Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000108-TA|BGIBMGA000108-PA|undefined
(420 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.14
SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2) 35 0.14
SB_31362| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.19
SB_7791| Best HMM Match : SSDP (HMM E-Value=0.41) 34 0.25
SB_4908| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.25
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 33 0.33
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 33 0.33
SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17) 33 0.33
SB_45977| Best HMM Match : MBT (HMM E-Value=0) 33 0.57
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 33 0.57
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 32 0.76
SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028) 32 1.0
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 31 1.8
SB_45513| Best HMM Match : COXG (HMM E-Value=1.3) 31 2.3
SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0) 31 2.3
SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28) 30 3.1
SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_24101| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.0
SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046) 30 4.0
SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_32293| Best HMM Match : BRCA2 (HMM E-Value=0) 29 5.3
SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_21130| Best HMM Match : Smg4_UPF3 (HMM E-Value=1.5) 29 5.3
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 29 7.1
SB_17079| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_58507| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_51436| Best HMM Match : Neuromodulin (HMM E-Value=6.2) 29 7.1
SB_3979| Best HMM Match : Syndecan (HMM E-Value=0.0017) 29 7.1
SB_605| Best HMM Match : Calx-beta (HMM E-Value=0) 29 7.1
SB_20117| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.3
SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032) 29 9.3
SB_2603| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.3
>SB_29018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1047
Score = 34.7 bits (76), Expect = 0.14
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 19/149 (12%)
Query: 183 DSVEIYDQPCLNKAKIEESVKPETKVEAEETYDVPMNNRPAIYDVPSNNKTA-------- 234
D+++ D A ES+ PE+ + E + P +P +P N KTA
Sbjct: 806 DTMQPRDAKHPEPAATPESMGPESIIINTEHHHTPAKVKPRA--LPPNWKTATDPQGKIY 863
Query: 235 -FETLSLPFIDQSIELSITTNDREF--DIKLSSKETSP--MKSNPKT-STPEGSPAKVPK 288
+ TL+ I + R+F D+++ S + P K PKT STP GSP + P
Sbjct: 864 YYHTLTRRTQWDPPTPEIVVSPRKFTTDMEMDSGDEEPPLKKKKPKTPSTPPGSPPRSPT 923
Query: 289 LSQV---GTNSLHRKDFLSPPKQLSETGP 314
L+ + ++ + LSPP Q + P
Sbjct: 924 LAYTTAPADTTENQCNILSPPGQHTHGEP 952
>SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2)
Length = 1716
Score = 34.7 bits (76), Expect = 0.14
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Query: 215 DVPMNNRPAIYDVPSNNKTAFETLSLPFIDQSIELSITTNDREFDIKLSSKETSPMKSN- 273
DV P IY N+K S + SIE + T+ E D+KL K+ K
Sbjct: 1059 DVGRRPEPGIYG--QNSKADTRRYSETHMGHSIENTFVTSAGELDLKLEIKKPETKKPEY 1116
Query: 274 --PKTSTPEGSPAKVPKLSQVGTNSL 297
+ ++P SP KV +L+ T S+
Sbjct: 1117 EVREMTSPRNSPFKVIELTDKSTGSI 1142
>SB_31362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 324
Score = 34.3 bits (75), Expect = 0.19
Identities = 18/76 (23%), Positives = 35/76 (46%)
Query: 254 NDREFDIKLSSKETSPMKSNPKTSTPEGSPAKVPKLSQVGTNSLHRKDFLSPPKQLSETG 313
N+ + K ++ ++P +NP ++ +P+ PK + +N +P +
Sbjct: 182 NNPSSNPKPNNPSSNPKPNNPSSNPKSNNPSSNPKPNNPSSNPKPNNPSSNPKSNNPSSN 241
Query: 314 PYPDVVGSTGNLKSCS 329
P P+ G+ N KSCS
Sbjct: 242 PKPNNPGTYLNRKSCS 257
>SB_7791| Best HMM Match : SSDP (HMM E-Value=0.41)
Length = 901
Score = 33.9 bits (74), Expect = 0.25
Identities = 43/198 (21%), Positives = 74/198 (37%), Gaps = 11/198 (5%)
Query: 118 DPKHEPTFDSLSPNVKRIISSATEASALKFQKITTNAARSSTRLRSNIPLVGATSKITQS 177
D ++PT DSL PN+ + + + L Q T SS R+ S + QS
Sbjct: 123 DVMYQPTLDSLQPNLDEFVEHISSLADLIQQDETFT---SSPRMASQRFSAEDINYQQQS 179
Query: 178 GLEILDSVEIYDQPCLNKAKIEESVKPETKVE---AEETYDVPMNNRPAIYDVPSNNKTA 234
LE+++ Y C + + VE E+ +P P + V N++
Sbjct: 180 HLEVMEHSTDYPTSCRQEYMDTSGSYNDYSVEYQDMEQPESLPEEPLPQL--VEENSQEM 237
Query: 235 FETLSLPFIDQ-SIELSITTNDREFDIKLSSKETSPMKSNPKTSTPEGSPAKVPKLSQVG 293
+ +Q + + + +S SP++ +P +P K S V
Sbjct: 238 YSPQPQESFEQLTSPVQSPLGSSLHGVPPNSVPQSPVQRSPSAMSPPSLGTSQYKASSVT 297
Query: 294 TNSLHRKDFLSPPKQLSE 311
T HR+ F + LS+
Sbjct: 298 TQ--HRQSFTTGSSMLSQ 313
>SB_4908| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1014
Score = 33.9 bits (74), Expect = 0.25
Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 18/212 (8%)
Query: 27 PEVNSETAKDARNDPPVESEPD-----SVTVDSDLQRKDLDMSTGSVKLPIATINKSS-- 79
P + E KD PV S S TV+ + K ++ K+ K +
Sbjct: 502 PSGSGEVDKDRSEKQPVVSTVSTNAAASETVEDTKETKSKPLAKIDHKIEDKLSQKKTAK 561
Query: 80 LYTLRGKSDKIGAIDTDKCDRAISETVLIKDKPQRTLKDPKHEPTFDSLSPNVKRIISSA 139
+ + G DK + + + ISE + K + ++D +E L P +K S
Sbjct: 562 IVSTSGADDKQASSSSGSGE--ISEGNVYSLKGEHEIEDAVYEEGI-LLKPTMKVKASPQ 618
Query: 140 TEASALKFQKITTNAARSSTRLRSNIPLVGATSKITQSGLEILDSVEIYDQPCLNKAKIE 199
E + +K+ +++ + + + K Q ++ ++++ Q KAK E
Sbjct: 619 EEKNETGVKKVHKKTGKAAKASKKQAKMDKPSKKTKQGSVKTKPAIKVRPQ----KAKDE 674
Query: 200 ESVKPETKVEAEETYDVPMNNRPAIYDVPSNN 231
+ VK E+K +TY V ++ +P D P N
Sbjct: 675 QGVKYESK----KTYKVVVSKKPVKQDKPIAN 702
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 33.5 bits (73), Expect = 0.33
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 14/117 (11%)
Query: 205 ETKVEAEETYDVPMNNRPAIYDVPSNNKTAFETLSLPFIDQSIELSITTNDREFDIKLSS 264
E K E+E T VP P + D+ T+ ET P +S+E + ++ +
