Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000109-TA|BGIBMGA000109-PA|IPR000219|DH
(1676 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 29 0.24
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 29 0.24
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 29 0.24
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 29 0.24
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 29 0.24
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 29 0.24
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 29 0.24
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 29 0.24
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 29 0.24
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 29 0.32
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 29 0.32
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 29 0.32
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 29 0.32
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 29 0.42
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 27 0.98
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 27 1.7
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 27 1.7
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 25 5.2
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 25 5.2
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 25 6.9
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 25 6.9
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 25 6.9
DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. 24 9.1
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 9.1
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 29.5 bits (63), Expect = 0.24
Identities = 24/116 (20%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 711 RNSAQR-RHQRLLKSHSNPEPVVLARQLDNEDNKFKLVKQNSERNDTKIDEDDAISQQIP 769
RN R +++R K H+ E ++ R N ++ + +QNS +N+ + + S++
Sbjct: 8 RNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKE-R 66
Query: 770 EPDQVETKEIEEDHIYETLRID---SRFEDALHNVDNKSKSIHHQHLNRQKRLPSP 822
D+ E + +E I +L + S + + +N + K + + ++ +++P P
Sbjct: 67 SRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVP 122
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 29.5 bits (63), Expect = 0.24
Identities = 24/116 (20%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 711 RNSAQR-RHQRLLKSHSNPEPVVLARQLDNEDNKFKLVKQNSERNDTKIDEDDAISQQIP 769
RN R +++R K H+ E ++ R N ++ + +QNS +N+ + + S++
Sbjct: 8 RNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKE-R 66
Query: 770 EPDQVETKEIEEDHIYETLRID---SRFEDALHNVDNKSKSIHHQHLNRQKRLPSP 822
D+ E + +E I +L + S + + +N + K + + ++ +++P P
Sbjct: 67 SRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVP 122
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 29.5 bits (63), Expect = 0.24
Identities = 24/116 (20%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 711 RNSAQR-RHQRLLKSHSNPEPVVLARQLDNEDNKFKLVKQNSERNDTKIDEDDAISQQIP 769
RN R +++R K H+ E ++ R N ++ + +QNS +N+ + + S++
Sbjct: 8 RNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKE-R 66
Query: 770 EPDQVETKEIEEDHIYETLRID---SRFEDALHNVDNKSKSIHHQHLNRQKRLPSP 822
D+ E + +E I +L + S + + +N + K + + ++ +++P P
Sbjct: 67 SRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVP 122
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 29.5 bits (63), Expect = 0.24
Identities = 24/116 (20%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 711 RNSAQR-RHQRLLKSHSNPEPVVLARQLDNEDNKFKLVKQNSERNDTKIDEDDAISQQIP 769
RN R +++R K H+ E ++ R N ++ + +QNS +N+ + + S++
Sbjct: 8 RNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKE-R 66
Query: 770 EPDQVETKEIEEDHIYETLRID---SRFEDALHNVDNKSKSIHHQHLNRQKRLPSP 822
D+ E + +E I +L + S + + +N + K + + ++ +++P P
Sbjct: 67 SRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVP 122
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 29.5 bits (63), Expect = 0.24
Identities = 24/116 (20%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 711 RNSAQR-RHQRLLKSHSNPEPVVLARQLDNEDNKFKLVKQNSERNDTKIDEDDAISQQIP 769
RN R +++R K H+ E ++ R N ++ + +QNS +N+ + + S++
Sbjct: 8 RNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKE-R 66
Query: 770 EPDQVETKEIEEDHIYETLRID---SRFEDALHNVDNKSKSIHHQHLNRQKRLPSP 822
D+ E + +E I +L + S + + +N + K + + ++ +++P P
Sbjct: 67 SRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVP 122
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 29.5 bits (63), Expect = 0.24
Identities = 24/116 (20%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 711 RNSAQR-RHQRLLKSHSNPEPVVLARQLDNEDNKFKLVKQNSERNDTKIDEDDAISQQIP 769
RN R +++R K H+ E ++ R N ++ + +QNS +N+ + + S++
Sbjct: 8 RNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKE-R 66
Query: 770 EPDQVETKEIEEDHIYETLRID---SRFEDALHNVDNKSKSIHHQHLNRQKRLPSP 822
D+ E + +E I +L + S + + +N + K + + ++ +++P P
Sbjct: 67 SRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVP 122
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 29.5 bits (63), Expect = 0.24
Identities = 24/116 (20%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 711 RNSAQR-RHQRLLKSHSNPEPVVLARQLDNEDNKFKLVKQNSERNDTKIDEDDAISQQIP 769
RN R +++R K H+ E ++ R N ++ + +QNS +N+ + + S++
Sbjct: 8 RNREYREKNRRYEKLHNEKEKLLEERTSRNRYSRSREREQNSYKNEREYQKYRETSKE-R 66
Query: 770 EPDQVETKEIEEDHIYETLRID---SRFEDALHNVDNKSKSIHHQHLNRQKRLPSP 822
D+ E + +E I +L + S + + +N + K + + ++ +++P P
Sbjct: 67 SRDRTERERCKEPKIISSLSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVP 122
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 29.5 bits (63), Expect = 0.24
Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 711 RNSAQRRHQRLLKSHSNPEPVVLARQLDNEDNKFKLVKQNSERNDTKIDEDDAISQQIPE 770
RN R+ +R K H+ E ++ R +++ + +QNS +N+ + + S++
Sbjct: 8 RNREYRKDRRYEKLHNEKEKLLEERTNRKRNSRSREREQNSYKNEREYRKYRETSKE-RS 66
Query: 771 PDQVETKEIEEDHIYETLRIDS--------RFEDALHNVDNKSKSIHHQHLNRQKRLPSP 822
D+ E + E I +L ++ + + +N +N +K +++ +N + ++P P
Sbjct: 67 RDRTERERSREPKIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNIINIE-QIPVP 125
Query: 823 -PAPV 826
P PV
Sbjct: 126 VPVPV 130
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 29.5 bits (63), Expect = 0.24
Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 711 RNSAQRRHQRLLKSHSNPEPVVLARQLDNEDNKFKLVKQNSERNDTKIDEDDAISQQIPE 770
RN R+ +R K H+ E ++ R +++ + +QNS +N+ + + S++
Sbjct: 8 RNREYRKDRRYEKLHNEKEKLLEERTNRKRNSRSREREQNSYKNEREYRKYRETSKE-RS 66
Query: 771 PDQVETKEIEEDHIYETLRIDS--------RFEDALHNVDNKSKSIHHQHLNRQKRLPSP 822
D+ E + E I +L ++ + + +N +N +K +++ +N + ++P P
Sbjct: 67 RDRAERERSREPKIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNIINIE-QIPVP 125
Query: 823 -PAPV 826
P PV
Sbjct: 126 VPVPV 130
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 29.1 bits (62), Expect = 0.32
Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 711 RNSAQR-RHQRLLKSHSNPEPVVLARQLDNEDNKFKLVKQNSERNDTKIDEDDAISQQIP 769
RN R + +R K H+ E ++ R ++ + ++ S +N+ + S++
Sbjct: 8 RNREYREKDRRYEKLHNEKEKLLEERTSRKRYSRSREREKKSYKNENSYRKYRETSKERS 67
Query: 770 EPDQVETKEIEEDHIYETLRIDSRFEDALHNVDNKSKSIHHQHLNRQKRLPSP-PAPV 826
D+ E + +E I I S +HN +N K + + ++N +++P P P PV
Sbjct: 68 R-DRKERERSKEPKI-----ISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVPVPV 119
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 29.1 bits (62), Expect = 0.32
Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 711 RNSAQR-RHQRLLKSHSNPEPVVLARQLDNEDNKFKLVKQNSERNDTKIDEDDAISQQIP 769
RN R + +R K H+ E ++ R ++ + ++ S +N+ + S++
Sbjct: 8 RNREYREKDRRYEKLHNEKEKLLEERTSRKRYSRSREREKKSYKNENSYRKYRETSKERS 67
Query: 770 EPDQVETKEIEEDHIYETLRIDSRFEDALHNVDNKSKSIHHQHLNRQKRLPSP-PAPV 826
D+ E + +E I I S +HN +N K + + ++N +++P P P PV
Sbjct: 68 R-DRKERERSKEPKI-----ISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVPVPV 119
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 29.1 bits (62), Expect = 0.32
Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 711 RNSAQR-RHQRLLKSHSNPEPVVLARQLDNEDNKFKLVKQNSERNDTKIDEDDAISQQIP 769
RN R + +R K H+ E ++ R ++ + ++ S +N+ + S++
Sbjct: 8 RNREYREKDRRYEKLHNEKEKLLEERTSRKRYSRSREREKKSYKNENSYRKYRETSKERS 67
Query: 770 EPDQVETKEIEEDHIYETLRIDSRFEDALHNVDNKSKSIHHQHLNRQKRLPSP-PAPV 826
D+ E + +E I I S +HN +N K + + ++N +++P P P PV
Sbjct: 68 R-DRKERERSKEPKI-----ISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVPVPV 119
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 29.1 bits (62), Expect = 0.32
Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 711 RNSAQR-RHQRLLKSHSNPEPVVLARQLDNEDNKFKLVKQNSERNDTKIDEDDAISQQIP 769
RN R + +R K H+ E ++ R ++ + ++ S +N+ + S++
Sbjct: 241 RNREYREKDRRYEKLHNEKEKLLEERTSRKRYSRSREREKKSYKNENSYRKYRETSKERS 300
Query: 770 EPDQVETKEIEEDHIYETLRIDSRFEDALHNVDNKSKSIHHQHLNRQKRLPSP-PAPV 826
D+ E + +E I I S +HN +N K + + ++N +++P P P PV
Sbjct: 301 R-DRKERERSKEPKI-----ISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVPVPV 352
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 28.7 bits (61), Expect = 0.42
Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 711 RNSAQR-RHQRLLKSHSNPEPVVLARQLDNEDNKFKLVKQNSERNDTKIDEDDAISQQIP 769
RN R + +R K H+ E ++ R ++ + ++ S +N+ + S++
Sbjct: 8 RNREYREKDRRYEKLHNEKEKLLEERTSRKRYSRSREREKKSYKNENSYRKYRETSKERS 67
Query: 770 EPDQVETKEIEEDHIYETLRIDSRFEDALHNVDNKSKSIHHQHLNRQKRLPSP-PAPV 826
D+ E + +E I I S +HN +N K + + ++N +++P P P PV
Sbjct: 68 R-DRKERERSKEPKI-----ISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVPVPIPV 119
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 27.5 bits (58), Expect = 0.98
Identities = 27/124 (21%), Positives = 54/124 (43%), Gaps = 7/124 (5%)
Query: 611 EPPVVTERLSKDEDIDEETYKKLIEKTDSFKKNELEKVKYLNKQKVINESSEVDEKTCDE 670
+P V + S + ++ K L + S +L V+ L QK + ++ T
Sbjct: 1092 KPIAVQIQQSPHQQQQQQQQKILAKVLTSSNSGQLISVENLLAQKGLKLAT-----TASH 1146
Query: 671 TKQDVVVESGEETEQPLEQIISQLLLQNREFQKLIKKQQLRNSAQRRHQRLLKSHSNPEP 730
Q + G++ Q Q++SQ + + + + QQ + S Q + R++ + +P
Sbjct: 1147 ANQ--LNRQGKQVIQTQYQVVSQAQTSSGQSKIIASTQQQQQSQQAQTVRMVTAQLAGKP 1204
Query: 731 VVLA 734
+VLA
Sbjct: 1205 IVLA 1208
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 26.6 bits (56), Expect = 1.7
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 9/124 (7%)
Query: 695 LLQNREFQKLIKKQQLRNSAQRRHQRLLKSHSNPEPVVLARQLDNEDNKFKLVKQNSERN 754
L Q + + ++ R S+ +R S +P P +L Q + NK K +N
Sbjct: 11 LSQRKIIRSRSRRYSKRFSSSIVDRRSPSSSRSPSPSLLTSQPHQDHNKEK------SKN 64
