GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000104-TA|BGIBMGA000104-PA|IPR008968|Mu2 adaptin subunit
(AP50) of AP2, IPR001392|Clathrin adaptor complex, medium chain,
IPR011012|Longin-like
         (571 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    27   1.3  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    27   1.8  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           26   3.1  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 27.1 bits (57), Expect = 1.3
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 10/90 (11%)

Query: 102 KLMTGGRQHTFVET--ESVRYVYQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCV 159
           K + G    + + T  +++RY  + +   Y LL+T+ A    E L T  L S     YC 
Sbjct: 630 KKLRGNEAASVIATLPKTIRYPTETVMHEYFLLVTSNAVQHQEYLNTTALIS-----YCD 684

Query: 160 QLTETEVLNQ-AFNL--LFAFDEIVALGYR 186
            L   +V N+ A+N   +++F  +    Y+
Sbjct: 685 FLNRAQVNNRSAYNYYPVYSFGRLADADYK 714


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 26.6 bits (56), Expect = 1.8
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 8/74 (10%)

Query: 116 ESVRYVYQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQ-AFNL- 173
           +++RY  + +   Y LL+T+ A    E L T  L S     YC  L   +V N+ A+N  
Sbjct: 646 KTIRYPTETVMHEYFLLVTSNAVQHQEYLNTTALIS-----YCDFLNRAQVNNRSAYNYY 700

Query: 174 -LFAFDEIVALGYR 186
            +++F  +    Y+
Sbjct: 701 PVYSFGRLADADYK 714


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 25.8 bits (54), Expect = 3.1
 Identities = 17/96 (17%), Positives = 41/96 (42%), Gaps = 2/96 (2%)

Query: 274 TTPARDTRTVGRSAMKLGSRGTDADSFVSRLRSEGDVTAPVASAAQHDAGKPVPADHKDV 333
           T P  +   +  + +++   G D   ++ ++ +E   +    + A+ +  + +      V
Sbjct: 163 TVPIYEGYALPHAILRMDLAGRDLTDYLMKILTERGYS--FTTTAEREIVRDIKEKLCYV 220

Query: 334 HLRFEERLNLIAGRDGDIQTFELSGLLTLRISNEQF 369
            L FE+ +   A      +++EL     + I NE+F
Sbjct: 221 ALDFEQEMQAAAASSSSEKSYELPDGQVITIGNERF 256


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.133    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,251
Number of Sequences: 2123
Number of extensions: 20298
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 5
length of query: 571
length of database: 516,269
effective HSP length: 68
effective length of query: 503
effective length of database: 371,905
effective search space: 187068215
effective search space used: 187068215
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)