Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000102-TA|BGIBMGA000102-PA|undefined
(777 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g61690.1 68416.m06913 expressed protein 36 0.077
At1g07350.1 68414.m00783 transformer serine/arginine-rich ribonu... 36 0.14
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 34 0.31
At3g62170.1 68416.m06985 pectinesterase family protein contains ... 33 0.95
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 33 0.95
At5g23800.1 68418.m02794 agenet domain-containing protein contai... 32 1.3
At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3) ... 32 1.3
At1g07310.1 68414.m00778 C2 domain-containing protein contains s... 32 1.3
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 32 1.7
At2g17480.1 68415.m02019 seven transmembrane MLO family protein ... 32 1.7
At2g47220.1 68415.m05897 3' exoribonuclease family domain 1 prot... 31 2.2
At2g24050.1 68415.m02873 MIF4G domain-containing protein / MA3 d... 31 2.2
At5g64910.1 68418.m08165 expressed protein ; expression support... 31 2.9
At3g54760.1 68416.m06059 dentin sialophosphoprotein-related cont... 31 2.9
At3g28830.1 68416.m03597 expressed protein 31 2.9
At1g24764.1 68414.m03106 expressed protein 31 2.9
At5g64200.2 68418.m08063 arginine/serine-rich splicing factor SC... 31 3.8
At5g64200.1 68418.m08062 arginine/serine-rich splicing factor SC... 31 3.8
At1g01260.1 68414.m00043 basic helix-loop-helix (bHLH) family pr... 31 3.8
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 30 5.1
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 30 5.1
At1g30470.1 68414.m03724 SIT4 phosphatase-associated family prot... 30 5.1
At4g02430.2 68417.m00330 pre-mRNA splicing factor, putative / SR... 30 6.7
At2g43970.2 68415.m05468 La domain-containing protein contains P... 30 6.7
At2g43970.1 68415.m05467 La domain-containing protein contains P... 30 6.7
At2g22795.1 68415.m02704 expressed protein 30 6.7
At1g07980.1 68414.m00869 histone-like transcription factor (CBF/... 30 6.7
At5g63420.1 68418.m07962 metallo-beta-lactamase family protein 29 8.9
At5g62550.1 68418.m07850 expressed protein 29 8.9
At5g10500.1 68418.m01216 kinase interacting family protein simil... 29 8.9
At5g07820.1 68418.m00896 expressed protein 29 8.9
At4g12910.1 68417.m02019 serine carboxypeptidase S10 family prot... 29 8.9
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 29 8.9
At1g68920.2 68414.m07888 basic helix-loop-helix (bHLH) family pr... 29 8.9
At1g33500.1 68414.m04146 hypothetical protein 29 8.9
>At3g61690.1 68416.m06913 expressed protein
Length = 1303
Score = 36.3 bits (80), Expect = 0.077
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 116 DWETNPNKRFSGNARGSDSQFNFRSGRRSANRFQGQGSSKRQPAAE--PQFSNKGPGRSS 173
+W R SG + +Q + + R + GSS R ++ S GP RS+
Sbjct: 1143 NWNAGSKTRGSGRNHNNRNQADNKPISRQDRSDRHWGSSYRHESSSYSAHHSQNGPIRSN 1202
Query: 174 TDRPKSGKVTKAKTSLPPN-KLNTYSISERNNL 205
T + SG + LPP K N+ + SE +N+
Sbjct: 1203 TSQDASGNIAYGMYRLPPGMKQNSVTSSEGHNV 1235
>At1g07350.1 68414.m00783 transformer serine/arginine-rich
ribonucleoprotein, putative similar to GB:Y09506 from
[Nicotiana tabacum] (Plant Mol. Biol. 35 (3), 261-269
(1997))
Length = 382
Score = 35.5 bits (78), Expect = 0.14
Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 10/120 (8%)
Query: 63 REKSLNYDSPRYFERASFQNANNVDSDYTRYYDESVG----SGDFIPLNSRKRSYQPDWE 118
R KS +Y SPR S + + SD R Y S G S + P R+R Y P
Sbjct: 173 RHKSPSY-SPRRSVSCSRSRSRSYSSDRGRSYSPSYGRRGRSSSYSPFYRRRRFYSPSRS 231
Query: 119 TNPNKRFSGNARGSDSQFNFRSGRRSANRFQGQGSSKRQPAAEPQFSNKGPGRSSTDRPK 178
+P+ R++ R D ++ RR +R + R P + + RS + P+
Sbjct: 232 PSPDDRYN---RRRDRSYSPYYRRRDRSRSYSRNCRARD--RSPYYMRRYRSRSRSYSPR 286
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 34.3 bits (75), Expect = 0.31
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 15/126 (11%)
