BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000105-TA|BGIBMGA000105-PA|IPR009003|Peptidase,
trypsin-like serine and cysteine
(113 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-1462|AAF50412.1| 2444|Drosophila melanogaster CG6915-PA... 26 10.0
>AE014296-1462|AAF50412.1| 2444|Drosophila melanogaster CG6915-PA
protein.
Length = 2444
Score = 26.2 bits (55), Expect = 10.0
Identities = 16/85 (18%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 15 KGFKVPCYHSCDLPEFIEKNKRCENYHGVEGGAVFDKKKNQLIGVATW-GAYYPKYELPV 73
+G KVP S + E +++ + Y+ + G +F +G+ + A + L +
Sbjct: 1131 EGSKVPLADSESIQETVDRGRTTVLYYSLAGDQLFTWLLEPHVGIVRFHAAKIDAHSLQL 1190
Query: 74 GYSVANSDNFYADYMCAKRIKMDND 98
S++ + D + +K++ D
Sbjct: 1191 PLSLSEEEEEEEDLEMERELKLNRD 1215
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.324 0.141 0.466
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,466,681
Number of Sequences: 52641
Number of extensions: 263988
Number of successful extensions: 445
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 445
Number of HSP's gapped (non-prelim): 1
length of query: 113
length of database: 24,830,863
effective HSP length: 75
effective length of query: 38
effective length of database: 20,882,788
effective search space: 793545944
effective search space used: 793545944
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 55 (26.2 bits)
- SilkBase 1999-2023 -