GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000107-TA|BGIBMGA000107-PA|IPR002056|Protein import
receptor MAS20
         (155 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    23   5.8  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    22   7.7  

>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
          protein.
          Length = 298

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 10/39 (25%), Positives = 21/39 (53%)

Query: 40 KLRERRLNAQQNASRSRTLGGPVPDMNDHEAMQRFFLQQ 78
          +   R+   QQ   ++ ++ G    ++DH+ +Q+  LQQ
Sbjct: 18 RAERRQQQQQQQQLQTTSIAGGRLSVDDHQPLQQKNLQQ 56


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 129 KKLPEVSERLRSSMKARSNVMQEED 153
           K+L EV  R RSS    +NV+  +D
Sbjct: 349 KQLQEVEMRERSSKSLLANVLDIDD 373


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.135    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,583
Number of Sequences: 2123
Number of extensions: 3692
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 2
length of query: 155
length of database: 516,269
effective HSP length: 59
effective length of query: 96
effective length of database: 391,012
effective search space: 37537152
effective search space used: 37537152
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)