPYMSSSLSVSSSSTRKK 791
Query: 238 ISSGQEMKIQKRYDVT 253
E + Y+ T
Sbjct: 792 PPRSHEAANSRGYNHT 807
>At1g19990.1 68414.m02504 expressed protein ; expression supported
by MPSS
Length = 251
Score = 33.1 bits (72), Expect = 0.58
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 145 RAKSKKKHNSDSDFSP--PRRGNPVKRNNSPKRTTEYDSDLSPPRKHE--GQRAEKLKKP 200
+ ++++ + S S F+ P GN K + D D + P K G RA+ +KK
Sbjct: 13 KEEAEEDNKSLSSFAKKKPTNGNNAGSKKLKKEENDDDDDDNKPIKSSVSGSRAKPVKKK 72
Query: 201 SRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNK 237
D + +K P S R ++ SK + P ++ + K
Sbjct: 73 EEIDKDDEKKPVSKRNSSVGVSKENK-KPEKEEEVKK 108
>At1g03910.1 68414.m00376 expressed protein low similarity to cactin
[Drosophila melanogaster] GI:7673675; expression
supported by MPSS
Length = 672
Score = 33.1 bits (72), Expect = 0.58
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 162 RRGNPVKRNNSPKRTTEYDS--DLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNH 219
RR + S T++ D DLSPPR ++ ++ R + D S +
Sbjct: 18 RRDESESGSESESYTSDSDGSDDLSPPRSSRRKKGSSSRRTRRRSSSDDSSDSDGGRKSK 77
Query: 220 RRSKSSDLSPPRKTQ 234
+RS S D S + T+
Sbjct: 78 KRSSSKDYSEEKVTE 92
Score = 32.7 bits (71), Expect = 0.77
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 288 DNKQSQLKKYNDTDYGXXXXXXXXXXXXXXXXXPPRKSKRQISESPCRNVPLRKKTNDSD 347
D Q K+ ++++ G PPR S+R+ S R R+ ++D
Sbjct: 10 DRSGRQKKRRDESESGSESESYTSDSDGSDDLSPPRSSRRKKGSSSRRT--RRRSSSDDS 67
Query: 348 SDLSPPRKNIRYAENKSY 365
SD RK+ + + +K Y
Sbjct: 68 SDSDGGRKSKKRSSSKDY 85
Score = 32.3 bits (70), Expect = 1.0
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 323 RKSKRQISESPCRNVPLRKKTNDSDSDLSPPRKNIRYAENKSYRNVSKKPHRRNDTKDSG 382
+K +R SES + ++ SD DLSPPR + R + S R RR + D
Sbjct: 15 QKKRRDESESGSESESYTSDSDGSD-DLSPPRSSRRKKGSSSRRT------RRRSSSDDS 67
Query: 383 SDLSPPRKLKNIDNYRRHYSE 403
SD RK K + + YSE
Sbjct: 68 SDSDGGRKSKKRSS-SKDYSE 87
>At5g27120.1 68418.m03237 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 32.7 bits (71), Expect = 0.77
Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 5/100 (5%)
Query: 128 SDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPR 187
+DS P V + K KKK D + P K+ ++ K+T + P
Sbjct: 439 ADSLLQTPTVDSENGVKEKKDKKKKKKADDEEEAKTEEPSKKKSNKKKT-----EAEPET 493
Query: 188 KHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDL 227
E + EK KK + E + K + ++ K +++
Sbjct: 494 AEEPAKKEKKKKRKHEEEETEMPAKKKEKSEKKKKKKTEV 533
Score = 31.1 bits (67), Expect = 2.3
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Query: 125 KMYSDSEDDKPNVSEASPSGRAKSKKKHN-SDSDFSPPRRGNPVKRNNSPKRTTEYDSDL 183
K D + K E SKKK N ++ P P K+ KR E +
Sbjct: 455 KEKKDKKKKKKADDEEEAKTEEPSKKKSNKKKTEAEPETAEEPAKKEKKKKRKHEEEETE 514
Query: 184 SPPRKHEGQRAEKLKK 199
P +K E +K KK
Sbjct: 515 MPAKKKEKSEKKKKKK 530
>At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 930
Score = 32.7 bits (71), Expect = 0.77
Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 12/151 (7%)
Query: 96 DDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVS-EASPSGRAKSKKKHNS 154
+D + +L +K+ V+E K + L G SE++K E SP R+ +S
Sbjct: 788 EDSSDKRLDRPGLKEKVEE--KTSSLTLG-----SEEEKSRKKREKSPGKRSGGNDLSSS 840
Query: 155 DSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSL 214
+S RR + N + + +SD S H + + R ++ ++K
Sbjct: 841 ESSGDERRRK---RYNKKDRHRNDSESDSSSDY-HSRDKQGSRSRSKRRESSREKRSSHK 896
Query: 215 RANNHRRSKSSDLSPPRKTQTNKISSGQEMK 245
+ + HRR+K S S + K S ++ +
Sbjct: 897 KHSKHRRTKKSSSSRYSSDEEQKESRREKKR 927
>At4g34400.1 68417.m04886 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 389
Score = 32.7 bits (71), Expect = 0.77
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 98 GFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSD 157
G+++ +I E+ +++E E+++ + +D+ K + P GR K K K D
Sbjct: 106 GYDACKEISEVT-ELEEEEEDSVISLSSEDTDT-GAKSEMKNTVPEGRDKGKSKVEVVED 163
Query: 158 FSPPRRGNPVKRNNSPKRTTEYDSDLS------PPRKHEGQRAEKLKKPSRWDNEQDKSP 211
+ V +S + T+ DS+ P + +G++ E++ + S D+E+D+
Sbjct: 164 SDDDEEEDSVYSESSEETETDTDSEFKVAKPTIPKSQKKGKKKEQVVESS--DDEEDEEE 221
Query: 212 KS 213
S
Sbjct: 222 DS 223
>At3g53500.2 68416.m05907 zinc knuckle (CCHC-type) family protein
contains Pfam domain PF00098: Zinc knuckle
Length = 284
Score = 32.7 bits (71), Expect = 0.77
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 149 KKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQD 208
KK S P + +R SP R+ Y S R R EK + ++
Sbjct: 143 KKARQGGSYSRSPVKSRSPRRRRSPSRSRSYSRGRSYSRSRSPVRREKSVE------DRS 196
Query: 209 KSPKSLRANNHRRSKSSDLSPPRK 232
+SPK++ + + + LSP RK
Sbjct: 197 RSPKAMERSVSPKGRDQSLSPDRK 220
>At3g53500.1 68416.m05906 zinc knuckle (CCHC-type) family protein
contains Pfam domain PF00098: Zinc knuckle
Length = 243
Score = 32.7 bits (71), Expect = 0.77
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 149 KKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQD 208
KK S P + +R SP R+ Y S R R EK + ++
Sbjct: 102 KKARQGGSYSRSPVKSRSPRRRRSPSRSRSYSRGRSYSRSRSPVRREKSVE------DRS 155
Query: 209 KSPKSLRANNHRRSKSSDLSPPRK 232
+SPK++ + + + LSP RK
Sbjct: 156 RSPKAMERSVSPKGRDQSLSPDRK 179
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 32.7 bits (71), Expect = 0.77
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 19/144 (13%)
Query: 104 QIQEIKKDVKETEKEN--ELVFGKMYSDSEDDKPNVSEASPS------GRAKSKKKHNSD 155
+ EI K +E +K+N + K+ S E + N +A PS GR +K +
Sbjct: 136 EANEIMKK-REGDKKNIEHDILRKIDSGVEHKETNGMDAKPSRDRPEDGRRADEKNGVKE 194
Query: 156 S--DFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKS 213
D PPRRG+ + R+ S + + G+R + S ++ SP+
Sbjct: 195 RRRDLIPPRRGDASRSPLRGSRSRSISKTNSGSKSYSGERKSRSTSQS---SDASISPRK 251
Query: 214 LR-ANNHRRSKS----SDLSPPRK 232
R +N+ RRS+S LSP R+
Sbjct: 252 RRLSNSRRRSRSRSVRRSLSPRRR 275
Score = 29.5 bits (63), Expect = 7.2
Identities = 39/173 (22%), Positives = 69/173 (39%), Gaps = 6/173 (3%)
Query: 74 RPEHIKKQEQFTTS-SKWKIVNQDDGFN-SKLQIQEIK-KDVKETEKENELVFGKMYSDS 130
R EH K+QE+ + S+ + V++ G S ++ E + + V K++E V + D+
Sbjct: 683 RVEHYKEQERKSDKLSEKRSVHRHHGSQMSPVENSEGRSRPVSSKVKDSEQVEKE---DN 739
Query: 131 EDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHE 190
D N+S S K N + R N S + + RK E
Sbjct: 740 SDLDANLSCDSKDTIRHQIKDKNRRKNKRSSREEVSSDDNGSSDSDVDDRKEAKRRRKEE 799
Query: 191 GQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQE 243
+ ++ KK R + + + + H++ + SD S KI G+E
Sbjct: 800 KKTRKEEKKRRREERHRKREERRGGKEKHKKQELSDTSEGEVEARPKIKKGEE 852
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 32.7 bits (71), Expect = 0.77
Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 514 DEKYKRWSKGLKQLEAQEERLQDFMHEASKPLARHRDDADSENRLKQIERAGDPMLRYIQ 573
+ K + + ++ EA++ R ++ E + +A+ R++ +++ER R Q
Sbjct: 498 EAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVERKR----REEQ 553
Query: 574 DRKR--EEGNLPPERPKYKGNFPPNRFNLRPGYRWDGVDRSNGYEKKFFEQQSKRKAQEE 631
+RKR EE E K + R R + V+R E++ ++ K +E+
Sbjct: 554 ERKRREEEARKREEERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRREQ 613
Query: 632 EAYKWSTEDL 641
E K E++
Sbjct: 614 ERQKKEREEM 623
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 32.7 bits (71), Expect = 0.77
Identities = 39/200 (19%), Positives = 76/200 (38%), Gaps = 6/200 (3%)
Query: 51 EGDELD-VYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIK 109
E D+LD + E + P PE K Q Q + + + +G ++ K
Sbjct: 250 EEDDLDKLLAELGETPAAERPASSTPEVEKVQAQPGPVAPVENAGEKEGEKETVETAAAK 309
Query: 110 KDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKR 169
K K+ EK+ E + S + K E S + + KKK D+ + P
Sbjct: 310 KKKKKKEKDKEKKAAAAATSSVEAKEEKQEESVTEPLQPKKK---DAKGKAAEKKIPKHV 366
Query: 170 NNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSP 229
+ +K E ++ K ++ R +++ ++ A R+ K +
Sbjct: 367 REMQEALARRQEAEERKKKEEEEKLRKEEEERR--RQEELEAQAEEAKRKRKEKEKEKLL 424
Query: 230 PRKTQTNKISSGQEMKIQKR 249
+K + +++ Q+ + QKR
Sbjct: 425 RKKLEGKLLTAKQKTEAQKR 444
>At1g75150.1 68414.m08729 expressed protein ; expression supported
by MPSS
Length = 753
Score = 32.7 bits (71), Expect = 0.77
Identities = 22/116 (18%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 53 DELDVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDV 112
DE D DE DD + + + + K + KW + Q D ++ +Q++K+ V
Sbjct: 429 DEDDDEDEDDDDLRDMIVSQFKEDPTDKDRRNELHQKW--LEQQDAAGTEKLLQKLKRGV 486
Query: 113 KETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVK 168
+ E D ++++P ++ + ++ + + D D P N ++
Sbjct: 487 QHDETLLSEDEDDDVDDDDEERPEGADGEEVQKPEANEDEDEDEDEEDPSHANSMR 542
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 32.7 bits (71), Expect = 0.77
Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 12/154 (7%)
Query: 76 EHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEI-KKDVKETEKENELVFGKMYSDSEDDK 134
+HI K SSK+ + +Q+ + + + DV ET K N S +
Sbjct: 349 DHIAKDCVGGPSSKFIVKDQNRQHGGGEGYEMVFEGDVHETPKHN--------SHERERS 400
Query: 135 PNVSEASPSGRAKSKKKHNSDSDFSPPR--RGNPVKRNNSPKRTTEYDSDLSPPRKHEGQ 192
+ SP G + K++H + D + R + + + E +S R+ +
Sbjct: 401 EKIQRRSPHGNGEGKRQHRDERDDGRRQHDREDARELERKHRERKERESREDEDRRRRRR 460
Query: 193 RAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSD 226
R E K SR + ++D +S R RR + D
Sbjct: 461 REESRDKESRRERDED-DHRSHRDYKERRRERDD 493
>At3g20550.1 68416.m02601 forkhead-associated domain-containing
protein / FHA domain-containing protein weak similarity
to SP|Q28147 Nuclear inhibitor of protein phosphatase-1
(NIPP-1) (Protein phosphatase 1, regulatory inhibitor
subunit 8) {Bos taurus}; contains Pfam profile PF00498:
FHA domain
Length = 314
Score = 32.3 bits (70), Expect = 1.0
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 9/122 (7%)
Query: 138 SEASPSGRAKSKKKHNSDSDFSPPRR----GNPVKRNNSPKRTTEYDSDLSPPRKHEGQR 193
S SPS R K ++ + + R G ++ NS +R + D RK EG+R
Sbjct: 4 SSRSPSPRTKRLRRARGEKEIGRSREREDDGREREKRNSRERDRDIGRDRDRERKGEGER 63
Query: 194 ----AEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMKIQKR 249
+K ++ R D E+ + ++ R SP ++ + S E I R
Sbjct: 64 DREVGDKRRRSGREDTEKRRRTRTDDERYSRGRHERSTSPSDRSHRSSRRS-PERAIASR 122
Query: 250 YD 251
+D
Sbjct: 123 HD 124
>At3g06480.1 68416.m00750 DEAD box RNA helicase, putative similar to
RNA helicase DRH1 [Arabidopsis thaliana] GI:3149952;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain, PF00397:
WW domain
Length = 1088
Score = 32.3 bits (70), Expect = 1.0
Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Query: 162 RRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLR-ANNHR 220
RRG R+ R S S R G + + W + +SP+ R H
Sbjct: 950 RRGRSRSRSPDLVRPRRRSSSYSRSRSRSGSYSRSRSRSRSWSRSRSRSPRHSRDRGGHN 1009
Query: 221 RSKSSDLSP 229
RS+S SP
Sbjct: 1010 RSRSYSRSP 1018
>At1g77840.1 68414.m09070 eukaryotic translation initiation factor
5, putative / eIF-5, putative similar to SP|P55876
Eukaryotic translation initiation factor 5 (eIF-5) {Zea
mays}; contains Pfam profiles PF02020:
eIF4-gamma/eIF5/eIF2-epsilon, PF01873: Domain found in
IF2B/IF5
Length = 437
Score = 32.3 bits (70), Expect = 1.0
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 10/124 (8%)
Query: 104 QIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGR-AKSKKKHNSDSDFSPPR 162
++ + KK +++ EKE L G++ + + +A +G+ +K+ K H+SD D SP
Sbjct: 151 KVSKDKKAMRKAEKER-LKEGELADEEQRKLKAKKKALSNGKDSKTSKNHSSDEDISPKH 209
Query: 163 RGN--PVKRNNSPKRTTEYDSDLSPPRKHE------GQRAEKLKKPSRWDNEQDKSPKSL 214
N V + E+ +D S + + ++ S + E+ K+PKS
Sbjct: 210 DENALEVDEDEDDDDGVEWQTDTSREAAEKRMMEQLSAKTAEMVMLSAMEVEEKKAPKSK 269
Query: 215 RANN 218
N
Sbjct: 270 SNGN 273
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 32.3 bits (70), Expect = 1.0
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 6/138 (4%)
Query: 113 KETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNS 172
KE EKE E + +S DK S S SK+K S P ++ +S
Sbjct: 764 KEKEKEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSPVRSRRKRSS 823
Query: 173 PKRTTEYDSDLSPPRKHEGQRAEKLKKP--SRWDNEQDKSPKSLRANNHRRSKSSDLSPP 230
P +++ SD S RK +R + P SR + +SP S + + H+ + S
Sbjct: 824 P--SSDESSDDS-KRKSSSKRKNRSPSPGKSRRRHVSSRSPHS-KHSQHKNTLYSSHDKS 879
Query: 231 RKTQTNKISSGQEMKIQK 248
R ++ S + +K
Sbjct: 880 RSKRSRSRSRSPHRRHRK 897
>At1g29170.1 68414.m03569 expressed protein ; expression supported
by MPSS
Length = 1016
Score = 32.3 bits (70), Expect = 1.0
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 164 GNPVKRNNSPKRTTEYDSDLSPPRK--HEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRR 221
G+ +KR + P S+LS K + ++ K+KK +D S + AN + R
Sbjct: 149 GSCLKRYSDPTYFRRASSNLSQGNKKFQKDKKHCKMKKKKTSSRSRDMSRLASLANQNAR 208
Query: 222 SKSSDLSPPRKTQTNKISSGQEMKIQKRYD 251
+ S +T + K +S +M +KRYD
Sbjct: 209 KTFASFSFSGQTSSTKTTSTSDM--EKRYD 236
Score = 29.1 bits (62), Expect = 9.5
Identities = 35/194 (18%), Positives = 78/194 (40%), Gaps = 4/194 (2%)
Query: 52 GDELDVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKD 111
G + D E +A V +DE+P + + SK N++D S L+ + +
Sbjct: 331 GLQTDEASEMVEANSVVDTLDEKPSYGEGIGGVDFHSK---DNENDKSESGLRKRAGIDE 387
Query: 112 VKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNN 171
V+E + E+V S+ E + +S+ ++N S V
Sbjct: 388 VREIKNGREIVGEPRDSEQETESEGECFVDALNTIESESENNQGLQTSQVSSSCGVADER 447
Query: 172 SPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPR 231
K E +++ + + R+ + + NE++ S +++ H+++ + S
Sbjct: 448 LEKSVCEQETEQNSYSVEDSCRSMDGLMANSFKNEENASSENVSVEMHQQNLQAG-SDIN 506
Query: 232 KTQTNKISSGQEMK 245
+ Q N + + ++M+
Sbjct: 507 RLQKNDLCANKDMR 520
>At1g14770.2 68414.m01766 expressed protein
Length = 429
Score = 32.3 bits (70), Expect = 1.0
Identities = 36/151 (23%), Positives = 61/151 (40%), Gaps = 16/151 (10%)
Query: 71 IDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDS 130
+DE+ HI ++ T I N+ + + + Q+ I ++ EK+ + D
Sbjct: 190 VDEQQLHIGNAKEPTDEQHVHIGNEKESIDEQ-QVH-IGLELNRNEKDKVIAI-----DD 242
Query: 131 EDDKPNVSEASP----SGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPP 186
ED+ + +E + +S + SD FSP GN + + T S SP
Sbjct: 243 EDEPMHTNEKGEVVVINDDTESDQGTTSDGTFSPRHNGN-----TTDETTFSPSSRRSPE 297
Query: 187 RKHEGQRAEKLKKPSRWDNEQDKSPKSLRAN 217
H + S D+E DK P S++ N
Sbjct: 298 DAHVKCTKDGTWLISGSDDESDKDPPSIKKN 328
>At1g14770.1 68414.m01765 expressed protein
Length = 429
Score = 32.3 bits (70), Expect = 1.0
Identities = 36/151 (23%), Positives = 61/151 (40%), Gaps = 16/151 (10%)
Query: 71 IDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDS 130
+DE+ HI ++ T I N+ + + + Q+ I ++ EK+ + D
Sbjct: 190 VDEQQLHIGNAKEPTDEQHVHIGNEKESIDEQ-QVH-IGLELNRNEKDKVIAI-----DD 242
Query: 131 EDDKPNVSEASP----SGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPP 186
ED+ + +E + +S + SD FSP GN + + T S SP
Sbjct: 243 EDEPMHTNEKGEVVVINDDTESDQGTTSDGTFSPRHNGN-----TTDETTFSPSSRRSPE 297
Query: 187 RKHEGQRAEKLKKPSRWDNEQDKSPKSLRAN 217
H + S D+E DK P S++ N
Sbjct: 298 DAHVKCTKDGTWLISGSDDESDKDPPSIKKN 328
>At5g47430.1 68418.m05844 expressed protein
Length = 879
Score = 31.9 bits (69), Expect = 1.3
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
Query: 112 VKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNN 171
+++ E E GKM+ D E+ + ++ + S A S + S PP +R
Sbjct: 611 LRKRENERRPEGGKMFRDGENSRMMMNNGT-SASASSINPNKSRQAPPPPIHDYDRRRRP 669
Query: 172 SPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPR 231
+ + E+ P RK+ + +K R+ +E+D+ R+ + + D + R
Sbjct: 670 EKRLSPEHP----PTRKNISPSRDSKRKSERYPDERDRQRDRERSRHQDVDREHDRTRDR 725
Query: 232 KTQ 234
+ +
Sbjct: 726 RDE 728
Score = 29.9 bits (64), Expect = 5.4
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 563 RAGDPMLRYIQDRKREEGNLPPERPKYKGNFPPNRFNLRPGYRW-DGVDRSNGYEK 617
+A P + R+R E L PE P + N P+R + R R+ D DR E+
Sbjct: 654 QAPPPPIHDYDRRRRPEKRLSPEHPPTRKNISPSRDSKRKSERYPDERDRQRDRER 709
>At4g19190.1 68417.m02832 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 595
Score = 31.9 bits (69), Expect = 1.3
Identities = 28/151 (18%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Query: 72 DERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSE 131
D+ H ++++Q ++ +Q ++ +IQ ++K+ + E+ + Y D E
Sbjct: 452 DDYKSHHRERKQVHSNDPVSEKSQKQHYSESGKIQRVEKEHRYDERRHR------YVDME 505
Query: 132 DDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTE-YDSDLSPPRKHE 190
+ N SE P + +KH+ + + + ++ P+ ++ Y S E
Sbjct: 506 SENRNRSEKKPRYDDRDSEKHHRS---VKGKEKHVYEASDDPEEFSDRYRSTKKTESDSE 562
Query: 191 GQRAEKLKKPSRWDNEQDKSPKSLRANNHRR 221
R + KK E++ + R + +RR
Sbjct: 563 SNRRSRKKKHELSSEEEEGESRKHRYSTNRR 593
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 31.9 bits (69), Expect = 1.3
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 142 PSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPS 201
PS R+ S++ SPPRR +P R N +R+T D R +G R++ + S
Sbjct: 457 PSNRSYSERSPRGRFR-SPPRRRSP-PRYNRRRRSTSRSPDGYRRRLRDGSRSQSPRHRS 514
Query: 202 RWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKIS 239
R + + + P S + + S + R + +S
Sbjct: 515 RSQSPRKRQPISQDLKSRLGPQRSPIRGGRTSPAESLS 552
>At3g56660.1 68416.m06301 bZIP transcription factor family protein
similar to AtbZIP transcription factor GI:17065880 from
[Arabidopsis thaliana]; contains Pfam profile: PF00170
bZIP transcription factor
Length = 620
Score = 31.9 bits (69), Expect = 1.3
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 130 SEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKH 189
+ED + N + S + ++ +DSDFS + +S KR TE + D S +
Sbjct: 94 NEDTEKNTNGVLISTSSCYNRESPTDSDFSGTSQSLSFSGQDSAKRKTEIEEDSSDESRR 153
Query: 190 EGQR--AEKLKKPSRWDNEQDKSPKSLR 215
G+ A +K D+E+ K+ + +R
Sbjct: 154 LGKDGFASVIKVGGEEDDEKKKNVRLVR 181
>At2g01100.3 68415.m00018 expressed protein
Length = 247
Score = 31.9 bits (69), Expect = 1.3
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 142 PSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPS 201
P + ++ + +S+SD S R + +N +R DSD S RK + R +K + S
Sbjct: 51 PKRKQRAASESSSESDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLS 110
Query: 202 RWDNE----QDKSPKSLR--ANNHRRSK 223
D+ + S LR +HRR K
Sbjct: 111 PSDDSTGDYESGSEDELRMKIKHHRRHK 138
>At2g01100.2 68415.m00017 expressed protein
Length = 247
Score = 31.9 bits (69), Expect = 1.3
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 142 PSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPS 201
P + ++ + +S+SD S R + +N +R DSD S RK + R +K + S
Sbjct: 51 PKRKQRAASESSSESDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLS 110
Query: 202 RWDNE----QDKSPKSLR--ANNHRRSK 223
D+ + S LR +HRR K
Sbjct: 111 PSDDSTGDYESGSEDELRMKIKHHRRHK 138
>At2g01100.1 68415.m00016 expressed protein
Length = 247
Score = 31.9 bits (69), Expect = 1.3
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 142 PSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPS 201
P + ++ + +S+SD S R + +N +R DSD S RK + R +K + S
Sbjct: 51 PKRKQRAASESSSESDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKRRSLS 110
Query: 202 RWDNE----QDKSPKSLR--ANNHRRSK 223
D+ + S LR +HRR K
Sbjct: 111 PSDDSTGDYESGSEDELRMKIKHHRRHK 138
>At5g55670.1 68418.m06941 RNA recognition motif (RRM)-containing
protein
Length = 710
Score = 31.5 bits (68), Expect = 1.8
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 533 RLQDFMHEASKPLARHRDDADS--ENRLKQIERAGDPMLRYIQD--RKREEGNLPPERPK 588
R +D H P RHRDD D+ E + + + +++D R+RE ER +
Sbjct: 594 REKDVGHGYDMPERRHRDDRDTGREREREHHHKDRERSREHVRDRERERERDRHREERER 653
Query: 589 YKGNF-PPNRFNLRPGYRWDGVDRSNGYEKKFFEQQSKRKAQEEE 632
Y G+ +R W+ S G+ K ++ +++ +
Sbjct: 654 YGGDHRTRHRDEPEHDEEWNRGRSSRGHNKSRLSREDNHRSKSRD 698
>At5g13340.1 68418.m01535 expressed protein
Length = 242
Score = 31.5 bits (68), Expect = 1.8
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Query: 169 RNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLS 228
R+ SP Y SP +R + + S + + KS +S H+R +SS LS
Sbjct: 7 RSRSPSHRRRYSR--SPVTHRSSRRTRRDRSRSPYTSRHKKS-RSPAPRQHQRDRSSSLS 63
Query: 229 PPRKTQTNKISSGQEMKIQKRYD 251
P ++ QE K + +++
Sbjct: 64 PSEHRIAIEVKKEQEDKARLQHE 86
>At4g28990.1 68417.m04143 RNA-binding protein-related contains weak
similarity to Swiss-Prot:Q01844 RNA-binding protein EWS
(EWS oncogene)(Ewing sarcoma breakpoint region 1
protein) [Homo sapiens]
Length = 347
Score = 31.5 bits (68), Expect = 1.8
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
Query: 129 DSEDDKPNVSEASPSGRAKSKKKHNSDSDFS--PPRRGNPVKRNNSPKRTTEYDSDLSPP 186
D+ + S +SP R KH SD + S PPR R +P R +Y SPP
Sbjct: 61 DNGGHRTRASSSSPGRRGYEDHKHGSDLNHSGVPPRGRELSSRREAPGRHRDY----SPP 116
Query: 187 RKHEGQRAEKLKK 199
G A ++
Sbjct: 117 LARGGAGARPYRR 129
>At4g07520.1 68417.m01174 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 734
Score = 31.5 bits (68), Expect = 1.8
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 51 EGDELDVYDEGDDA-PQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIK 109
E +E + +E DD P + ++E PE +K+ + S+ DD +Q Q ++
Sbjct: 54 EPEEEKISEEVDDEEPMQSQGMEENPEEEEKEGEEEEESE----EGDDV--EPMQSQGME 107
Query: 110 KDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSD 155
++ KE EKE E + D E + E +P K +++ N +
Sbjct: 108 ENPKEEEKEGEEEESEEIDDDEPMPSHGMEENPQEEEKEREEENPE 153
>At3g25590.1 68416.m03186 expressed protein
Length = 423
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 109 KKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKS----KKKHNSDSDFSPPRRG 164
K + ET EN +S+SE + + EA S +++ ++ + S+++++ R
Sbjct: 255 KSNFSETTTENRK---SNFSESEPPRRSGFEARKSNFSETEYPTRRSNFSETEYNTRRGN 311
Query: 165 NPVKRNNSPKRTTEYDS 181
NP N P+R++ Y++
Sbjct: 312 NPATAENHPRRSSNYEA 328
>At3g17010.1 68416.m02172 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 302
Score = 31.5 bits (68), Expect = 1.8
Identities = 18/86 (20%), Positives = 40/86 (46%)
Query: 70 IIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSD 129
I ++ ++K +F T + +++G NS + +++ ++ + + LV K D