Sbjct: 1311 EGKAESEGTESVPQGEAPEV-DIAE--PTSEET---PVEGESLEAQAVGH-----VEAAG 1359
Query: 265 KETSPMKSNPKTSTPEGSPAKVPKLSQVGTNSLHRKDFLSPPKQLSETGPYPDVVGS 321
+ETSP++SN ST E P VP S + D + + S+ P D+V S
Sbjct: 1360 EETSPVQSNQIESTVEEVPTDVPTESPSAEVKPVQSDIV---ESTSDEAPAEDLVES 1413
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 33.5 bits (73), Expect = 0.33
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 14/117 (11%)
Query: 205 ETKVEAEETYDVPMNNRPAIYDVPSNNKTAFETLSLPFIDQSIELSITTNDREFDIKLSS 264
E K E+E T VP P + D+ T+ ET P +S+E + ++ +
Sbjct: 206 EGKAESEGTESVPQGEAPEV-DIAE--PTSEET---PVEGESLEAQAVGH-----VEAAG 254
Query: 265 KETSPMKSNPKTSTPEGSPAKVPKLSQVGTNSLHRKDFLSPPKQLSETGPYPDVVGS 321
+ETSP++SN ST E P VP S + D + + S+ P D+V S
Sbjct: 255 EETSPVQSNQIESTVEEVPTDVPTESPSAEVKPVQSDIV---ESTSDEAPAEDLVES 308
>SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17)
Length = 1775
Score = 33.5 bits (73), Expect = 0.33
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 255 DREFDIKLSSKETSPMKSNPKTSTPEGSPAKVPKLSQVGTNSLHRKDFLSPPKQLSETGP 314
D E ++ S+ + + K PK G+ K + G ++ H + P K ++ +
Sbjct: 793 DSEKEVGKSNHDDAKTKVIPKEKKKNGNGTTTMKEASEGVSNKHVPHSIEPTKNINTSKN 852
Query: 315 YPDV--VGSTGNLKSCSVQDKDVSRL 338
PD+ GST K SV++ D RL
Sbjct: 853 DPDLSSKGSTSKNKISSVRNGDHDRL 878
Score = 32.7 bits (71), Expect = 0.57
Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 7/174 (4%)
Query: 172 SKITQSGLEILDSVEIYDQPCLNKAKIEESVKPETKVEAEETYDVP-MNNRPAIYDV--- 227
SK S ++L +I + N +++ +K + +A + ++NR +D
Sbjct: 598 SKDKASKGQVLHKDKISNSNTNNLSRLPSQIKAMRENKASNSLSKQILDNRVRKFDEKVK 657
Query: 228 PSNNKTAFETLSLPFIDQSIELSITTN-DREFDIKLSSKETSPMKSNPKTSTPEGSPAKV 286
P ++ S D ++E D E ++ S+ + + K PK G+
Sbjct: 658 PIHHDRLVNVSSTDIKDHAVEKETRGKVDSEKEVGKSNHDDAKPKVIPKEKKKNGNGTTT 717
Query: 287 PKLSQVGTNSLHRKDFLSPPKQLSETGPYPDV--VGSTGNLKSCSVQDKDVSRL 338
K + G ++ H P K + + PD+ GST K SV++ D RL
Sbjct: 718 MKEASEGVSNKHVPHSREPTKNIDTSKHDPDLSSKGSTSKNKISSVRNGDHDRL 771
>SB_45977| Best HMM Match : MBT (HMM E-Value=0)
Length = 1198
Score = 32.7 bits (71), Expect = 0.57
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Query: 159 TRLRSNIPLVGATSKITQSGLEILDSVEIYDQPCLNKAKIEESVKPETKVEA--EETYDV 216
T +RS++PL + Q+ + + + K E+ +PET A EET
Sbjct: 150 TPIRSSLPLTSSP----QANVACSTTEPAPQDQVSSSCKTTETSRPETSTSATSEETNST 205
Query: 217 PMNNRPAIYD---VPSNN-KTAFETLSLPFIDQSIELSITTNDREFDIKLSSKETSPMKS 272
+N+ + + PSN K E SLP +L+ + D+E DI+ ++ E + +
Sbjct: 206 -INHTESTKEPEGTPSNEVKVKQEDASLPMKKSENKLADKSVDKEADIRATATEAADSTT 264
Query: 273 NPKTSTPEG 281
++S P G
Sbjct: 265 ATESSDPFG 273
Score = 31.5 bits (68), Expect = 1.3
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Query: 193 LNKAKIEESVKPETKVEAEETYDVPMNNRPAIYDVPSNNKTAFETLSLPFIDQSIELSIT 252
+ K+K E V+ VE ++ P+ + + P N T P S T
Sbjct: 127 IEKSKPVEPVETRKPVEPVKSVLTPIRSSLPLTSSPQANVACSTTEPAPQDQVSSSCKTT 186
