Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000110-TA|BGIBMGA000110-PA|IPR009053|Prefoldin,
IPR010978|tRNA-binding arm
(757 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 30 0.080
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 28 0.24
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 26 1.3
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 1.7
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 1.7
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 1.7
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 25 1.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 24 5.3
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 23 9.2
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 23 9.2
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 29.9 bits (64), Expect = 0.080
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 643 ETVEVIDGTPNIEASRSENDVEDDR--SHLSPISIKVTSPKANTDELENIVLDKTEDARD 700
E V +D +P+ + R ND DR S +P+SI + ++ LD++ R+
Sbjct: 1370 ERVPTVDLSPS-PSDRGRNDDGSDRLTSPPTPLSISRAGSRDEDSTRDSTKLDRSSRERE 1428
Query: 701 STDGDPNEDVDETNL 715
+G ED D L
Sbjct: 1429 VHNGGQQEDRDRKTL 1443
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 28.3 bits (60), Expect = 0.24
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 532 KETRTSRRRSGKESDSSCKHQPIIVGPLTTNQDLADADGERTYNLPLMIQQPFLREKKEP 591
+ET R R KE + S +P I+ L+ N ++ + YN L + + ++ P
Sbjct: 60 RETSKERSRDRKERERS--KEPKIISSLSNNYKYSNYNNYNNYNKKLYYKNYIINIEQIP 117
Query: 592 IKVDI 596
+ V I
Sbjct: 118 VPVPI 122
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 25.8 bits (54), Expect = 1.3
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 660 ENDVEDDRSHLSPISI-KVTSPKANTDELENIVLDKTEDARDS 701
E +V+D ++ P + + T AN D+ N V+ ++++ARD+
Sbjct: 973 ELEVKDQKNGKPPSVVSRSTQTSANNDKDTNAVVTQSKEARDN 1015
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.4 bits (53), Expect = 1.7
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 225 LTQSKIDLKKLQD--ENNENKRKLASGLVDSTCLDGFKRQIDNLQRDKSTLEAQISKLKL 282
L + + L + +D E+ ++ +++ L+ ST D KR + +Q TL +S L L
Sbjct: 41 LALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYD--KRLLPPVQ---GTLTVNVSVLLL 95
Query: 283 SLEQREDDSGRYRRTEVVEQQ 303
SL ++ S +Y +++QQ
Sbjct: 96 SLASPDESSLKYEVEFLLQQQ 116
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 25.4 bits (53), Expect = 1.7
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 225 LTQSKIDLKKLQD--ENNENKRKLASGLVDSTCLDGFKRQIDNLQRDKSTLEAQISKLKL 282
L + + L + +D E+ ++ +++ L+ ST D KR + +Q TL +S L L
Sbjct: 41 LALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYD--KRLLPPVQ---GTLTVNVSVLLL 95
Query: 283 SLEQREDDSGRYRRTEVVEQQ 303
SL ++ S +Y +++QQ
Sbjct: 96 SLASPDESSLKYEVEFLLQQQ 116
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 25.4 bits (53), Expect = 1.7
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 225 LTQSKIDLKKLQD--ENNENKRKLASGLVDSTCLDGFKRQIDNLQRDKSTLEAQISKLKL 282
L + + L + +D E+ ++ +++ L+ ST D KR + +Q TL +S L L
Sbjct: 41 LALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYD--KRLLPPVQ---GTLTVNVSVLLL 95
Query: 283 SLEQREDDSGRYRRTEVVEQQ 303
SL ++ S +Y +++QQ
Sbjct: 96 SLASPDESSLKYEVEFLLQQQ 116
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 25.4 bits (53), Expect = 1.7
Identities = 12/50 (24%), Positives = 27/50 (54%)
Query: 391 HQRQTKHETNRLNSEIQSLRQRLDRADADLVHSRRENLRLSEQISNLEKE 440
H++ +K+E R E R+R R +D V S+++ + +Q + +++
Sbjct: 56 HRQHSKNEQQRKEMEQMREREREQREHSDRVTSQQQQQQQQQQQQDQQQQ 105
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.8 bits (49), Expect = 5.3
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 532 KETRTSRRRSGKESDSSCKHQPIIVGPLTTNQDLADADGERTYN 575
+ET R R KE + S +P I+ L+ N ++ + YN
Sbjct: 293 RETSKERSRDRKERERS--KEPKIISSLSNNYKYSNYNNYNNYN 334
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.0 bits (47), Expect = 9.2
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 205 TRLEGPNIVFESRIAELEAQLTQSKI 230
T GP +V IAELE + K+
Sbjct: 181 TNTSGPGVVSNPMIAELETLSVEPKV 206
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.0 bits (47), Expect = 9.2
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 205 TRLEGPNIVFESRIAELEAQLTQSKI 230
T GP +V IAELE + K+
Sbjct: 181 TNTSGPGVVSNPMIAELETLSVEPKV 206
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.308 0.127 0.337
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,058
Number of Sequences: 429
Number of extensions: 8658
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 10
length of query: 757
length of database: 140,377
effective HSP length: 63
effective length of query: 694
effective length of database: 113,350
effective search space: 78664900
effective search space used: 78664900
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 47 (23.0 bits)
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