BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000112-TA|BGIBMGA000112-PA|undefined (100 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_2537| Best HMM Match : zf-C2HC5 (HMM E-Value=2.5e-28) 29 0.86 SB_56291| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.1 SB_20374| Best HMM Match : zf-U1 (HMM E-Value=1.7) 28 1.1 SB_51937| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 27 2.0 SB_49539| Best HMM Match : RVT_1 (HMM E-Value=1.8e-39) 27 2.0 SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 27 2.0 SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38) 27 2.0 SB_30649| Best HMM Match : zf-C2H2 (HMM E-Value=1.7e-24) 27 2.0 SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38) 27 2.0 SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 27 2.0 SB_9368| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.0 SB_155| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 27 2.0 SB_46071| Best HMM Match : RVP (HMM E-Value=3e-05) 27 2.0 SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37) 27 2.0 SB_28983| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.0 SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 27 2.0 SB_23675| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 27 2.0 SB_19158| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 27 2.0 SB_15324| Best HMM Match : RVP (HMM E-Value=8.1e-05) 27 2.0 SB_10983| Best HMM Match : RVP (HMM E-Value=3.8e-05) 27 2.0 SB_2341| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.5 SB_39371| Best HMM Match : Lectin_C (HMM E-Value=1.4e-06) 26 4.6 SB_25065| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.6 SB_31380| Best HMM Match : zf-CCHC (HMM E-Value=4.6e-05) 26 6.1 SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 25 8.0 SB_58580| Best HMM Match : zf-AD (HMM E-Value=0.29) 25 8.0 SB_55440| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0 SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0 SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 25 8.0 SB_1181| Best HMM Match : DUF1604 (HMM E-Value=0) 25 8.0 SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0 SB_43654| Best HMM Match : zf-AD (HMM E-Value=0.2) 25 8.0 SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15) 25 8.0 SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.0 SB_20896| Best HMM Match : TSP_1 (HMM E-Value=4.8e-28) 25 8.0 SB_14987| Best HMM Match : TPR_2 (HMM E-Value=0.0065) 25 8.0 SB_8757| Best HMM Match : zf-C2H2 (HMM E-Value=0) 25 8.0 >SB_2537| Best HMM Match : zf-C2HC5 (HMM E-Value=2.5e-28) Length = 523 Score = 28.7 bits (61), Expect = 0.86 Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%) Query: 24 RNTVESGGRVVGENKALTAKKGRFNPYTSTFQQCKICRTKVHQVGSHYCQACAYKKGI-- 81 + T + G + K + +K + + + + R+ V G H C+ K G+ Sbjct: 85 KETSPTKGNSKADKKIVEQEKKKSTKFVPLYSKEGEARSSVRLPGRHPCECLGQKHGLVN 144 Query: 82 -CAMCGKKILD 91 C CG+ + D Sbjct: 145 NCTSCGRIVCD 155 >SB_56291| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 434 Score = 28.3 bits (60), Expect = 1.1 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Query: 12 RVITPDPWKAGARNTVESGGRVVGENKALTAKK 44 RV+T + W AG VE ++GEN A T +K Sbjct: 316 RVVTANVWTAGTNANVEMD--IIGENGAETGEK 346 >SB_20374| Best HMM Match : zf-U1 (HMM E-Value=1.7) Length = 783 Score = 28.3 bits (60), Expect = 1.1 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 35 GENKALTAKKGRFNPYTSTFQQCKICRTKVHQVGSHYCQACAYKKGICAMCGKK 