Query: 253 TNDR-EFDIKLSSKET-SPMKSNPKTSTPEGSPAKVPKLSQ 291
R E +S+ET S + T PEG+P+ K+ Q
Sbjct: 187 ETSRPETSTSATSEETNSTINHTESTKEPEGTPSNEVKVKQ 227
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 32.7 bits (71), Expect = 0.57
Identities = 61/269 (22%), Positives = 99/269 (36%), Gaps = 26/269 (9%)
Query: 23 KTLKPEVNSETAKDARNDPPV---ESEPDSVTVDSDLQRKDLDMSTGSVKLPIATINKSS 79
+ +KP A A P + SEP + L R+D + S P T ++
Sbjct: 2270 EAVKPSEQQRKAPSAHEKPELVGQPSEPGKGKQKAGLAREDATFKSSSQPKPQPTAQQTI 2329
Query: 80 LYTLRGKSDKIGAIDTDKCDRAISETVLIKDKPQR-TLKDPKHEPTFDSLSPNVKRIISS 138
L + + + +R S V P T PK EP S V R++
Sbjct: 2330 LKNTKPR---------ETLNRQGSNPVRPDSLPVTPTSSFPKEEPKGGLFSKFVSRLVEE 2380
Query: 139 ATEASALKFQKITTNAARSSTRLRSNIPLVGATSKI-TQSGLEILDSVEIYDQPCLNKAK 197
A QK +TN + +N+P SKI T+ +E + + +Q +A
Sbjct: 2381 APRGETNATQKASTNIQKD-----TNLPPAMKESKIDTRQAVE-ESELSLAEQHRRARAA 2434
Query: 198 IEESVKPETKVEAEETYD--VPMNNRPAIYDVPSNNKTAFETLSLPFIDQSIELSITTND 255
+ V+ + E EE + V + P + N T +E+ F +
Sbjct: 2435 AKTEVRANNRTEQEENPEKAVEVEKLPGPQMIGQN--TTYESEGGLFSKLGLRHPTEPPG 2492
Query: 256 REFDIKLSSKETSPMKSNPKTSTPEGSPA 284
++ I+ SK S ++ PKT T S A
Sbjct: 2493 KQKIIRQVSKSES--EAGPKTGTGNESRA 2519
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 32.3 bits (70), Expect = 0.76
Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 6/131 (4%)
Query: 126 DSLSPNVKRIISSATEASALKFQKITTNAARSSTRLRSNIPLVG-ATSKITQSGLEILDS 184
D+ P+VK +SS E+S K T T+ + P +G AT K S E D+
Sbjct: 1975 DTAVPSVKFGVSS--ESSDSKAAPGGTAITFGVTKSLEDKPKIGGATIKFGVSS-ETSDA 2031
Query: 185 VE--IYDQPCLNKAKIEESVKPETKVEAEETYDVPMNNRPAIYDVPSNNKTAFETLSLPF 242
+ + D L K+ S P+T A D +++P+I D T LP
Sbjct: 2032 SKPSVADAAALGFLKVPASTPPDTTPSASSPADTSSSSKPSIGDAAKAGFLKIPTAGLPK 2091
Query: 243 IDQSIELSITT 253
+ E S +T
Sbjct: 2092 AEVPKETSTST 2102
>SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028)
Length = 3809
Score = 31.9 bits (69), Expect = 1.0
Identities = 55/265 (20%), Positives = 101/265 (38%), Gaps = 16/265 (6%)
Query: 88 DKIGAIDTDKCDRAISETVLIKDKPQRTLKDP---KHEPTFDS-LSPNVKRIISSATEAS 143
D G + T +RA++ ++ + D T D H P + L+ + + +
Sbjct: 1518 DLAGELRTATSERAVTHSLKVVDPLATTTSDVVYITHSPKANEPLATRAGELPTVMHSSE 1577
Query: 144 ALKFQKITTNAARSSTRLRSNIPLVGATSKITQSGLEILDSVEIYDQPCLNKAKIEESVK 203
A + T + R+ T + + + T+ +S + S I+D K+ E VK
Sbjct: 1578 AFQPLPSTADKVRTVTHSQEVVSSLTITAGEVRS---VTHSSNIFDSLESKADKVAEGVK 1634
Query: 204 PETKVEAEETYDVPMNNRPAIYDVPSNNK-TAFETLSLPFIDQSIELSITTNDREFDIKL 262
P T + E ++ +P+ P T S P + ++ + +
Sbjct: 1635 PVTHIPEESETEIKPVKQPSEQIEPEEEPVTQTSEESEPEEEPMTQIPEESMSEAKPVVH 1694
Query: 263 SSKETSPMKSNPKTSTPEGSPAKVPKLSQVGTNSLHRKDFLSPPKQLSETGPYPDVVGST 322
+E+ P N K TPE S P++ V + K + P Q+ E PDV T
Sbjct: 1695 IPEESEPEVKNSK-QTPEESG---PEVESVKQKTKEIKMEVKPVTQIPEESE-PDVNPLT 1749
Query: 323 GNLKSCSVQDKDVSRL---NPPVIE 344