Sbjct: 112 IYEQNGLEMRKPRKFQTMGPSSGIKKEEGENSLIDVKKEEESDESPGRAEFLVRKKKTED 171
Query: 130 SEDDKPNVSEASPSGRAKSKKKHNSD 155
S+ K ++ ++KSK K D
Sbjct: 172 SKSSKKKMTRNKVKKKSKSKSKQVLD 197
>At2g21560.1 68415.m02566 expressed protein contains weak similarity
to reticulocyte-binding protein 2 homolog A [Plasmodium
falciparum] gi|9754767|gb|AAF98066
Length = 274
Score = 31.5 bits (68), Expect = 1.8
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 112 VKETEK-ENELVFGKMYSDSEDDKPNVSEAS-PSGRAKSKKKHNSDSDFSPPRRGNPVKR 169
V+E+ + E L + + + + +V++ S RAK + S P N K+
Sbjct: 106 VRESSRGERRLHTDVICREKQSEVESVAKQSIEENRAKQSIEDKRQSRAKPSMSENRAKQ 165
Query: 170 NNSPKRTTEYDSDLSPPRKHEGQRAEK----LKKPSRWDNEQDKSP-KSL---RANNHRR 221
+ KR S++S R+ G +EK +KK + + SP KS R+ NH
Sbjct: 166 STEEKREKLKKSEISG-RQSSGDESEKKDITVKKQRQIVAQNQDSPMKSYERSRSENHEG 224
Query: 222 SKSSDLSPPRKTQTNKISSGQEMKIQKRYDVTS 254
SK S ++++T + + + RY + S
Sbjct: 225 SKKSSCVQLKRSETERPADRIVSDDELRYKIES 257
>At1g18950.1 68414.m02358 aminoacyl-tRNA synthetase family contains
aminoacyl-transfer RNA synthetases class-II signature 1,
PROSITE:PS00179
Length = 766
Score = 31.5 bits (68), Expect = 1.8
Identities = 41/192 (21%), Positives = 77/192 (40%), Gaps = 11/192 (5%)
Query: 56 DVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKET 115
+V + DD + DE +KQ++ ++ S+ D+ + E +++ +E
Sbjct: 528 EVEFQSDDDIYGEAVYDEEYLKKRKQKKLSSGSEGDEEKGDEEYKWDEDNAEYEEEEEEE 587
Query: 116 EKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKR 175
E+E+ L S+ + D+P ++ P K + + N DF P R + ++
Sbjct: 588 EEEDSL----SASEEDSDEPRRAKKMPRRETKLRSRSN---DFRPGLRRSKRATRIDYQQ 640
Query: 176 TTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQD---KSPKSLRANNHRRSKSSDLSPPRK 232
DSD + +R + +PS D S S N +KS + PR
Sbjct: 641 YEFSDSDKEATGLAKRKRFVEPDEPSDETGNGDFTMGSQDSEENANDPETKSGEEEEPRD 700
Query: 233 TQTN-KISSGQE 243
N ++G+E
Sbjct: 701 VNDNADTTNGKE 712
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 31.1 bits (67), Expect = 2.3
Identities = 24/139 (17%), Positives = 61/139 (43%), Gaps = 5/139 (3%)
Query: 109 KKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVK 168
K+DVK E ++ E+D+ EA RAK ++++ + ++ K
Sbjct: 1514 KRDVKVKALEAAEASKRIAEQKENDRKLKKEAMKLERAKQEQENLKKQEIEKKKKEEDRK 1573
Query: 169 RNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLS 228
+ + + ++ +K E ++ ++ + R ++++ K L+ +R + +D
Sbjct: 1574 KKEA---EMAWKQEMEKKKKEEERKRKEFEMADR-KRQREEEDKRLK-EAKKRQRIADFQ 1628
Query: 229 PPRKTQTNKISSGQEMKIQ 247
++ K+ + +E+K Q
Sbjct: 1629 RQQREADEKLQAEKELKRQ 1647
>At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 275
Score = 31.1 bits (67), Expect = 2.3
Identities = 29/125 (23%), Positives = 44/125 (35%), Gaps = 5/125 (4%)
Query: 97 DGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDS 156
D N K ++++ K K + SDSE SG + S+ +SDS
Sbjct: 156 DATNGKAEVEKRSKKSKRKHRSKS----DSESDSEASVFETDSDGSSGESSSEYSSSSDS 211
Query: 157 DFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRA 216
+ RR K K+ E S E +E ++ + KS R
Sbjct: 212 EDERRRRRKAKKSKKKQKQRKERRRRYS-SSSSESSESESASDSDSDEDRSRRKKKSKRH 270
Query: 217 NNHRR 221
+N RR
Sbjct: 271 SNKRR 275
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 31.1 bits (67), Expect = 2.3
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 133 DKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNN-SPKRTTEYDSDLSPPRKHEG 191
D+P V P +S H S + P+ GN K +PK++ S S K EG
Sbjct: 117 DRPAVPREKPVTALRSSSFHGSRN---VPKGGNTAKSPPVAPKKSGLNSSSTSSKSKKEG 173
Query: 192 QRAEKLKKPSRWDNEQDKSPKSLRANNHR 220
++KK S + D + S +H+
Sbjct: 174 SENVRIKKASDKEIALDSASMSSAQEDHQ 202
>At3g05380.1 68416.m00588 myb family transcription factor contains
Pfam profile:PF00249 Myb-like DNA-binding domain
Length = 1055
Score = 31.1 bits (67), Expect = 2.3
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 128 SDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTT-----EYDSD 182
++ D P S S KS+ KH S F + ++ +S K TT E +
Sbjct: 248 TELSDSSPIKSWGKMSRTRKSQSKHCGSSIFEEWMESSRERKLDSDKDTTLLMDMERAGE 307
Query: 183 LSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKS 224
+ PRK + +++K N+ D + ++ A RSKS
Sbjct: 308 MEAPRKGKRVYKKRVKVEEAECNDSDDNGEACSATQGLRSKS 349
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 31.1 bits (67), Expect = 2.3
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 108 IKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPV 167
I+K + E E+++ LVF D+PN ASP R S + + + PR +P
Sbjct: 62 IEKILGEAERDHNLVF----RPPTPDRPNPYSASPPPRPASPRVASPRP--TSPRVASP- 114
Query: 168 KRNNSPKRTTEYDSDLSPPR-KHEGQRAEKLKKPS-RWDNEQDKSPKSLRANNHRRSKSS 225
R SP+ PP + E R+ K PS R D + SPK + + S +S
Sbjct: 115 -RVPSPRAEVPRTLSPKPPSPRAEVPRSLSPKPPSPRADLPRSLSPKPF--DRSKPSSAS 171
Query: 226 DLSPP 230
+PP
Sbjct: 172 ANAPP 176
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 31.1 bits (67), Expect = 2.3
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 108 IKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPV 167
I+K + E E+++ LVF D+PN ASP R S + + + PR +P
Sbjct: 61 IEKILGEAERDHNLVF----RPPTPDRPNPYSASPPPRPASPRVASPRP--TSPRVASP- 113
Query: 168 KRNNSPKRTTEYDSDLSPPR-KHEGQRAEKLKKPS-RWDNEQDKSPKSLRANNHRRSKSS 225
R SP+ PP + E R+ K PS R D + SPK + + S +S
Sbjct: 114 -RVPSPRAEVPRTLSPKPPSPRAEVPRSLSPKPPSPRADLPRSLSPKPF--DRSKPSSAS 170
Query: 226 DLSPP 230
+PP
Sbjct: 171 ANAPP 175
>At1g76780.1 68414.m08935 expressed protein ; expression supported
by MPSS
Length = 1871
Score = 31.1 bits (67), Expect = 2.3
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 9/131 (6%)
Query: 74 RPEHIK---KQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDS 130
RPE I KQE + +S+ + N +DG ++ ++E KD +E E E K+ +D
Sbjct: 791 RPEKITGTIKQELVSLNSQLRQENVEDGDKTQELVEEKIKDCEEEEGSEE---SKIKTD- 846
Query: 131 EDDKPNVSEASPSGRAKSKKKHNSD-SDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKH 189
D V K K++H + ++ G+ K+ ++ +++ RK
Sbjct: 847 -DVVRKVQGIKEEELYKPKREHGTKITELVEETTGDYEKQEEKETAESDIEAECGSLRKV 905
Query: 190 EGQRAEKLKKP 200
+G +L +P
Sbjct: 906 DGIEEHELHEP 916
>At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contains
Pfam profiles PF00270:DEAD/DEAH box helicase and
PF00271: Helicase conserved C-terminal domain;
identical to cDNA RH27 helicase, partial GI:4033334
Length = 633
Score = 30.7 bits (66), Expect = 3.1
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 46 KLRPLEGDELDVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQI 105
KL+ +E +++GD A + +IDE P+ KK++ K + DDG + +
Sbjct: 31 KLKQPAMEEEPDHEDGD-AKENNALIDEEPKKKKKKKNK------KRGDTDDGEDEAVAE 83
Query: 106 QEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSD 157
+E KK +K+N+ + + ++ E+D+ E P K KKK D++
Sbjct: 84 EEPKK----KKKKNKKLQQRGDTNDEEDEVIAEEEEPK---KKKKKQRKDTE 128
>At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin
homolog 1, Arabidopsis thaliana, EMBL:AT08315
[SP|P29402]
Length = 530
Score = 30.7 bits (66), Expect = 3.1
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 120 ELVFG--KMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGN 165
+L+FG K + E KP V+E+S SG KK+ + PRR N
Sbjct: 483 KLIFGGKKAAAPVEKKKPEVAESSKSGDEAEKKEETAAPRKRQPRRDN 530
>At5g61330.1 68418.m07696 rRNA processing protein-related contains
weak similarity to rRNA processing protein EBP2
