GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000111-TA|BGIBMGA000111-PA|undefined
         (305 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              34   0.006
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           28   0.38 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    27   0.66 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          26   1.5  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    25   2.0  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.7  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   2.7  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   2.7  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   3.5  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   3.5  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     24   4.6  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   8.1  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 33.9 bits (74), Expect = 0.006
 Identities = 25/144 (17%), Positives = 51/144 (35%), Gaps = 5/144 (3%)

Query: 140 ERLQPEHHDHQEPTTITDEHQSQPMSKDDEKPYKNQNDAPIKSERPMDVEHKEQTYQEDA 199
           +R Q + H  +E      + Q Q   +  ++  +NQ     + ++    + +EQ  Q+  
Sbjct: 222 QRQQQQQHQQREQQQ-QQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQQQQQRV 280

Query: 200 NFIGQEQNYEATEMQYQPEYQNNYEEPTXXXXXXXXXXXXXXXXDPNAQYSEEQYNNIAE 259
               Q+QN +    Q Q + Q   ++                      Q ++ Q      
Sbjct: 281 ----QQQNQQHQRQQQQQQQQRQQQQQQEQQELWTTVVRRRQNTQQQQQSNQPQQQQQQT 336

Query: 260 VNYQPEQNYEQSYENTAEAPQEQY 283
             YQP Q  +Q  +   +   ++Y
Sbjct: 337 GRYQPPQMRQQLQQQQQQRQPQRY 360



 Score = 28.7 bits (61), Expect = 0.22
 Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 3/94 (3%)

Query: 133 HTDRTDRERLQPEHHDH-QEPTTITDEHQSQPMSKDDEKPYKNQNDAPIKSERPMDVEHK 191
           H+ R  R R  P+  +  Q+        Q Q   +  ++  + Q       +R    + +
Sbjct: 206 HSSRNRRGRQGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQQ 265

Query: 192 EQTYQEDANFIGQEQNYEATEMQYQPEYQNNYEE 225
           +Q +Q+      Q+Q  +    Q+Q + Q   ++
Sbjct: 266 QQQHQQREQ--QQQQRVQQQNQQHQRQQQQQQQQ 297



 Score = 23.8 bits (49), Expect = 6.1
 Identities = 16/92 (17%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 135 DRTDRERLQPEHHDHQEPTTITDEHQSQPMSKDDEKPYKNQNDAPIKSERPMDVEHKEQT 194
           ++  ++R+Q ++  HQ       + Q Q   +  ++  + Q        R  + + ++Q+
Sbjct: 273 EQQQQQRVQQQNQQHQR------QQQQQQQQRQQQQQQEQQELWTTVVRRRQNTQQQQQS 326

Query: 195 YQEDANFIGQEQNYEATEMQYQPEYQNNYEEP 226
            Q       Q   Y+  +M+ Q + Q    +P
Sbjct: 327 NQPQQQ-QQQTGRYQPPQMRQQLQQQQQQRQP 357


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 27.9 bits (59), Expect = 0.38
 Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 2/92 (2%)

Query: 203 GQEQNYEATEMQYQPEYQNNYEEPTX-XXXXXXXXXXXXXXXDPNAQYSEEQYNNIAEVN 261
           GQ Q  ++   QYQP+ Q   ++                     +A +S     N  + +
Sbjct: 398 GQAQPSQSAAQQYQPQQQQQQQQQQQPQSQQQQQQQQQQQQQSGSATWSGSNTLNYTQ-S 456

Query: 262 YQPEQNYEQSYENTAEAPQEQYYPESNDTNPS 293
            QP  +   S++  A   Q QY+P  +  + S
Sbjct: 457 IQPPAHASGSHQQQASQQQSQYWPHGSGGSSS 488



 Score = 23.8 bits (49), Expect = 6.1
 Identities = 10/45 (22%), Positives = 19/45 (42%)

Query: 251 EEQYNNIAEVNYQPEQNYEQSYENTAEAPQEQYYPESNDTNPSDA 295
           + Q +  A   YQP+Q  +Q  +   ++ Q+Q   +        A
Sbjct: 399 QAQPSQSAAQQYQPQQQQQQQQQQQPQSQQQQQQQQQQQQQSGSA 443


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 27.1 bits (57), Expect = 0.66
 Identities = 24/171 (14%), Positives = 64/171 (37%), Gaps = 5/171 (2%)

Query: 136 RTDRERLQPEHHDHQEPTTITDEHQSQPMSKDDEKPYKNQNDAPIKSERPMDVEHKEQTY 195
           R  ++R + +    Q+      E    P  +   +  ++Q     + ++    + ++Q  
Sbjct: 273 RQQQQRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQ 332

Query: 196 QEDANFIGQEQNYEATEMQ--YQPEYQNNYEEPTXXXXXXXXXXXXXXXXDPNAQYSEEQ 253
           Q+      Q+Q  +  + Q   Q + Q  +++                   P+ + ++ Q
Sbjct: 333 QQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQQPRQSLPHRKQTQLQ 392

Query: 254 YNNIAEVNYQPEQNYEQSYENTAEAPQEQYYPESNDTNPSDAPTKMAEEHQ 304
            +   +   Q +Q  +QS +   + PQ+  +     + PS    ++ ++ Q
Sbjct: 393 LSPRLQ---QQQQQQQQSQQQQQQQPQQLLWTTVVRSCPSQRQRQLQQQQQ 440



 Score = 27.1 bits (57), Expect = 0.66
 Identities = 22/147 (14%), Positives = 52/147 (35%), Gaps = 1/147 (0%)

Query: 136 RTDRERLQPEHHDHQEPTTITDEHQSQPMSKDDEKPYKNQNDAPIKSERPMDVEHKEQTY 195
           R  ++R Q +    Q+      + Q Q   +  ++  + Q     + +    + H++QT 
Sbjct: 331 RQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQQPRQSLPHRKQTQ 390

Query: 196 QEDANFIGQEQNYEATEMQYQPEYQNNYEEPTXXXXXXXXXXXXXXXXDPNAQYSEEQYN 255
            + +  + Q+Q  +  + Q Q + Q      T                    Q  ++Q  
Sbjct: 391 LQLSPRL-QQQQQQQQQSQQQQQQQPQQLLWTTVVRSCPSQRQRQLQQQQQQQQQQQQGE 449

Query: 256 NIAEVNYQPEQNYEQSYENTAEAPQEQ 282
                  + ++  +Q  +   + PQ+Q
Sbjct: 450 RYVPPQLRQQRQQQQPQQQQQQRPQQQ 476


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 3/96 (3%)

Query: 128 PGDTGHTDRTDRERLQPEHHDHQEPTTITDEHQSQPMSKDDEKPYKNQNDAPIKSERPMD 187
           PG  G+  +  +++ Q +HH HQ+       + +  +   D++  + Q    + S     
Sbjct: 120 PG-MGYQQQQQQQQQQQQHHQHQQLQQQQHHYYTPQLLNLDQEQLQTQTFTYVTSSNEA- 177

Query: 188 VEHKEQTYQEDANFIGQEQNYEATEMQYQPEYQNNY 223
               E  Y E  + +  EQ  +    +YQ E    +
Sbjct: 178 FAAPEPNYSE-PHLVILEQPVDKFRFRYQSEMHGTH 212


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 5/74 (6%)

Query: 95  VDFVAHPTHYTPADRSVPFIASSPGHDDPGDQSPGDTGHTDRTD-----RERLQPEHHDH 149
           VD  + PT    +D  +  + SS  H   G  S      TD  +     +++ Q  HH H
Sbjct: 257 VDPSSSPTPSFGSDHGIGGVTSSSVHLHTGGHSTVLGSATDNNNYILAQQQQQQHHHHQH 316