+ + K +S++ N P +E
Sbjct: 1750 QIPEEIETEVKPLSQILEENGPEVE 1774
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 31.1 bits (67), Expect = 1.8
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 14/105 (13%)
Query: 13 IGIYDSLLEPKT--LKPEVNSETAKDARNDPPVESEPDSVTVD-----------SDLQRK 59
+G LL T +KP VN + R+ V + P +D SD +RK
Sbjct: 998 LGPLSQLLPSSTPQVKPAVNQRLQRLQRHATDVPTPPSLDDLDFSFSPIKSSGLSDRKRK 1057
Query: 60 DLDMSTGSVKLP-IATINKSSLYTLRGKSDKIGAIDTDKCDRAIS 103
D+ + K+P + IN SS KS I D+D C R IS
Sbjct: 1058 DVTPQRRASKVPKLLPINDSSKSARGNKSRLIDGNDSDFCSREIS 1102
>SB_45513| Best HMM Match : COXG (HMM E-Value=1.3)
Length = 296
Score = 30.7 bits (66), Expect = 2.3
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 6/95 (6%)
Query: 250 SITTNDREFDIKLSSKETSPMKSNPK----TSTPEGSPA-KVPKLSQVGTNSLHRKDFLS 304
S+ TN +K + + +PK T+ +GS K+PK S + T ++ +
Sbjct: 116 SLDTNKPTIKLKFAGNFSPSSTGHPKVSVITAVGQGSKLDKIPKGSLI-TATIQGGTVIM 174
Query: 305 PPKQLSETGPYPDVVGSTGNLKSCSVQDKDVSRLN 339
PKQ + T P GS LK S + S LN
Sbjct: 175 SPKQKTATKPSTSDAGSPIALKHASALNSHASPLN 209
>SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 1034
Score = 30.7 bits (66), Expect = 2.3
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 217 PMNNRPAIYDVPSNNKTAFETLSLPFIDQSIELSITTNDREFDIKLSSKETSPMKSNPKT 276
P NR +IY+ P N+K+A+ +S ++ T+ + I + S E S K +
Sbjct: 543 PTINRTSIYNTPFNSKSAYHPVSFG--------TVKTSGSQ--INIFSSEQSNGKYSGNN 592
Query: 277 STPEGSPAK-VPKLSQVGTNSLHRKDFLSPPK 307
+ +G P K + +S T + R+ PPK
Sbjct: 593 ESSKGIPKKGIQSVSDDTTTIIPRRKAPPPPK 624
>SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28)
Length = 1643
Score = 30.3 bits (65), Expect = 3.1
Identities = 32/178 (17%), Positives = 77/178 (43%), Gaps = 10/178 (5%)
Query: 104 ETVLIKDKPQRTLKDPKHEPTFDSLSPNVKRIIS-SATEASALKFQKITTNAARSSTRLR 162
E L+++ +R K P ++P D+ +V RI + E+S + + R++ +
Sbjct: 161 ELSLLEEHIERAAKGPFYQPEHDTEGSHVSRIFCLISAESSEVDQENSNLEIPRAAAKKE 220
Query: 163 SNIPLVGATSKITQSGLEILDSVEIY-----DQPCLNKAK-IEESVKPETKVEAEETYDV 216
+++P + +G E ++V+ + D+P + I P T + T
Sbjct: 221 TDLPTITEQPDRLDTGPEYPNTVQDHPITGQDRPNPGPERPINVPDVPITGQDRPNTGPD 280
Query: 217 PMNNRPAIYDVPSNNKTAFETLSLPFIDQSIELSITTN-DREFDIKLSSKETSPMKSN 273
+N P + P N + + L+ P + + ++ + ++ D+++ + + P S+
Sbjct: 281 GLNTAPDLPKTPDNTRAS--ALASPPAKECVLAAVDMDTEKPIDMEICAGQAIPASSD 336
>SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 901
Score = 30.3 bits (65), Expect = 3.1
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 12 LIGIYDSLLEPKTLKPEVNSETAKDARNDPPVESEPDSVTVDSDLQRKDLDMSTGSVKLP 71
+I + L++ KT E+ E +K RN+ +V+ DSD + +D+ G +P
Sbjct: 432 IIDLKQKLVKAKTKFEELAIEPSKKHRNEASGSKTTRNVSEDSDNEFEDVPEKEGVECIP 491
Query: 72 IATINKSSLYTLRGKSDKIGAIDTDKCDRAISE 104
+ + L TL + + D + RAISE
Sbjct: 492 VNKRAEYGLDTL--ELSREDGQDLSERSRAISE 522