(EBNA1-binding protein homolog) (Swiss-Prot:P36049)
[Saccharomyces cerevisiae]
Length = 436
Score = 30.7 bits (66), Expect = 3.1
Identities = 30/149 (20%), Positives = 56/149 (37%), Gaps = 10/149 (6%)
Query: 71 IDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEI---KKDVKETEKENELVFGKMY 127
+D E I QE S N+DD ++ E+ + D E+E+++E G
Sbjct: 13 LDSESEDISDQENLKAESD----NEDDQLPDGIEDDEVDSMEDDEGESEEDDE---GDTE 65
Query: 128 SDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPR 187
D E D E + + D + G+ +N + E + ++ R
Sbjct: 66 EDDEGDSEEDDEGENKEDEDGESEDFEDGNDKESESGDEGNDDNKDAQMEELEKEVKELR 125
Query: 188 KHEGQRAEKLKKPSRWDNEQDKSPKSLRA 216
E + LK+ D + ++ K+ +A
Sbjct: 126 SQEQDILKNLKRDKGEDAVKGQAVKNQKA 154
>At4g39050.1 68417.m05531 kinesin-related protein (MKRP2) kinesin
motor protein - Ustilago maydis, PID:g2062750; identical
to cDNA MKRP2 mRNA for kinesin-related protein
GI:16902293, kinesin-related protein [Arabidopsis
thaliana] GI:16902294
Length = 1055
Score = 30.7 bits (66), Expect = 3.1
Identities = 15/63 (23%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 58 YDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQ--DDGFNSKLQIQEIKKDVKET 115
+ +G P ++ E+ + + + F+TS+ ++V+Q +D NS+ QIQ +++++ E
Sbjct: 576 FTQGVMTPDEIDLLVEQVKMLAGEIAFSTSTLKRLVDQSVNDPENSQTQIQNLEREIHEK 635
Query: 116 EKE 118
+++
Sbjct: 636 QRQ 638
>At3g09670.1 68416.m01146 PWWP domain-containing protein
Length = 726
Score = 30.7 bits (66), Expect = 3.1
Identities = 26/137 (18%), Positives = 59/137 (43%), Gaps = 5/137 (3%)
Query: 114 ETEKENELVFGKMYSDSEDDKPNVSEASP--SGRAKSKKKHNSDSDFSPPRRGNPVKRNN 171
E K ++ + ++ + ++ ++ E S G K + P ++ +
Sbjct: 411 EPTKSKQVYTKRRKTNLQTEQSSLVEVSDPDKGDCKHDGVFEYEETIVPKKKEKTLAEFI 470
Query: 172 SPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPR 231
+ KR + ++ + S + EK +K + ++ KS K ++AN S +S P+
Sbjct: 471 AEKRVSRHNGNTSHEKSGNVPHCEKKRKVVQ--SKVPKSTKKIKANLQTEDPGSPVS-PK 527
Query: 232 KTQTNKISSGQEMKIQK 248
+ N +S+G ++ QK
Sbjct: 528 NDRKNNLSAGDKITPQK 544
>At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1055
Score = 30.7 bits (66), Expect = 3.1
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 94 NQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHN 153
N D+ F+S+ + + +K + +E E+E E V S S+DD+ ++ SP ++ +
Sbjct: 6 NSDEAFSSEEEEERVKDNEEEDEEELEAV--ARSSGSDDDEVAAADESPVSDGEAAPVED 63
Query: 154 SDSDFSPPRRGNPVKRNNS 172
D + KR +
Sbjct: 64 DYEDEEDEEKAEISKREKA 82
>At2g31270.1 68415.m03818 hydroxyproline-rich glycoprotein family
protein
Length = 571
Score = 30.7 bits (66), Expect = 3.1
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 147 KSKKKHNSDSDFSPPRRGNPVKRNNS-PKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDN 205
KSKK+ DS S + GNP + + P ++ LS R + K + +
Sbjct: 13 KSKKRLVMDSPSSKSQTGNPNPSSVALPTPEKPLENMLSRSRNRSVALSVKEIRQAAGSR 72
Query: 206 EQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMKIQKRYD 251
+ + P + A + SS SP ++ +NK + ++ K+ ++Y+
Sbjct: 73 RRSEDPVASSAKSRLFFDSSSSSPSKRKSSNK--NAEKEKLPEKYE 116
>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 382
Score = 30.7 bits (66), Expect = 3.1
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 109 KKDVKETEK-ENELVFGKMYSDSEDDKPNVSEA-SPSGRAKSKKKHNSDSDFSPPRRGNP 166
K KE EK E K Y + E+++ + S + SP +SKKKH SD S +
Sbjct: 41 KSKSKEEEKPEKSKKKSKKYEEVEEEEKSPSPSPSPKKSKESKKKHKRSSDESEEIVDS- 99
Query: 167 VKRNNSPKRTTEYDSD 182
K P T E DSD
Sbjct: 100 -KPVTVPIVTIESDSD 114
>At1g75310.1 68414.m08748 DNAJ heat shock N-terminal domain-containing
protein low similarity to SP|Q27974 Auxilin {Bos taurus};
contains Pfam profile PF00226: DnaJ domain
Length = 1448
Score = 30.7 bits (66), Expect = 3.1
Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 62 DDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGF---NSKLQIQEIKKDVKETEKE 118
D P+ A + EHI++ + + S W +V DD Q + +++ET++E
Sbjct: 966 DQFPEKASAVSNTEEHIEEIDSDSIQSGWSVVEDDDRSLQDGGASQAESKHDELEETKEE 1025
Query: 119 NELVFGKMYSDSEDDK 134
++ + + + DK
Sbjct: 1026 SDEMKTSLGVERNGDK 1041
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 30.7 bits (66), Expect = 3.1
Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 518 KRWSKGLKQLEAQEERLQDFMHEASKPLARHRDDADSENRLKQIERAGDPMLRYIQDRKR 577
KR + ++ +E+ + + EA + R R + + +L+ ERA LR + R+R
Sbjct: 432 KRNDRRSRERGEKEQEMDRYEREAERE--RSRKEREQRRKLEDAERAYQTRLRQWERRER 489
Query: 578 E---EGNLPPERPKYKGNFPPNRFNLRPGYRWDGVDRSNGYEKKFFEQQSKRKAQEEE 632
E E E+ K K D D + + +++ +R+ +E+E
Sbjct: 490 EKEKERQYEKEKEKEKERKRKKEIRYEEEEEEDDDDSRRRWHRAALDERRRRQLREKE 547
>At5g03740.1 68418.m00335 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 287
Score = 30.3 bits (65), Expect = 4.1
Identities = 28/128 (21%), Positives = 39/128 (30%), Gaps = 1/128 (0%)
Query: 62 DDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENEL 121
DD + AG P+ KQ F ++ QDD + + D + + E E
Sbjct: 99 DDQLEAAGF-KAAPKSAAKQVNFQLPNEDVKAKQDDDADGSEEDSSDDDDSENSGDEEEE 157
Query: 122 VFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDS 181
EDD + E S KK + P N K T +
Sbjct: 158 KVTAESDSEEDDSSDDEEDDSSEEETPKKPEEPKKRSAEPNSSKNPASNKKAKFVTPQKT 217
Query: 182 DLSPPRKH 189
D P H
Sbjct: 218 DSKKPHVH 225
>At3g12860.1 68416.m01603 nucleolar protein Nop56, putative similar
to XNop56 protein [Xenopus laevis] GI:14799394; contains
Pfam profile PF01798: Putative snoRNA binding domain
Length = 499
Score = 30.3 bits (65), Expect = 4.1
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 12/112 (10%)
Query: 46 KLRPLEGDELDVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQI 105
KLR + LD YD+G + ++ E E+++K+++ K V+ + K +
Sbjct: 399 KLREQVEERLDFYDKGVAPRKNVDVMKEVLENLEKKDEGE-----KTVDASE--KKKKRK 451
Query: 106 QEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSD 157
E K++ KE EK K S+ + A+ +G +K KKK S D
Sbjct: 452 TEEKEEEKEEEKSK-----KKKKKSKAVEGEELTATDNGHSKKKKKTKSQDD 498
>At2g28910.1 68415.m03513 CAX-interacting protein 4 (CAXIP4)
contains Pfam domain PF00098: Zinc knuckle; identical to
cDNA CAX-interacting protein 4 GI:27651998
Length = 332
Score = 30.3 bits (65), Expect = 4.1
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 11/159 (6%)
Query: 102 KLQIQEIK-KDVKETEKENELVFGKM---YSDSEDDKPNVSEASPSGRAKSKKKHNSDSD 157
K +++E+ ++ +E+E + V +M ++ K S + + KKK SD
Sbjct: 130 KGEVEEVSSEEEEESESSDSDVDSEMERIIAERFGKKKGGSSVKKTSSVRKKKKRVSDES 189
Query: 158 FSPPRRGNPVKRNNS-PKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRA 216
S G+ +R S KR++ LS E R+++ K+ ++D S +S
Sbjct: 190 DSDSDSGDRKRRRRSMKKRSSHKRRSLSESEDEEEGRSKRRKERRGRKRDEDDSDESEDE 249
Query: 217 NNHR-RSKSSDLSPPRKTQTNKIS-----SGQEMKIQKR 249
++ R + KS R+++ N S ++ + QKR
Sbjct: 250 DDRRVKRKSRKEKRRRRSRRNHSDDSDSESSEDDRRQKR 288
Score = 29.1 bits (62), Expect = 9.5
Identities = 25/128 (19%), Positives = 54/128 (42%), Gaps = 9/128 (7%)
Query: 57 VYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETE 116
V DE D +G R +KK+ S + ++++G + + + + +K ++
Sbjct: 185 VSDESDSDSD-SGDRKRRRRSMKKRSSHKRRSLSESEDEEEGRSKRRKERRGRKRDEDDS 243
Query: 117 KENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRT 176
E+E D +D + R +S++ H+ DSD KR N +
Sbjct: 244 DESE--------DEDDRRVKRKSRKEKRRRRSRRNHSDDSDSESSEDDRRQKRRNKVAAS 295