88 G + K F+ + +QC +C + + C+AC K +C C +K Sbjct: 232 GSKSGASHIKDMFSKVLGSTEQCLMCLQNDKRC-TFLCEACYNDKDVCDQCSEK 284 >SB_51937| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) Length = 151 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 61 RTKVHQVGS--HYCQACAYKKGICAMCGK 87 +T H+ GS H ++C YKK C CGK Sbjct: 106 KTACHRCGSAEHDGKSCKYKKYKCDNCGK 134 >SB_49539| Best HMM Match : RVT_1 (HMM E-Value=1.8e-39) Length = 1311 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 61 RTKVHQVGS--HYCQACAYKKGICAMCGK 87 +T H+ GS H ++C YKK C CGK Sbjct: 106 KTACHRCGSAEHDGKSCKYKKYKCDNCGK 134 >SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) Length = 1510 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 61 RTKVHQVGS--HYCQACAYKKGICAMCGK 87 +T H+ GS H ++C YKK C CGK Sbjct: 208 KTACHRCGSAEHDGKSCKYKKYKCDNCGK 236 >SB_39101| Best HMM Match : RVT_1 (HMM E-Value=2.4e-38) Length = 856 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 61 RTKVHQVGS--HYCQACAYKKGICAMCGK 87 +T H+ GS H ++C YKK C CGK Sbjct: 351 KTACHRCGSAEHDGKSCKYKKYKCDNCGK 379 >SB_30649| Best HMM Match : zf-C2H2 (HMM E-Value=1.7e-24) Length = 463 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/62 (20%), Positives = 28/62 (45%) Query: 38 KALTAKKGRFNPYTSTFQQCKICRTKVHQVGSHYCQACAYKKGICAMCGKKILDTKNYRQ 97 KA T P+ T++ C+ + ++ HY K+ +C +C K+ + + + + Sbjct: 382 KAHTRTHTGERPFMCTWKDCEKRFARSDELARHYRTHTGEKRYVCKICDKRFMRSDHLSK 441 Query: 98 SS 99 S Sbjct: 442 HS 443 >SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38) Length = 1425 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 61 RTKVHQVGS--HYCQACAYKKGICAMCGK 87 +T H+ GS H ++C YKK C CGK Sbjct: 877 KTACHRCGSAEHDGKSCKYKKYKCDNCGK 905 >SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) Length = 794 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 61 RTKVHQVGS--HYCQACAYKKGICAMCGK 87 +T H+ GS H ++C YKK C CGK Sbjct: 343 KTACHRCGSAEHDGKSCKYKKYKCDNCGK 371 >SB_9368| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 874 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 61 RTKVHQVGS--HYCQACAYKKGICAMCGK 87 +T H+ GS H ++C YKK C CGK Sbjct: 423 KTACHRCGSAEHDGKSCKYKKYKCDNCGK 451 >SB_155| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) Length = 296 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 61 RTKVHQVGS--HYCQACAYKKGICAMCGK 87 +T H+ GS H ++C YKK C CGK Sbjct: 208 KTACHRCGSAEHDGKSCKYKKYKCDNCGK 236 >SB_46071| Best HMM Match : RVP (HMM E-Value=3e-05) Length = 403 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 61 RTKVHQVGS--HYCQACAYKKGICAMCGK 87 +T H+ GS H ++C YKK C CGK Sbjct: 208 KTACHRCGSAEHDGKSCKYKKYKCDNCGK 236 >SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37) Length = 1122 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 61 RTKVHQVGS--HYCQACAYKKGICAMCGK 87 +T H+ GS H ++C YKK C CGK Sbjct: 224 KTACHRCGSAEHDGKSCKYKKYKCDNCGK 252 >SB_28983| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 951 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 61 RTKVHQVGS--HYCQACAYKKGICAMCGK 87 +T H+ GS H ++C YKK C CGK Sbjct: 494 KTACHRCGSAEHDGKSCKYKKYKCDNCGK 522 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 61 RTKVHQVGS--HYCQACAYKKGICAMCGK 87 +T H+ GS H ++C YKK C CGK Sbjct: 547 KTACHRCGSAEHDGKSCKYKKYKCDNCGK 575 >SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) Length = 1750 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 