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 119 PKHEPTFDSLSPNVKRIISSATEASALKFQKITTNAARSSTRLRSNI 165
P H P + SLSP I SAT AS + +K T N A +LR+ +
Sbjct: 449 PSHHPPYCSLSPLNNLHIYSATRASGIT-RKKTLNYAGFFAKLRAKL 494
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 30.3 bits (65), Expect = 3.1
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 23 KTLKPEVNSETAKDARNDPPVESEPDSVTVDSDLQRKDLDMSTGSVKLPIATINKSSLYT 82
K+L PE K NDPPV TV SD+ ++ D+S G L I K + Y
Sbjct: 94 KSLAPEYAKAAKKMKLNDPPVPFAKMDATVASDIAQR-FDVS-GYPTLKI--FRKGTPYE 149
Query: 83 LRGKSDKIGAID 94
G ++ G ++
Sbjct: 150 YEGPREESGIVE 161
>SB_24101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 519
Score = 29.9 bits (64), Expect = 4.0
Identities = 21/118 (17%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Query: 14 GIYDSLLEPKTLKPEVNSETAKDARNDPPVESEPDSVTVDSDLQRKDLDMSTGSVKLPIA 73
GI+ + ++P+ ++ + E A + + T ++DL+++ S+ LP
Sbjct: 363 GIHSTTIQPEFVEDTLKKEECVLACGESASCAAQKCCTTEADLRKRVSSTKDESIDLPTV 422
Query: 74 TINKSSLYTLRGKSDKIGAIDTDKCDRAISETVLIKDKPQRTLKDPKHEPTFDSLSPN 131
+ +S YT+ +D + D+C+ + ++ + P D+++PN
Sbjct: 423 DLGPASFYTVDYDAD---VLLNDECEANVQTWRTKRNMGFWSFNLLMAHPVSDTVNPN 477
>SB_9846| Best HMM Match : DUF605 (HMM E-Value=0.046)
Length = 811
Score = 29.9 bits (64), Expect = 4.0
Identities = 24/124 (19%), Positives = 46/124 (37%), Gaps = 1/124 (0%)
Query: 194 NKAKIEESVKPETKVEAEETYDVPMNNRPAIYDVPSNNKTAFETLSLPFIDQSIELSITT 253
N + +S P + + P N P+ P+N S P + +
Sbjct: 576 NPSSNPKSNNPSSNPKPNNPSSNPRPNNPSSNPKPNNPXXXXNPSSNPKPNNPSS-NPKP 634
Query: 254 NDREFDIKLSSKETSPMKSNPKTSTPEGSPAKVPKLSQVGTNSLHRKDFLSPPKQLSETG 313
N+ + K +S ++P +NP ++ +PA PK + +N +P +
Sbjct: 635 NNPSSNPKSNSPASNPKSNNPSSNPKPNNPASNPKPNNPSSNPKPNNPSSNPKPNNPASN 694
Query: 314 PYPD 317
P P+
Sbjct: 695 PKPN 698
>SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 29.5 bits (63), Expect = 5.3
Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 11/173 (6%)
Query: 12 LIGIYDSLLEPKTLKPEVNSETAKDARNDPPVESEPDSVTVDSDLQRKDLDMSTGSVKLP 71
L+ + + P L+ E +S+T +DA E+ PD+V ++ D ++T P
Sbjct: 11 LLVLQSTQAAPVVLETEQSSDTTQDAPTQEAAETAPDAVPQEAADAAPDEGVATEQADNP 70
Query: 72 IATINKSSLYTLRGKS--DKIGAIDTDKCDRAISETVLIK--DKPQRTLKDPKHEPTFDS 127
S + S D+ +D++ + + + K +KPQ K+ + +S
Sbjct: 71 SPDQTSGSPTAVDSSSEPDQAANVDSEVNQKVDAPQAVDKEEEKPQAADKEEEKSQKEES 130
Query: 128 LSPNVKRI----ISSATEASALKFQKITTNA--ARSSTRLRSNIPLVGATSKI 174
SP ++ S E S+L + + +A + TR ++ V +KI
Sbjct: 131 -SPATDKVEPKPAPSEAEGSSLGGEDVDPSADKCKDVTRCKNGGTCVNDYNKI 182
>SB_32293| Best HMM Match : BRCA2 (HMM E-Value=0)
Length = 1649
Score = 29.5 bits (63), Expect = 5.3
Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 230 NNKTAFETLSLPFIDQSIELSITTNDREFDIKLSSKET--------SPMKSNPKTSTPEG 281
++ T+ E SLP ++++ ELS+ E K +S + SP+ S+ + +
Sbjct: 118 SDNTSLEVTSLPELEENSELSLMPFASENTTKTTSNRSEREPAPAVSPLVSSQEVKSFHA 177
Query: 282 SPAKVPKLSQVGTNSLHRKDFLSPPKQLSET 312