Query: 177 TEYDSDLS 184
++ ++++S
Sbjct: 296 SDSEANVS 303
>At2g17580.1 68415.m02034 polynucleotide adenylyltransferase family
protein similar to SP|P13685 Poly(A) polymerase (EC
2.7.7.19) {Escherichia coli O157:H7}; contains Pfam
profile PF01743: polyA polymerase family protein
Length = 757
Score = 30.3 bits (65), Expect = 4.1
Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 11/143 (7%)
Query: 116 EKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKR 175
EK++EL K + +++ V +++ S K K+ DS+ + + R S
Sbjct: 554 EKKDELFVSKSSKEDNNNQTPVHDSNASSVLKILKRTREDSEQNNDQETEVCPRTPSGPA 613
Query: 176 TTEYDSDLSPPRKHEGQRA-------EKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLS 228
+ S + ++ + A +K K SR D+++ S+ A +S D +
Sbjct: 614 KNQDQSVVQMLKRRRSKEAPVSEPPKQKTSKRSRSDDQEAVGSLSVPAKIQHQSNKHDTN 673
Query: 229 PP----RKTQTNKISSGQEMKIQ 247
P K +T+K S + K++
Sbjct: 674 APICELPKQKTSKNHSKESRKVK 696
>At1g61170.1 68414.m06893 expressed protein
Length = 251
Score = 30.3 bits (65), Expect = 4.1
Identities = 29/138 (21%), Positives = 60/138 (43%), Gaps = 8/138 (5%)
Query: 119 NELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGN--PVKRNNSPKRT 176
+E V + + D++ + + S R+ +K + + P RR + P KRNN
Sbjct: 103 SESVSSTVVMNGYDEEHVMMKQRKSQRSPAKTRTQVTGNNYPTRRTDQSPRKRNNGTCNG 162
Query: 177 TEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTN 236
Y S + P + G+R+ + P+ + D S +S R + K++ P + + +
Sbjct: 163 ARYGSGVRDPGERSGRRS---RSPATNRSVMD-SNQSSRVGGAKTRKNN--QSPGRVRLD 216
Query: 237 KISSGQEMKIQKRYDVTS 254
+G + + + Y T+
Sbjct: 217 PAKNGLDQQQHQNYGYTT 234
>At1g60590.1 68414.m06820 polygalacturonase, putative / pectinase,
putative similar to polygalacturonase PG1 (GI:5669846),
PG2 (GI:5669848) from [Glycine max]; contains PF00295:
Glycosyl hydrolases family 28 (polygalacturonases)
Length = 540
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 204 DNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQEMKIQ 247
D+ K PKS N+H S S P KTQ K + G + Q
Sbjct: 50 DSLSSKKPKSHENNHHHMSHKSKPKPKMKTQPPKSNDGSPVVSQ 93
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 30.3 bits (65), Expect = 4.1
Identities = 30/174 (17%), Positives = 72/174 (41%), Gaps = 5/174 (2%)
Query: 59 DEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKE 118
D ++ + G R + +K+ ++ S+ DD K + +E ++ ++ ++
Sbjct: 30 DRSNERKKDKGSEKRREKDRRKKRVKSSDSEDDYDRDDDEEREKRKEKERERRRRDKDRV 89
Query: 119 NELVFGKMYSDSEDDKPNVSEASP---SGRAKSKKKHNSDSDFSPPR-RGNPVKRNNSPK 174
+ SDSEDD E + + + ++H D R R +++ +
Sbjct: 90 KRRSERRKSSDSEDDVEEEDERDKRRVNEKERGHREHERDRGKDRKRDREREERKDKERE 149
Query: 175 RTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLS 228
R + + + E +R ++ ++ R D E+D+ + + RR++ + S
Sbjct: 150 REKDRERREREREEREKERVKERERREREDGERDRRERE-KERGSRRNRERERS 202
>At1g02840.3 68414.m00246 pre-mRNA splicing factor SF2 (SF2) / SR1
protein identical to SP|O22315 Pre-mRNA splicing factor
SF2 (SR1 protein) {Arabidopsis thaliana}
Length = 303
Score = 30.3 bits (65), Expect = 4.1
Identities = 29/124 (23%), Positives = 46/124 (37%), Gaps = 3/124 (2%)
Query: 110 KDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKR 169
K + +TE N G + D + + S + GR+ SK + S R R
Sbjct: 174 KKLDDTEFRNAFSNGYVRVREYDSRKD-SRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSR 232
Query: 170 NNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSP 229
+ SPK + S + G R++ R + +SP L + SKS
Sbjct: 233 SRSPKAKSSRRSPAKSTSRSPGPRSKSRSPSPRRSRSRSRSP--LPSVQKEGSKSPSKPS 290
Query: 230 PRKT 233
P K+
Sbjct: 291 PAKS 294
>At1g02840.1 68414.m00245 pre-mRNA splicing factor SF2 (SF2) / SR1
protein identical to SP|O22315 Pre-mRNA splicing factor
SF2 (SR1 protein) {Arabidopsis thaliana}
Length = 303
Score = 30.3 bits (65), Expect = 4.1
Identities = 29/124 (23%), Positives = 46/124 (37%), Gaps = 3/124 (2%)
Query: 110 KDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKR 169
K + +TE N G + D + + S + GR+ SK + S R R
Sbjct: 174 KKLDDTEFRNAFSNGYVRVREYDSRKD-SRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSR 232
Query: 170 NNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSP 229
+ SPK + S + G R++ R + +SP L + SKS
Sbjct: 233 SRSPKAKSSRRSPAKSTSRSPGPRSKSRSPSPRRSRSRSRSP--LPSVQKEGSKSPSKPS 290
Query: 230 PRKT 233
P K+
Sbjct: 291 PAKS 294
>At5g57320.1 68418.m07160 villin, putative similar to villin 2
(VLN2) [Arabidopsis thaliana] GI:3415115, villin 3
(VLN3) [Arabidopsis thaliana] GI:3415117; contains Pfam
profiles PF00626: Gelsolin repeat, PF02209: Villin
headpiece domain
Length = 962
Score = 29.9 bits (64), Expect = 5.4
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Query: 133 DKPNVSEASPSGRAKSK--KKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHE 190
D+ V SP+ A + +K N + +PP +P+ R PK S ++P +
Sbjct: 779 DRARVRGRSPAFNALAANFEKLNIRNQSTPPPMVSPMVRKLYPKSHAPDLSKIAP-KSAI 837
Query: 191 GQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSS 225
R +KP+ E SP S A N + S
Sbjct: 838 AARTALFEKPTPTSQEPPTSPSSSEATNQAEAPKS 872
>At5g37380.2 68418.m04492 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 29.9 bits (64), Expect = 5.4
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 115 TEKENELVFGKMYS-DSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSP 173
++KE + + S S K +VS ++ +K +++ + PR P ++ N P
Sbjct: 118 SDKEKRAAYDRRKSLHSVYQKVSVSSSNNGFCNFAKTTFTTNARTTTPRNNPPAQKTNPP 177
Query: 174 KRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQ---DKSPKSLRANNHRRSKSS 225
+ T +PP + A+K P++ +N Q + K+ R +NH + +S
Sbjct: 178 AQKT------NPPAQKTNPPAQKNNPPTQKNNPQKPVGTTQKTGRTDNHTTTPNS 226
>At5g37380.1 68418.m04491 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 29.9 bits (64), Expect = 5.4
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 115 TEKENELVFGKMYS-DSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSP 173
++KE + + S S K +VS ++ +K +++ + PR P ++ N P
Sbjct: 118 SDKEKRAAYDRRKSLHSVYQKVSVSSSNNGFCNFAKTTFTTNARTTTPRNNPPAQKTNPP 177
Query: 174 KRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQ---DKSPKSLRANNHRRSKSS 225
+ T +PP + A+K P++ +N Q + K+ R +NH + +S
Sbjct: 178 AQKT------NPPAQKTNPPAQKNNPPTQKNNPQKPVGTTQKTGRTDNHTTTPNS 226
>At3g32900.1 68416.m04166 Ulp1 protease family protein similar to
At1g32840, At4g04010, At2g06430, At2g15140, At2g04980,
At2g14130, At3g44500, At2g15190, At3g47260, At5g34900,
At3g29210, At2g02210
Length = 654
Score = 29.9 bits (64), Expect = 5.4
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 8/134 (5%)
Query: 114 ETEKENELVFGKMYSDSEDDKPNVSEASPS-GRAKSKKKHNSDSDFSPPRRGNPVKRNNS 172
E E+E L K +D+E + ++ E + G ++ D SP R + N
Sbjct: 237 EAEEEGGLE-RKAENDNESFEDSIREPNTQYGSYPGDDENTQRDDKSPTLRSSTANFNIL 295
Query: 173 PKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRK 232
+ + + D R G+ K KPS + K+ K + ++ S+D+ P
Sbjct: 296 SEESLDVQKDKK--RVSRGRNENKRVKPSVHAEDNLKTRKQVPRKRQKQVDSADVDVP-- 351
Query: 233 TQTNKISSGQEMKI 246
T K + G++ KI
Sbjct: 352 --TRKEAQGKKRKI 363
>At2g27170.1 68415.m06029 structural maintenance of chromosomes
(SMC) family protein similar to basement
membrane-associated chondroitin proteoglycan Bamacan
[Rattus norvegicus] GI:1785540; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain. No suitalble
start codon was identified.