Query: 150 QEPTTITDEHQSQP 163
           Q       ++ S P
Sbjct: 317 QPQQQHQQQYHSHP 330



 Score = 24.2 bits (50), Expect = 4.6
 Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 247 AQYSEEQYNNIAEVNYQPEQNYEQSYENTAEAPQEQYYPESNDTNPSD 294
           AQ  ++Q+++     +QP+Q ++Q Y +       Q+  E +D    D
Sbjct: 304 AQQQQQQHHHH---QHQPQQQHQQQYHSHPHHTPVQFKTELHDNTQYD 348


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 13/83 (15%), Positives = 32/83 (38%)

Query: 115 ASSPGHDDPGDQSPGDTGHTDRTDRERLQPEHHDHQEPTTITDEHQSQPMSKDDEKPYKN 174
           ASS   ++  + S  +  +T  ++       HH       +T+  Q + + +  ++   +
Sbjct: 195 ASSNNSNNNNNSSSNNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLERLQQQQQQQTHH 254

Query: 175 QNDAPIKSERPMDVEHKEQTYQE 197
           Q      S +    +H    +Q+
Sbjct: 255 QQQQHPSSHQQQSQQHPSSQHQQ 277


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 13/83 (15%), Positives = 32/83 (38%)

Query: 115 ASSPGHDDPGDQSPGDTGHTDRTDRERLQPEHHDHQEPTTITDEHQSQPMSKDDEKPYKN 174
           ASS   ++  + S  +  +T  ++       HH       +T+  Q + + +  ++   +
Sbjct: 195 ASSNNSNNNNNSSSNNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLERLQQQQQQQTHH 254

Query: 175 QNDAPIKSERPMDVEHKEQTYQE 197
           Q      S +    +H    +Q+
Sbjct: 255 QQQQHPSSHQQQSQQHPSSQHQQ 277


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 13/83 (15%), Positives = 32/83 (38%)

Query: 115 ASSPGHDDPGDQSPGDTGHTDRTDRERLQPEHHDHQEPTTITDEHQSQPMSKDDEKPYKN 174
           ASS   ++  + S  +  +T  ++       HH       +T+  Q + + +  ++   +
Sbjct: 147 ASSNNSNNNNNSSSNNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLERLQQQQQQQTHH 206

Query: 175 QNDAPIKSERPMDVEHKEQTYQE 197
           Q      S +    +H    +Q+
Sbjct: 207 QQQQHPSSHQQQSQQHPSSQHQQ 229


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 13/83 (15%), Positives = 32/83 (38%)

Query: 115 ASSPGHDDPGDQSPGDTGHTDRTDRERLQPEHHDHQEPTTITDEHQSQPMSKDDEKPYKN 174
           ASS   ++  + S  +  +T  ++       HH       +T+  Q + + +  ++   +
Sbjct: 195 ASSNNSNNNNNSSGNNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLERLQQQQQQQTHH 254

Query: 175 QNDAPIKSERPMDVEHKEQTYQE 197
           Q      S +    +H    +Q+
Sbjct: 255 QQQQHPSSHQQQSQQHPSSQHQQ 277


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query: 8   WCSHKRYCTTTVARSSTPL 26
           W SH  YCTT   R++  L
Sbjct: 764 WKSHVEYCTTKALRTAKAL 782


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 16/56 (28%), Positives = 20/56 (35%), Gaps = 2/56 (3%)

Query: 211 TEMQYQPE-YQNNYEEPTXXXXXXXXXXXXXXXXDPNAQYSEEQYNNIAEVNYQPE 265
           TE  +QP  Y   YE P                  P+ Q S E YN+    +Y  E
Sbjct: 183 TEANFQPHPYYPKYE-PDAYITASTERSRGVTGDQPSLQSSYESYNSSGLRSYSSE 237


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)

Query: 279 PQEQYYPESNDTNPSDAPTKMA 300
           PQ+Q +P   DT P+  P  ++
Sbjct: 140 PQQQQHPHQRDTGPALFPAPIS 161


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.308    0.125    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 346,320
Number of Sequences: 2123
Number of extensions: 14836
Number of successful extensions: 43
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 23
length of query: 305
length of database: 516,269
effective HSP length: 64
effective length of query: 241
effective length of database: 380,397
effective search space: 91675677
effective search space used: 91675677
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 48 (23.4 bits)