61 RTKVHQVGS--HYCQACAYKKGICAMCGK 87 +T H+ GS H ++C YKK C CGK Sbjct: 186 KTACHRCGSAEHDGKSCKYKKYKCDNCGK 214 >SB_23675| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) Length = 342 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 61 RTKVHQVGS--HYCQACAYKKGICAMCGK 87 +T H+ GS H ++C YKK C CGK Sbjct: 181 KTACHRCGSAEHDGKSCKYKKYKCDNCGK 209 >SB_19158| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) Length = 369 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 61 RTKVHQVGS--HYCQACAYKKGICAMCGK 87 +T H+ GS H ++C YKK C CGK Sbjct: 208 KTACHRCGSAEHDGKSCKYKKYKCDNCGK 236 >SB_15324| Best HMM Match : RVP (HMM E-Value=8.1e-05) Length = 415 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 61 RTKVHQVGS--HYCQACAYKKGICAMCGK 87 +T H+ GS H ++C YKK C CGK Sbjct: 45 KTACHRCGSAEHDGKSCKYKKYKCDNCGK 73 >SB_10983| Best HMM Match : RVP (HMM E-Value=3.8e-05) Length = 717 Score = 27.5 bits (58), Expect = 2.0 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 61 RTKVHQVGS--HYCQACAYKKGICAMCGK 87 +T H+ GS H ++C YKK C CGK Sbjct: 247 KTACHRCGSAEHDGKSCKYKKYKCDNCGK 275 >SB_2341| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 731 Score = 26.6 bits (56), Expect = 3.5 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Query: 23 ARNTVESGGRVVGENK--ALTAKKGRFNPYTSTFQQCKICR 61 A+N + +V+ E+ +T K F+P ++T ++ KICR Sbjct: 164 AKNVSKKNVKVLDEDTYVQVTPDKQEFSPKSNTLEKSKICR 204 >SB_39371| Best HMM Match : Lectin_C (HMM E-Value=1.4e-06) Length = 490 Score = 26.2 bits (55), Expect = 4.6 Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 28 ESGGRVVGENKALTAKKGRFNPYTSTFQQCKICR 61 ES GR + + +T +K F+P +T + KI R Sbjct: 439 ESAGRYLKTRREVTPEKLGFSPQNNTLEMSKIWR 472 >SB_25065| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 161 Score = 26.2 bits (55), Expect = 4.6 Identities = 10/28 (35%), Positives = 14/28 (50%) Query: 51 TSTFQQCKICRTKVHQVGSHYCQACAYK 78 TS C C TK+ + + +C AC K Sbjct: 9 TSVAMFCHCCGTKISEENTKFCFACGEK 36 >SB_31380| Best HMM Match : zf-CCHC (HMM E-Value=4.6e-05) Length = 1082 Score = 25.8 bits (54), Expect = 6.1 Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 12/63 (19%) Query: 26 TVESGGRVVGE-NKALTAKKGRFNPYTSTFQQCKICRTKVHQVGSHYCQACAYKKGICAM 84 T E + G NK TA+KG N + +CK G HY C +K C Sbjct: 192 TTEKASSLQGTVNKLGTARKG--NTEEPSCYRCK---------GKHYASNCKFKLAKCFK 240 Query: 85 CGK 87 C K Sbjct: 241 CSK 243 >SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) Length = 362 Score = 25.4 bits (53), Expect = 8.0 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%) Query: 79 KGICAMCGKKILDTKN-YRQS 98 KG+C +CGK++ K+ Y QS Sbjct: 15 KGLCRVCGKRLKKAKSLYAQS 35 >SB_58580| Best HMM Match : zf-AD (HMM E-Value=0.29) Length = 233 Score = 25.4 bits (53), Expect = 8.0 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%) Query: 79 KGICAMCGKKILDTKN-YRQS 98 KG+C +CGK++ K+ Y QS Sbjct: 42 KGLCRVCGKRLKKAKSLYAQS 62 >SB_55440| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 382 Score = 25.4 bits (53), Expect = 8.0 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%) Query: 79 KGICAMCGKKILDTKN-YRQS 98 KG+C +CGK++ K+ Y QS Sbjct: 15 KGLCRVCGKRLKKAKSLYAQS 35 >SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 434 Score = 25.4 bits (53), Expect = 8.0 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%) Query: 79 KGICAMCGKKILDTKN-YRQS 98 KG+C +CGK++ K+ Y QS Sbjct: 19 KGLCRVCGKRLKKAKSLYAQS 39 >SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) Length = 362 Score = 25.4 bits (53), Expect = 8.0 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%) Query: 79 KGICAMCGKKILDTKN-YRQS 98 KG+C +CGK++ K+ Y QS Sbjct: 15 KGLCRVCGKRLKKAKSLYAQS 35 >SB_1181| Best HMM Match : DUF1604 (HMM E-Value=0) Length = 1035 Score = 25.4 bits (53), Expect = 8.0 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 24 RNTVESGGRVVGENKALTAKKGRFNPYTSTFQQCKICRTK 63 R T E G+++GE T KK F+ Y S Q +I +K Sbjct: 352 RLTAEERGKILGEEALPTPKKSVFD-YISKEDQSRIKSSK 390 >SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 625 Score = 25.4 bits (53), Expect = 8.0 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%) Query: 79 KGICAMCGKKILDTKN-YRQS 98 KG+C +CGK++ K+ Y QS Sbjct: 15 KGLCRVCGKRLKKAKSLYAQS 35 >SB_43654| Best HMM Match : zf-AD (HMM E-Value=0.2) Length = 284 Score = 25.4 bits (53), Expect = 8.0 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%) Query: 79 KGICAMCGKKILDTKN-YRQS 98 KG+C +CGK++ K+ Y QS Sbjct: 118 KGLCRVCGKRLKKAKSLYAQS 138 >SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15) Length = 846 Score = 25.4 bits (53), Expect = 8.0 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%) Query: 79 KGICAMCGKKILDTKN-YRQS 98 KG+C +CGK++ K+ Y QS Sbjct: 163 KGLCRVCGKRLKKAKSIYAQS 183 Score = 25.4 bits (53), Expect = 8.0 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%) Query: 79 KGICAMCGKKILDTKN-YRQS 98 KG+C +CGK++ K+ Y QS Sbjct: 489 KGLCRVCGKRLKKAKSIYAQS 509 >SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 757 Score = 25.4 bits (53), Expect = 8.0 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%) Query: 79 KGICAMCGKKILDTKN-YRQS 98 KG+C +CGK++ K+ Y QS Sbjct: 166 KGLCRVCGKRLKKAKSLYAQS 186 >SB_20896| Best HMM Match : TSP_1 (HMM E-Value=4.8e-28) Length = 588 Score = 25.4 bits (53), Expect = 8.0 Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 2/29 (6%) Query: 60 CRTKVHQVGSHYCQACAYKKGICAM--CG 86 C G YC+ AY+ G C M CG Sbjct: 360 CNNPRPAYGGKYCEGLAYETGQCGMKSCG 388 >SB_14987| Best HMM Match : TPR_2 (HMM E-Value=0.0065) Length = 1171 Score = 25.4 bits (53), Expect = 8.0 Identities = 14/59 (23%), Positives = 23/59 (38%) Query: 21 AGARNTVESGGRVVGENKALTAKKGRFNPYTSTFQQCKICRTKVHQVGSHYCQACAYKK 79 A + +E+G V A+ A++ Q + HQ+ HY Q YK+ Sbjct: 372 AAINHYIEAGCSVKAIEAAIQARQWNKAVQIVELQDDTVAERYYHQIAHHYAQVQEYKE 430 >SB_8757| Best HMM Match : zf-C2H2 (HMM E-Value=0) Length = 539 Score = 25.4 bits (53), Expect = 8.0 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 57 CKICRTKVHQVGS---HYCQACAYKKGICAMCGKKILDTKNYRQ 97 C IC Q GS HY + K C+ C K+ +++ + R+ Sbjct: 243 CDICHKTFAQAGSLTIHYRRHSNEKHFKCSYCNKRFVESGDMRK 286 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.320 0.132 0.422 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,759,881 Number of Sequences: 59808 Number of extensions: 137660 Number of successful extensions: 385 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 33 Number of HSP's that attempted gapping in prelim test: 374 Number of HSP's gapped (non-prelim): 44 length of query: 100 length of database: 16,821,457 effective HSP length: 71 effective length of query: 29 effective length of database: 12,575,089 effective search space: 364677581 effective search space used: 364677581 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.8 bits) S2: 53 (25.4 bits)
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