Length = 1207
Score = 29.9 bits (64), Expect = 5.4
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 71 IDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKL--QIQEIKKDVKETEKENEL--VFGKM 126
+ ER EHIKK E + +I + FN+K + +E +K ++ +E++L K+
Sbjct: 427 LTERDEHIKKHEVEIGELESRISKSHELFNTKKRERDEEQRKRKEKWGEESQLSSEIDKL 486
Query: 127 YSDSEDDKPNVSEASP 142
++ E K N+ A+P
Sbjct: 487 KTELERAKKNLDHATP 502
>At2g15370.1 68415.m01758 xyloglucan fucosyltransferase, putative
(FUT5) identical to SP|Q9SJP4 Probable
fucosyltransferase 5 (EC 2.4.1.-) (AtFUT5) {Arabidopsis
thaliana}; similar to xyloglucan fucosyltransferase
GI:5231145 from [Arabidopsis thaliana]
Length = 533
Score = 29.9 bits (64), Expect = 5.4
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 92 IVNQDDGFNSKLQIQEIKKDVKETEKE-NELVFGKMYSDSED 132
I++ + FN+KL K D+KETEK ++L+ G + +D ++
Sbjct: 33 ILSYSNNFNNKLLDATTKVDIKETEKPVDKLIGGLLTADFDE 74
>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 407
Score = 29.9 bits (64), Expect = 5.4
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Query: 321 PPRKSKRQISESPCRN---VPLRKKTNDSDSDLSPPRKNIRYAENKS-YRNVSKKPHRRN 376
PPR S R+I SP R +PLR++ SPP + +R +S R S+ P RR
Sbjct: 283 PPRGSPRRIRGSPVRRRSPLPLRRR--------SPPPRRLRSPPRRSPIRRRSRSPIRR- 333
Query: 377 DTKDSGSDLSP 387
+ S +SP
Sbjct: 334 PGRSRSSSISP 344
>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 414
Score = 29.9 bits (64), Expect = 5.4
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Query: 321 PPRKSKRQISESPCRN---VPLRKKTNDSDSDLSPPRKNIRYAENKS-YRNVSKKPHRRN 376
PPR S R+I SP R +PLR++ SPP + +R +S R S+ P RR
Sbjct: 290 PPRGSPRRIRGSPVRRRSPLPLRRR--------SPPPRRLRSPPRRSPIRRRSRSPIRR- 340
Query: 377 DTKDSGSDLSP 387
+ S +SP
Sbjct: 341 PGRSRSSSISP 351
>At5g35604.1 68418.m04242 hypothetical protein
Length = 298
Score = 29.5 bits (63), Expect = 7.2
Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 131 EDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHE 190
+D + ++ + R ++H P RGN R + + T+ LSPP +
Sbjct: 44 DDGSAEGARSAYAFRPTLHREHRGGRSPRRPSRGNSSPRRDKARARTDCSPRLSPPSRTM 103
Query: 191 GQRAEKLKKP-SRWDNEQ 207
G P S+W E+
Sbjct: 104 GPPPPVATSPSSQWSGEK 121
>At5g18810.1 68418.m02235 SC35-like splicing factor, 28 kD (SCL28)
nearly identical to SC35-like splicing factor SCL28, 28
kD [Arabidopsis thaliana] GI:9843655; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 236
Score = 29.5 bits (63), Expect = 7.2
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Query: 141 SPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKP 200
SP R K D +SP RR + R+ P+ EY S R R E++ P
Sbjct: 166 SPPRRESRHSKVREDDLYSPRRRSRSISRSPLPRNEREYKS-----RNCRSPREERVLTP 220
Query: 201 SR 202
R
Sbjct: 221 IR 222
>At5g15430.1 68418.m01806 calmodulin-binding protein-related has
weak similarity to calmodulin-binding proteins
Length = 478
Score = 29.5 bits (63), Expect = 7.2
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 102 KLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPP 161
K + + K + ETE E+E + + ED+ +VSE + R K +++S +
Sbjct: 294 KSEKSQDKGECIETEHEDESSQEEEDEEEEDENVSVSEDKNTTREGKSKAFSAESAIT-- 351
Query: 162 RRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAE 195
GN +K + ++ S+ + PRK + +R +
Sbjct: 352 --GNAMKLRIRRGKIIDFGSEGNSPRKLKFKRGK 383
>At4g02720.1 68417.m00368 expressed protein temporary automated
functional assignment
Length = 422
Score = 29.5 bits (63), Expect = 7.2
Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 10/140 (7%)
Query: 110 KDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKR 169
+D E EN DD E + KS + SD S R+ +
Sbjct: 68 RDQNEDSDENADEIQDKNGGERDDNSKGKER----KGKSDSESESDGLRSRKRKSKSSRS 123
Query: 170 NNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLR-ANNHRR-SKSSD- 226
KR+ + DS+ + + ++ S ++ +S +S R +HRR +K SD
Sbjct: 124 KRRRKRSYDSDSESEGSESDSEEEDRRRRRKSSSKRKKSRSSRSFRKKRSHRRKTKYSDS 183
Query: 227 ---LSPPRKTQTNKISSGQE 243
K + + SSG+E
Sbjct: 184 DESSDEDSKAEISASSSGEE 203
Score = 29.5 bits (63), Expect = 7.2
Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 4/125 (3%)
Query: 128 SDSEDDKPNVSEASPSGRAKS---KKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLS 184
S+SE + + E R KS +KK S F R + + +++ DS
Sbjct: 135 SESEGSESDSEEEDRRRRRKSSSKRKKSRSSRSFRKKRSHRRKTKYSDSDESSDEDSKAE 194
Query: 185 PPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSD-LSPPRKTQTNKISSGQE 243
G+ + K R D S K + + SD K Q ++ E
Sbjct: 195 ISASSSGEEEDTKSKSKRRKKSSDSSSKRSKGEKTKSGSDSDGTEEDSKMQVDETVKNTE 254
Query: 244 MKIQK 248
+++ +
Sbjct: 255 LELDE 259
>At3g62900.1 68416.m07066 expressed protein ; expression supported
by MPSS
Length = 1401
Score = 29.5 bits (63), Expect = 7.2
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 126 MYSDSEDDKPNVSEASPSGRAKSK--KKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSD- 182
M S+ KP ++ + + K K KK ++ D R K + R +S
Sbjct: 644 MQSNPSGPKPQFTQGDDNTKKKKKGFKKIDNGMDKEGARTAETNKTIQTSSRNGIQNSQG 703
Query: 183 LSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRS--KSSDLSPPRKTQT 235
L + E Q ++ +K D+ D+S KSL+ANN R++ +SS L+ K ++
Sbjct: 704 LGDLAEDERQIHKQKEKGKAVDHLSDES-KSLKANNKRKTDLESSMLAKKMKIES 757
>At3g49430.1 68416.m05403 pre-mRNA splicing factor, putative strong
similarity to SP|O22315 Pre-mRNA splicing factor SF2
(SR1 protein) {Arabidopsis thaliana}
Length = 300
Score = 29.5 bits (63), Expect = 7.2
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 139 EASPS-GRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSP-PRKHEGQRAEK 196
E+S S R+ S+ + S S RG R+ S R+ DLS PR+ + K
Sbjct: 199 ESSRSRSRSPSRSRSRSRSRSRSRGRGRSHSRSRSLSRSKSPRKDLSKSPRRSLSRSISK 258
Query: 197 LKKPSRWDNEQDKSPKSL-RANNH--RRSKSSDLSPPR 231
+ PS +++ P+++ R+ + RS+S SPP+
Sbjct: 259 SRSPS--PDKKKSPPRAMSRSKSRSRSRSRSPSKSPPK 294
>At3g29210.1 68416.m03664 hypothetical protein similar to At1g32840,
At4g04010, At2g06430, At2g15140, At2g04980, At2g14130,
At3g44500, At2g15190, At3g47260, At5g34900, At2g02210,
At3g32900
Length = 594
Score = 29.5 bits (63), Expect = 7.2
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 95 QDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKK--- 151
+D+G +L+ +E + ++ E +NE + DS + PN S G ++ ++
Sbjct: 385 EDEGLERRLEAEEGGLE-RKVENDNE-----SFEDSIRE-PNTQYGSYPGDDENAQRDVG 437
Query: 152 ----HNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQ 207
S D SP R + N + + + D R+ G+ K KPS +
Sbjct: 438 VEVAEESSKDKSPTPRSSTPNFNILSEESLDVQKDKKRVRR--GRNENKRVKPSVHAEDN 495
Query: 208 DKSPKSLRANNHRRSKSSDLS-PPRKTQTNK 237
K+ K + ++ S+D+ P RK NK
Sbjct: 496 LKTRKQVPRKRQKQVDSADVDVPTRKEAQNK 526
>At2g42150.1 68415.m05217 DNA-binding bromodomain-containing protein
contains Pfam domains, PF00439: Bromodomain and PF00249:
Myb-like DNA-binding domain
Length = 631
Score = 29.5 bits (63), Expect = 7.2
Identities = 18/101 (17%), Positives = 42/101 (41%)
Query: 129 DSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRK 188
D DK ++ G +K K+ + + +KR+++ +T + RK
Sbjct: 497 DDSKDKVKKTDEEKKGGSKKKRAASFLRRMKVGSSDDTLKRSSAADSSTTGKGGGAEQRK 556
Query: 189 HEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSP 229
+ +A+ K P + +K ++ +N+ R+ + +P
Sbjct: 557 NNSNKADNKKTPIPKIRQTNKKASPVKRSNNGRNSEREAAP 597
>At2g26570.1 68415.m03187 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
weak similarity to merozoite surface protein 3 alpha
(GI:27596802) [Plasmodium vivax]
Length = 807
Score = 29.5 bits (63), Expect = 7.2
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 514 DEKYKRWSKGLKQLEAQEERLQDFMHEASKPLARHRDDADS 554
D+ RW K LKQ E + +RL +H +SK L D A +
Sbjct: 379 DQDTHRWEKELKQAEEELQRLNQQIH-SSKDLKSKLDTASA 418
>At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing
protein
Length = 561
Score = 29.5 bits (63), Expect = 7.2
Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 10/126 (7%)
Query: 104 QIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKS--KKKHNSDSDFSPP 161
+ + ++K V+ ENE+ G E K E S S R + KK+ + D D
Sbjct: 5 EYEYLEKTVENPHLENEVGNG---GGDEKVKSEGKERSRSSRHRGDKKKERDEDEDGRRS 61
Query: 162 RRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSR--WDNEQDK-SPKSLRANN 218
+R R+ S R E D S + R + + K R D E+D+ + + +
Sbjct: 62 KRSRSHHRSRS--RDRERDRHRSSREHRDRDREKDVDKEERNGKDRERDRDKDRDSKGRD 119
Query: 219 HRRSKS 224
H + +S
Sbjct: 120 HEKDRS 125
>At1g32840.1 68414.m04047 Ulp1 protease family protein similar to
At4g04010, At2g06430, At2g15140, At2g04980, At2g14130,
At3g44500, At2g15190, At3g47260, At5g34900, At3g29210,
At2g02210, At3g32900
Length = 611
Score = 29.5 bits (63), Expect = 7.2
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 102 KLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPS-GRAKSKKKHNSDSDFSP 160