P PK++++ ++ K+L +T
Sbjct: 178 LPQSTPKITKINVKRRDKRHRRGRTKKLCKT 208
>SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3051
Score = 29.5 bits (63), Expect = 5.3
Identities = 24/118 (20%), Positives = 47/118 (39%)
Query: 195 KAKIEESVKPETKVEAEETYDVPMNNRPAIYDVPSNNKTAFETLSLPFIDQSIELSITTN 254
K K + + P++ E++ VP + + S+N + + S +I +S ++
Sbjct: 419 KGKSNKRMIPQSSTESQVLISVPGSQPQSSTSSSSSNSQSSPSSSSSTTSATISISKSSA 478
Query: 255 DREFDIKLSSKETSPMKSNPKTSTPEGSPAKVPKLSQVGTNSLHRKDFLSPPKQLSET 312
D+ + K T+ + P++ST VP + S + S P S T
Sbjct: 479 DKSTRKQGHGKGTNNKRMIPQSSTESQVLISVPGSQPQSSTSSSSSNLQSSPSSSSST 536
>SB_21130| Best HMM Match : Smg4_UPF3 (HMM E-Value=1.5)
Length = 565
Score = 29.5 bits (63), Expect = 5.3
Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 230 NNKTAFETLSLPFIDQSIELSITTNDREFDIKLSSKET--------SPMKSNPKTSTPEG 281
++ T+ E SLP ++++ ELS+ E K +S + SP+ S+ + +
Sbjct: 259 SDNTSLEVTSLPELEENSELSLMPFASENTTKTTSNRSEREPAPAVSPLVSSQEVKSFHA 318
Query: 282 SPAKVPKLSQVGTNSLHRKDFLSPPKQLSET 312
P PK++++ ++ K+L +T
Sbjct: 319 LPQSTPKITKINVKRRDKRHRRGRTKKLCKT 349
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 29.1 bits (62), Expect = 7.1
Identities = 28/130 (21%), Positives = 56/130 (43%), Gaps = 2/130 (1%)
Query: 156 RSSTRLRSNIPLVGATSKITQSGLEILDSVEIYDQPCLNKAKIEESVKPETKVEAEETYD 215
RS +R + + G + G +L SVE+ + K++ V + +
Sbjct: 64 RSKSREKGDTYAEGTLDESVVEG-PLLPSVEVSHEKNEQKSQPNSPVDNDNSESKRRSRS 122
Query: 216 VPMNNRPAIYDVPSNNKTAFETLSLPFIDQSIELSITTNDREFDIKLSSKETSPMKSNPK 275
+ P + S +K+ ++ + I+ S+E + +N+++ D KLSSK +K K
Sbjct: 123 RSFSWPPRERNSKSKSKSRSKS-PVNTINGSLESKVQSNEKDTDEKLSSKLLKCLKDKHK 181
Query: 276 TSTPEGSPAK 285
+ + S K
Sbjct: 182 SRSRSNSKDK 191
>SB_17079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2537
Score = 29.1 bits (62), Expect = 7.1
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 41 PPVESEPDSVTVDSDLQRKDLDMSTGSVKLPIATINKSSLYTLRGKSDKI 90
P V S D +TVD LQ+ D+ + + N + TLRG+SD +
Sbjct: 1050 PSVLSLNDPITVDEALQQFASDVCEAVTCMSLRRKNVPNFGTLRGRSDLV 1099
>SB_58507| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2353
Score = 29.1 bits (62), Expect = 7.1
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 5 TTDLTPTLIGIYDSLLEPKTLKPEVNSETAKDARNDPPVESEPDSVTVDSDLQRKDLDMS 64
T L T G +L LKP ++ A+ N P ++ + S SD + +
Sbjct: 723 TEVLITTENGTGRQVLVSSGLKPVLDGIFAEVNANIPQLDFDSAS-EASSDSEEPQIFSR 781
Query: 65 TGSVKLPIATINKSSLYTLRGKSDKIGAIDTDKCDRAISETVLIKD 110
TG V PI+++ S+ K D G ID D A++ + +KD
Sbjct: 782 TG-VLTPISSLATESV----DKDDSPGTIDDKIFDNAVNAEMTVKD 822
>SB_51436| Best HMM Match : Neuromodulin (HMM E-Value=6.2)
Length = 359
Score = 29.1 bits (62), Expect = 7.1
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 5 TTDLTPTLIGIYDSLLEPKTLKPEVNSETAKDARNDPPVESEPDSVTVDSDLQRKDLDMS 64
T L T G +L LKP ++ A+ N P ++ + S SD + +
