Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000107-TA|BGIBMGA000107-PA|IPR002056|Protein import
receptor MAS20
(155 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061414-1|AAL28962.1| 171|Drosophila melanogaster LD34461p pro... 141 4e-34
AE014296-3266|AAF49080.2| 171|Drosophila melanogaster CG7654-PA... 141 4e-34
AE014297-1180|AAF54543.1| 147|Drosophila melanogaster CG14690-P... 91 5e-19
BT022641-1|AAY55057.1| 88|Drosophila melanogaster IP07008p pro... 46 3e-05
BT022614-1|AAY55030.1| 88|Drosophila melanogaster IP06908p pro... 46 3e-05
L09700-1|AAA28569.1| 399|Drosophila melanogaster GTP-binding pr... 29 2.1
AE014296-2779|AAF49429.2| 399|Drosophila melanogaster CG12232-P... 29 2.1
>AY061414-1|AAL28962.1| 171|Drosophila melanogaster LD34461p
protein.
Length = 171
Score = 141 bits (341), Expect = 4e-34
Identities = 64/137 (46%), Positives = 92/137 (67%), Gaps = 4/137 (2%)
Query: 1 MMEITRTTLGIAVGIAGTLFLGYCVYFDQQRRKDPLFKKKLRERRLNAQQNASRSRTLGG 60
M+E+ +T +GIA G+AGTLF+GYC+YFD++RR DP +KKK+RERR + ++ T
Sbjct: 1 MIEMNKTAIGIAAGVAGTLFIGYCIYFDKKRRSDPEYKKKVRERR----RRNKKTGTAKS 56
Query: 61 PVPDMNDHEAMQRFFLQQIQXXXXXXXXXXXXXXVEHLGQAVAVCGQTEQLLSVLQQTMP 120
VP++NDHEA++R+FLQ+IQ VEHL A+ VCGQ +LL VLQ ++P
Sbjct: 57 GVPNLNDHEAIERYFLQEIQLGETLIARGDFESGVEHLANAIVVCGQPARLLQVLQSSLP 116
Query: 121 APIFHLLLKKLPEVSER 137
A +F +L+ K+ E R
Sbjct: 117 AQVFAMLIVKMQEFGNR 133
>AE014296-3266|AAF49080.2| 171|Drosophila melanogaster CG7654-PA
protein.
Length = 171
Score = 141 bits (341), Expect = 4e-34
Identities = 64/137 (46%), Positives = 92/137 (67%), Gaps = 4/137 (2%)
Query: 1 MMEITRTTLGIAVGIAGTLFLGYCVYFDQQRRKDPLFKKKLRERRLNAQQNASRSRTLGG 60
M+E+ +T +GIA G+AGTLF+GYC+YFD++RR DP +KKK+RERR + ++ T
Sbjct: 1 MIEMNKTAIGIAAGVAGTLFIGYCIYFDKKRRSDPEYKKKVRERR----RRNKKTGTAKS 56
Query: 61 PVPDMNDHEAMQRFFLQQIQXXXXXXXXXXXXXXVEHLGQAVAVCGQTEQLLSVLQQTMP 120
VP++NDHEA++R+FLQ+IQ VEHL A+ VCGQ +LL VLQ ++P
Sbjct: 57 GVPNLNDHEAIERYFLQEIQLGETLIARGDFESGVEHLANAIVVCGQPARLLQVLQSSLP 116
Query: 121 APIFHLLLKKLPEVSER 137
A +F +L+ K+ E R
Sbjct: 117 AQVFAMLIVKMQEFGNR 133
>AE014297-1180|AAF54543.1| 147|Drosophila melanogaster CG14690-PA
protein.
Length = 147
Score = 91.5 bits (217), Expect = 5e-19
Identities = 52/132 (39%), Positives = 72/132 (54%), Gaps = 7/132 (5%)
Query: 8 TLGIAVGIAGTLFLGYCVYFDQQRRKDPLFKKKLRERRLNAQQNASRSRTLGGPVPDMND 67
T + I+G LF+GYCVYFD+QRR DP FK+KL ERR+ Q++ + ++ D
Sbjct: 7 TFKVLAAISGILFMGYCVYFDKQRRSDPDFKRKLHERRI--QRSLASVKSTASVSMSERD 64
Query: 68 HEAMQRFFLQQIQXXXXXXXXXXXXXXVEHLGQAVAVCGQTEQLLSVLQQTMPAPIFHLL 127
E +F+ QI VEHL A+ VCGQ +LL +LQ T+P IF +
Sbjct: 65 VEV---YFMTQIHKGETLITNGDVEAGVEHLINAILVCGQPSKLLQLLQSTLPMDIFTTM 121
Query: 128 LKKLP--EVSER 137
L K+ E S+R
Sbjct: 122 LIKMHAYEASQR 133
>BT022641-1|AAY55057.1| 88|Drosophila melanogaster IP07008p
protein.
Length = 88
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 74 FFLQQIQXXXXXXXXXXXXXXVEHLGQAVAVCGQTEQLLSVLQQTMPAPIFHLLLKKLP- 132
+F+ QI VEHL A+ VCGQ +LL +LQ T+P IF +L K+
Sbjct: 9 YFMTQIHKGETLITNGDVEAGVEHLINAILVCGQPSKLLQLLQSTLPMDIFTTMLIKMHA 68
Query: 133 -EVSER 137
E S+R
Sbjct: 69 YEASQR 74
>BT022614-1|AAY55030.1| 88|Drosophila melanogaster IP06908p
protein.
Length = 88
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 74 FFLQQIQXXXXXXXXXXXXXXVEHLGQAVAVCGQTEQLLSVLQQTMPAPIFHLLLKKLP- 132
+F+ QI VEHL A+ VCGQ +LL +LQ T+P IF +L K+
Sbjct: 9 YFMTQIHKGETLITNGDVEAGVEHLINAILVCGQPSKLLQLLQSTLPMDIFTTMLIKMHA 68
Query: 133 -EVSER 137
E S+R
Sbjct: 69 YEASQR 74
>L09700-1|AAA28569.1| 399|Drosophila melanogaster GTP-binding
protein alpha-subunit protein.
Length = 399
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 14 GIAGTLFLGYCVYFDQQRRKDPLFKKKLRERRLNAQQNASRSRTLGGPVPDMNDHEAMQR 73
GI LFL C FDQ R+DP + +L +R G + +N ++ M+R
Sbjct: 238 GIQAVLFLISCSEFDQNLREDPSQNRLQEALKLFRAVWQNRFLASAGLIVFLNKYDIMER 297
>AE014296-2779|AAF49429.2| 399|Drosophila melanogaster CG12232-PA
protein.
Length = 399
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 14 GIAGTLFLGYCVYFDQQRRKDPLFKKKLRERRLNAQQNASRSRTLGGPVPDMNDHEAMQR 73
GI LFL C FDQ R+DP + +L +R G + +N ++ M+R
Sbjct: 238 GIQAVLFLISCSEFDQNLREDPSQNRLQEALKLFRAVWQNRFLASAGLIVFLNKYDIMER 297
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.322 0.135 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,044,981
Number of Sequences: 52641
Number of extensions: 204932
Number of successful extensions: 514
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 506
Number of HSP's gapped (non-prelim): 7
length of query: 155
length of database: 24,830,863
effective HSP length: 79
effective length of query: 76
effective length of database: 20,672,224
effective search space: 1571089024
effective search space used: 1571089024
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -