GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000112-TA|BGIBMGA000112-PA|undefined
         (100 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    26   0.076
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   2.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   2.9  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    20   6.6  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     19   8.8  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    19   8.8  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    19   8.8  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 26.2 bits (55), Expect = 0.076
 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)

Query: 56  QCKICRTKVHQVGSHYCQAC 75
           +C I + K H+ GSH C+AC
Sbjct: 264 ECPIGKFK-HEAGSHSCEAC 282


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 17  DPWKAGARNTVESGGRVVGENKALTAKKGRFNP 49
           D W+     T+E    V      +T KKG+  P
Sbjct: 76  DRWRDKTFVTIERNNGVPSSLNVVTNKKGKGGP 108


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)

Query: 63  KVHQVGSHYCQAC 75
           KV  +G  YC AC
Sbjct: 534 KVETIGDAYCVAC 546


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
          peptide protein.
          Length = 50

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 7/21 (33%), Positives = 9/21 (42%)

Query: 60 CRTKVHQVGSHYCQACAYKKG 80
          C  K H +  H C+    K G
Sbjct: 30 CNCKRHVIKPHICRKICGKNG 50


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2
          protein.
          Length = 570

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)

Query: 13 VITPDPWKAGARN 25
          V   DPW AG+ N
Sbjct: 52 VFVLDPWFAGSTN 64


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
          protein.
          Length = 104

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)

Query: 75 CAYKKGICAMCGKKI 89
          C   +G C + GKKI
Sbjct: 39 CILDRGHCDVIGKKI 53


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/20 (35%), Positives = 10/20 (50%)

Query: 51  TSTFQQCKICRTKVHQVGSH 70
           T    + +ICR K+H    H
Sbjct: 139 TGILGEKQICRPKIHVFSLH 158


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.132    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,471
Number of Sequences: 429
Number of extensions: 1086
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 100
length of database: 140,377
effective HSP length: 49
effective length of query: 51
effective length of database: 119,356
effective search space:  6087156
effective search space used:  6087156
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.4 bits)
S2: 38 (19.4 bits)