Sbjct: 9 TEVLITTENGTGRQVLVTSGLKPVLDGIFAEVNANIPELDFDSAS-EASSDSEEPQIFSR 67
Query: 65 TGSVKLPIATINKSSLYTLRGKSDKIGAIDTDKCDRAISETVLIKD 110
TG V PI+++ S+ K D G ID D A++ + +KD
Sbjct: 68 TG-VLTPISSLATESV----DKDDSPGTIDDKIFDNAVNAEMTVKD 108
>SB_3979| Best HMM Match : Syndecan (HMM E-Value=0.0017)
Length = 436
Score = 29.1 bits (62), Expect = 7.1
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 3 RSTTDLTPTLIGIYDSLLEPKTLKPEVNSETAKDARNDPPVESEPDSVTVDSDLQRKDLD 62
+ST +T I I + E T KP ++S T+K + N+ +P T S++ +++
Sbjct: 229 QSTQGVTTETIVIPEKTTEIPTTKPILSSATSKPSTNEVDWSGKP---TESSNITSENVT 285
Query: 63 MSTGSVKLPI 72
S +VKL +
Sbjct: 286 SSKFTVKLTV 295
>SB_605| Best HMM Match : Calx-beta (HMM E-Value=0)
Length = 1958
Score = 29.1 bits (62), Expect = 7.1
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 222 PAIYDVPSNNKTAFETLSLPFIDQSIELSITTNDREFDIKLSSKE 266
PA+ D+ + ++T+S+P ID + ND +F +KL S +
Sbjct: 1094 PAVVDLVLGPEDTWKTISIPIIDD----NQVENDEKFTVKLQSSD 1134
>SB_20117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 28.7 bits (61), Expect = 9.3
Identities = 14/65 (21%), Positives = 30/65 (46%)
Query: 253 TNDREFDIKLSSKETSPMKSNPKTSTPEGSPAKVPKLSQVGTNSLHRKDFLSPPKQLSET 312
+N+ F+ K ++ ++P +NP ++ +PA PK + +N +P +
Sbjct: 19 SNNPAFNPKSNNPASNPKPNNPASNPKPNNPASNPKPNNPSSNPKPNNPSSNPKPNNPSS 78
Query: 313 GPYPD 317
P P+
Sbjct: 79 NPKPN 83
>SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032)
Length = 1199
Score = 28.7 bits (61), Expect = 9.3
Identities = 24/110 (21%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 186 EIYDQPCLNKAKIEESVKPETKVEAE-ETYDVPMNNRPAIYDVPSNNKTAFETLSLP-FI 243
E +D+ L+K KI+E KP+ + + + + ++ + + +T + +
Sbjct: 431 EQFDEEVLDKGKIKEDKKPDKRFSRKGQKRERSVDYQSECQRRSTRTRTPSSKIEPEGKV 490
Query: 244 DQSIELSITTNDREFDIKLSSKETSPMKSNPKTSTPEGSPAKVPKLSQVG 293
++ E S T + D L+ K++ +T TP+ P++ +LSQ G
Sbjct: 491 EKKTETSKTKKRKTMD-DLTDDVRKTDKTDGETKTPKTLPSEDSRLSQEG 539
>SB_2603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 360
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 183 DSVEIYDQPCLNKAKIEESVKPETKVEAEETYDVPMNNR 221
++ +Y L K+ +E+++ PET+++A+E M NR
Sbjct: 3 ENKSLYQIEKLCKSNLEDTMSPETQMQAKEALFSEMKNR 41
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.307 0.126 0.343
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,801,608
Number of Sequences: 59808
Number of extensions: 582472
Number of successful extensions: 1818
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1766
Number of HSP's gapped (non-prelim): 80
length of query: 420
length of database: 16,821,457
effective HSP length: 84
effective length of query: 336
effective length of database: 11,797,585
effective search space: 3963988560
effective search space used: 3963988560
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 61 (28.7 bits)
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