Query: 755 DTKIDEDDAISQQIPEPDQVETKEIEEDHIYETLRIDSRFEDALHNVDNKSKSIHHQHLN 814
+ ++D Q+ E + +KE+ D E +D R + L +NK KS
Sbjct: 65 NHHCNQDTEKLNQL-EIESDNSKEV-NDKKEENFIVD-RLRNDLFECENKEKSNVCLKFE 121
Query: 815 RQKR 818
QKR
Sbjct: 122 EQKR 125
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 26.6 bits (56), Expect = 1.7
Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 1347 SYVTTSSDGIHQSGKSNSTDVNLDKPKVPYDTIQDNSDEC 1386
++++ + H +G S + N D P+VPY T+++ C
Sbjct: 118 NHMSGDRNDAHGTGNSRANTYNFDYPQVPY-TVKNFHPRC 156
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 25.0 bits (52), Expect = 5.2
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 1402 DVFRDSAVYSDQEEVDEAKSEPWIKDKKPINKIITRV--ESVQRKSSLQRINLTK 1454
D+FR S ++ ++ SE +K+ K I + I + ES+QRKS + ++++K
Sbjct: 419 DIFRVSCA-TEHSQLTNI-SEEVLKEAKIIQEEIRTLLDESIQRKSDITELDVSK 471
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 25.0 bits (52), Expect = 5.2
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 1402 DVFRDSAVYSDQEEVDEAKSEPWIKDKKPINKIITRV--ESVQRKSSLQRINLTK 1454
D+FR S ++ ++ SE +K+ K I + I + ES+QRKS + ++++K
Sbjct: 125 DIFRVSCA-TEHSQLTNI-SEEVLKEAKIIQEEIRTLLDESIQRKSDITELDVSK 177
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 24.6 bits (51), Expect = 6.9
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 1013 DILKFNKNAKTETEYAQDISQSTLELEEEIDRCYKNNFEDITLDKTE 1059
++ K+ KN E +++ ++L++E + K N D + KTE
Sbjct: 236 NLTKYGKNQIKLLEIIHGLTKKVIQLKKEEYKSGKRNIIDNSAQKTE 282
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 24.6 bits (51), Expect = 6.9
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 573 DTTARFYADLSADASTENILHISESNDSLNVDKSDDK 609
+TT F DLS D ST + +S++ L K D K
Sbjct: 342 NTTMVFCNDLSIDRSTNTMYVLSDNFQQLLFSKYDAK 378
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 24.6 bits (51), Expect = 6.9
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 698 NREFQKLIKKQQLRNSAQRRHQRLLKSHSNPEPVVLARQLDNEDNKFKLVKQNSE 752
+ E +KL++++ R R +R KS+ N R+ E ++ K ++ S+
Sbjct: 261 HNEKEKLLEERTSRKRYSRSREREQKSYKNENSYRKYRETSKERSRDKTERERSK 315
>DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein.
Length = 132
Score = 24.2 bits (50), Expect = 9.1
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 619 LSKDEDIDEETYKKLIEKTDSFKKNELEKVKYLNKQKVINESSEVDEKTCDETKQ 673
L K +D+ + + K EK + L+KV ++N NE + T +++Q
Sbjct: 41 LKKADDVKKGIFDKNDEKLACYVDCMLKKVGFVNADTTFNEEKFRERTTKLDSEQ 95
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 24.2 bits (50), Expect = 9.1
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 320 RKNDENDSNG--DKCSDCDALQSTDAGSSEHLERRPYKRTDFNSSQESFVKENLNKAREY 377
RK +ND G D+ D + + D E+R D + + +E +REY
Sbjct: 267 RKRRQNDGEGADDRDDDEENEEEEDGRGQSEAEKRLKLDEDADGAVSPLRREKDRGSREY 326
Query: 378 HSTN 381
++N
Sbjct: 327 PTSN 330
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.310 0.127 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 457,499
Number of Sequences: 429
Number of extensions: 20037
Number of successful extensions: 101
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 80
Number of HSP's gapped (non-prelim): 33
length of query: 1676
length of database: 140,377
effective HSP length: 67
effective length of query: 1609
effective length of database: 111,634
effective search space: 179619106
effective search space used: 179619106
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 50 (24.2 bits)
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