K + +E+++ + E E+E L K +D+E + ++ E + G ++ D SP
Sbjct: 186 KQEHEEVERQL-EAEEEGGLE-RKAENDNESFEDSIREPNTQYGSYPGDDENTQRDDKSP 243
Query: 161 PRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHR 220
R + N + + + D R G+ K KPS + K+ K + +
Sbjct: 244 TPRSSTPSFNILSEESLDVQKDKK--RVSRGRNENKRVKPSVHAEDNLKTRKQVPRKRQK 301
Query: 221 RSKSSDLS-PPRKTQTNK 237
+ S+D+ P RK +K
Sbjct: 302 QVDSADVDVPTRKEAQSK 319
>At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24280) [Saccharomyces
cerevisiae]; ESTs gb|T76582, gb|N06574 and gb|Z25700
come from this gene
Length = 540
Score = 29.5 bits (63), Expect = 7.2
Identities = 19/106 (17%), Positives = 42/106 (39%), Gaps = 3/106 (2%)
Query: 72 DERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSE 131
+ +PE ++K F S + ++ + K + ++K ++E +N L+ K S
Sbjct: 42 ESKPEGVEKSASFKEESDFFADLKE---SEKKALSDLKSKLEEAIVDNTLLKTKKKESSP 98
Query: 132 DDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTT 177
+ P + KK+ ++ ++ V +PK T
Sbjct: 99 MKEKKEEVVKPEAEVEKKKEEAAEEKVEEEKKSEAVVTEEAPKAET 144
>At1g09050.1 68414.m01009 expressed protein
Length = 916
Score = 29.5 bits (63), Expect = 7.2
Identities = 31/139 (22%), Positives = 57/139 (41%), Gaps = 9/139 (6%)
Query: 91 KIVNQDDGFNSKLQIQEIKKDVKETEKENELVFG-KMYSDSEDDKPNVSEASPSGRAKSK 149
++++ + N + E+ K ++ E + VF S S + P+ + S+
Sbjct: 715 ELISAEPKTNGICSVSELDKKRASSDLEQKQVFELPSISGSNNRSPSNDLGTSQEMGSSE 774
Query: 150 KKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPS-RWDNEQD 208
++HN PRR + KR + + +SD + R + KP R
Sbjct: 775 QQHNQQIKTDGPRRQSTRKRPLTTRALEALESDFLITK-----RMKSTTKPEPRKHESST 829
Query: 209 KSPKSLRANNHRRSKSSDL 227
K +S +A N R+ S+DL
Sbjct: 830 KKKRSAKACN--RNGSADL 846
>At5g52040.2 68418.m06459 arginine/serine-rich splicing factor RSP41
(RSP41) nearly identical to SP|P92966
Arginine/serine-rich splicing factor RSP41 {Arabidopsis
thaliana}
Length = 357
Score = 29.1 bits (62), Expect = 9.5
Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 5/115 (4%)
Query: 132 DDKPNVSEASPSG---RAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRK 188
DD+ ASP R +S +K +S PP R+ P +S PP +
Sbjct: 245 DDRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRSPPPYEKRR-ESRSPPPYE 303
Query: 189 HEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQE 243
+R+ K S +N Q +SP + R SP R++ ++ +E
Sbjct: 304 KRRERSRSRSKSSP-ENGQVESPGQIMEVEAGRGYDGADSPIRESSPSRSPPAEE 357
>At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1298
Score = 29.1 bits (62), Expect = 9.5
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 339 LRKKTNDSDSDLSPPRKNIRYAENKSYRNVSKKPHRRNDTKDSG 382
+R K+ D +SD+ + + E+ + N S + R D+ D G
Sbjct: 1233 IRAKSEDKNSDIGRETDHFQECEDSNISNESNQSEERGDSDDDG 1276
>At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 385
Score = 29.1 bits (62), Expect = 9.5
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 137 VSEASPSGRAKSKKKHNS-DSDFSPPR-RGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRA 194
V + SP R++S+ ++ DSD R R +R R E + D R+ R
Sbjct: 232 VQQRSPR-RSQSRDYYSDRDSDRQREREREKDRERERGRDRYRERERDYGNDRR---SRR 287
Query: 195 EKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQE 243
+ + R D E D+S R+ + RS+S + R+ + SS +E
Sbjct: 288 DYDSRSRRNDYEDDRSRHDRRSRSRSRSRSRSVQIEREPTPKRDSSNKE 336
>At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 393
Score = 29.1 bits (62), Expect = 9.5
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 137 VSEASPSGRAKSKKKHNS-DSDFSPPR-RGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRA 194
V + SP R++S+ ++ DSD R R +R R E + D R+ R
Sbjct: 240 VQQRSPR-RSQSRDYYSDRDSDRQREREREKDRERERGRDRYRERERDYGNDRR---SRR 295
Query: 195 EKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKISSGQE 243
+ + R D E D+S R+ + RS+S + R+ + SS +E
Sbjct: 296 DYDSRSRRNDYEDDRSRHDRRSRSRSRSRSRSVQIEREPTPKRDSSNKE 344
>At4g00520.1 68417.m00071 acyl-CoA thioesterase family protein
contains Pfam profile: PF02551 acyl-CoA thioesterase
Length = 283
Score = 29.1 bits (62), Expect = 9.5
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 322 PRKSKRQISESPCRNVPLRKKTNDSDSDLSPPRKNIRYAENKSYRNVSKKPHRR 375
P +S +Q P R K SD D + R + +A + + +S PHRR
Sbjct: 153 PNRSTKQNKSPPRLKYWFRAKGKLSDDDQALHRCVVAFASDLIFATISLNPHRR 206
>At3g59800.1 68416.m06673 expressed protein
Length = 186
Score = 29.1 bits (62), Expect = 9.5
Identities = 18/87 (20%), Positives = 34/87 (39%)
Query: 114 ETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSP 173
+ E+ +L G+ YS + K S ++K +K ++S S + +S
Sbjct: 88 DAERSLKLSKGRNYSSDKSRKDKKDRDSKKKKSKKRKHYSSSESSSSSDEDESRRSRSSS 147
Query: 174 KRTTEYDSDLSPPRKHEGQRAEKLKKP 200
KR+ + S KH + + P
Sbjct: 148 KRSKKEKKHKSSRDKHSSKSKHETDGP 174
>At3g01710.1 68416.m00105 expressed protein
Length = 319
Score = 29.1 bits (62), Expect = 9.5
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 97 DGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDS 156
+G ++ Q+ E K +K +K++ K KP VS+ + S R SKK +N S
Sbjct: 169 NGRTAEEQVDEEKPILKSVKKKS-----KDSQPKSSTKPRVSKYNSSERTPSKKSNNKSS 223
Query: 157 D--FSPPRRGN 165
F+P + N
Sbjct: 224 SYTFTPAKEFN 234
>At1g78120.1 68414.m09104 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 530
Score = 29.1 bits (62), Expect = 9.5
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 141 SPSGRAKS--KKKHNSDSDFSPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLK 198
SP R S +K H + + S P+++T+ S P+K + Q+ ++
Sbjct: 27 SPRRRKPSLPEKDHRAKDNLSSKSSTTVTNPKILPRKSTDTSSQ---PKKSDSQKPQQKP 83
Query: 199 KPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQTNKIS 239
KP +N KS +S R ++ KS S +T++ + S
Sbjct: 84 KPD--ENHPRKSSESARKSSDSARKSIS-SGSSRTESKRFS 121
Score = 29.1 bits (62), Expect = 9.5
Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 5/94 (5%)
Query: 159 SPPRRGNPVKRNNSPKRTTEYDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANN 218
S P + + K N S K +T + PRK ++ K S+ ++ K + N
Sbjct: 34 SLPEKDHRAKDNLSSKSSTTVTNPKILPRKSTDTSSQPKKSDSQKPQQKPKPDE-----N 88
Query: 219 HRRSKSSDLSPPRKTQTNKISSGQEMKIQKRYDV 252
H R S + ISSG KR+ +
Sbjct: 89 HPRKSSESARKSSDSARKSISSGSSRTESKRFSL 122
>At1g76360.1 68414.m08872 protein kinase, putative similar to
protein kinase APK1B, SWISS-PROT:P46573; contains
protein kinase domain, Pfam:PF00069
Length = 484
Score = 29.1 bits (62), Expect = 9.5
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 321 PPRKSKRQISESPCRNVPLRKKTNDSDSDLSPPRKNIRYAENKSYRNVSKKPHRRNDTKD 380
PPR+ ++ + S N P K + S +PP++ R +N + V K R
Sbjct: 81 PPREKPQEKTRS-VENPPREKPQEKTRSVETPPQEKTRPVDNPPSKPVEKLGLGRKAVPP 139
Query: 381 SGSDLSPPRKL 391
SG ++P K+
Sbjct: 140 SGKIVTPNLKM 150
>At1g58050.1 68414.m06579 helicase domain-containing protein
contains similarity to SP|P24785 Dosage compensation
regulator (Male-less protein) (No action potential
protein) {Drosophila melanogaster}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 1417
Score = 29.1 bits (62), Expect = 9.5
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 51 EGDELDVYDEGDDAPQVAGIIDERPEHIKKQEQFTTSSKWKIVNQDDGFNSKLQIQEIKK 110
E D+LDV A + + + E +KQE K+K + + + L I E+KK
Sbjct: 548 ENDDLDVVKSNHRARRNSSMAAECSSLKQKQENKKKMQKYKDMLKT---RAALPISEVKK 604
Query: 111 DVKETEKENELV 122
D+ + KE +++
Sbjct: 605 DILQKLKEKDVL 616
>At1g32810.1 68414.m04044 expressed protein
Length = 654
Score = 29.1 bits (62), Expect = 9.5
Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 18/184 (9%)
Query: 75 PEHIKKQEQFTTSSKWKIVNQDDGFNSK--LQIQEIKKDVKETEKENELVFGKM------ 126
P+ K Q S N+D K L + E +KD++ET K ++F +
Sbjct: 76 PDDHKPQSVEMVSEGISSGNRDRAIELKRELVVSETEKDIQET-KPGSVLFQEPSKPCRP 134
Query: 127 --YSDSEDDKPN----VSEASPSGRAKSKKKHNSDSDFSPPRRGNPVKRNNSPKRTTE-- 178
++ S + +P + + S S + K ++ + P + P +N E
Sbjct: 135 IPHTVSGNGRPKMVVCIGKTSSSSATEKSPKPSTSRNSIPGLKQQPGDDDNDANTNDEDC 194
Query: 179 YDSDLSPPRKHEGQRAEKLKKPSRWDNEQDKSPKSLRANNHRRSKSSDLSPPRKTQT-NK 237
SD+ R + + +EK K ++ KS + R ++ SK+ + S KT + +
Sbjct: 195 VSSDVIRERDGDDEPSEKAPKHPKFSITSKKSMQHNRTSHSSVSKTRESSSSSKTSSATR 254
Query: 238 ISSG 241
I+ G
Sbjct: 255 INGG 258
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.307 0.127 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,581,719
Number of Sequences: 28952
Number of extensions: 638917
Number of successful extensions: 2618
Number of sequences better than 10.0: 134
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 2323
Number of HSP's gapped (non-prelim): 346
length of query: 641
length of database: 12,070,560
effective HSP length: 86
effective length of query: 555
effective length of database: 9,580,688
effective search space: 5317281840
effective search space used: 5317281840
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 62 (29.1 bits)
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