Query: 72 PRYF-ERASFQNANNVDSDYTRYYDESVGSGDFIPLNSRKRSYQPDWETNPNKRFSGNAR 130
PR++ +R +FQ+ N R Y E G F R+RS P + N+R +R
Sbjct: 439 PRHWPDRRNFQDRNRDRYPSNRSYSERSPRGRFRS-PPRRRS-PPRY----NRRRRSTSR 492
Query: 131 GSDS-QFNFRSGRRSAN---RFQGQGSSKRQPAAEPQFSNKGPGRSSTDRPKSGKVTKAK 186
D + R G RS + R + Q KRQP ++ S GP RS P G T
Sbjct: 493 SPDGYRRRLRDGSRSQSPRHRSRSQSPRKRQPISQDLKSRLGPQRS----PIRGGRTSPA 548
Query: 187 TSLPPN 192
SL P+
Sbjct: 549 ESLSPS 554
>At3g62170.1 68416.m06985 pectinesterase family protein contains
Pfam profiles: PF01095 pectinesterase, PF04043 plant
invertase/pectin methylesterase inhibitor ;similar to
pollen-specific pectin esterase GI:1620652 from
[Brassica rapa subsp. pekinensis]
Length = 588
Score = 32.7 bits (71), Expect = 0.95
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 151 QGSSKRQPAAEPQFSNKGPGRSSTDRPKSGKVTKA 185
QG + A +F+N+GPG ++T RP KV K+
Sbjct: 524 QGEQNHKTAKYIEFNNRGPGAATTQRPPWVKVAKS 558
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 32.7 bits (71), Expect = 0.95
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 684 EKNDDVVVAPETT-ADKPVSELPNENKTVDTENNDESKANEQ 724
EK ++ V A + AD+PV E P E +T+ TE + E+
Sbjct: 1851 EKTEEYVEAQQDNEADEPVEESPTETETIPTEEESRDQTEEE 1892
Score = 30.7 bits (66), Expect = 3.8
Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 4/92 (4%)
Query: 684 EKNDDVVVAPETTADKPVSELPNENKTVDTENNDESKANEQTGDMAEEAKDVISNL--KS 741
E + + P + + + + T++T D+ ++ GD AEEA D+ +N +
Sbjct: 1934 EVQPETLATPTQSPSRMETAMEEAETTIETPVEDDK--TDEGGDAAEEAADIPNNANDQQ 1991
Query: 742 EVPATPTRSSAXXXXXXXXXXXXXXXXXLAAA 773
E P T + LA+A
Sbjct: 1992 EAPETDIKPETSAATTSPVSTAPTTSSTLASA 2023
>At5g23800.1 68418.m02794 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 552
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 685 KNDDVVVAPETTADKPVSELPNENKTVDTENNDESKANEQTGDMAEEAK--DVISNLKSE 742
K D++ A + TA+K ++ NE K ++ + +E A E M+ E K + N+K E
Sbjct: 476 KMDELKGAKKVTAEKESVKVENERKILELQRLNEEMAKEIAQSMSCEGKILQQLDNMKLE 535
Query: 743 VPAT 746
AT
Sbjct: 536 FQAT 539
>At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3)
family protein low similarity to Translation initiation
factor IF-3 from [subsp. Schizaphis graminum] {Buchnera
aphidicola} SP|P46243, {Salmonella typhimurium}
SP|P33321; contains Pfam profiles PF05198: Translation
initiation factor IF-3 N-terminal domain, PF00707:
Translation initiation factor IF-3 C-terminal domain
Length = 520
Score = 32.3 bits (70), Expect = 1.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 140 SGRRSANRFQGQGSSKRQPAAEPQFSNKGPGRSSTDR 176
SG R A+RF+ Q ++ P+FSN+ P + T R
Sbjct: 327 SGGRDASRFEPQSPNQHVNPQRPRFSNQAPNQQPTGR 363
>At1g07310.1 68414.m00778 C2 domain-containing protein contains
similarity to shock protein SRC2 [Glycine max]
gi|2055230|dbj|BAA19769 ; contains Pfam profile
PF00168:C2 domain
Length = 352
Score = 32.3 bits (70), Expect = 1.3
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 155 KRQPAAEPQFSNKGPGRSSTDRPKSG-KVTKAKTSLPP--NKLNTYSI 199
K+ P A P+FSN GP S P VT+ K PP ++L++Y +
Sbjct: 248 KQPPLAPPRFSNYGPPPSGPSAPVDAFLVTEYKPQAPPMGSRLSSYGV 295
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 31.9 bits (69), Expect = 1.7
Identities = 39/157 (24%), Positives = 60/157 (38%), Gaps = 12/157 (7%)
Query: 42 LKRKRXXXXXXXXXXXXXXXHREKSLNYDSPRYFERASFQNANNVDSDYTRYYDESVGSG 101
+KRKR +S Y S Y +S + TR+ G
Sbjct: 221 IKRKRRYSSSDSYSSSSDSDSDSESEAYSSSSYESSSSSDGKHRKRKSTTRHKGRR-GER 279
Query: 102 DFIPLNSRKRSYQPDWETNPNKRF-SGNARGSDSQFN--FRSGRRSAN---RFQGQGSSK 155
+ +K++ +PD + + N + ++ SD + R G RS + R + Q K
Sbjct: 280 KSKGRSGKKKA-RPDRKPSTNSSSDTESSSSSDDGYRRRLRDGSRSQSPRHRSRSQSPRK 338
Query: 156 RQPAAEPQFSNKGPGRSSTDRPKSGKVTKAKTSLPPN 192
RQP ++ S GP RS P G T SL P+
Sbjct: 339 RQPISQDLKSRLGPQRS----PIRGGRTSPAESLSPS 371
>At2g17480.1 68415.m02019 seven transmembrane MLO family protein /
MLO-like protein 8 (MLO8) identical to membrane protein
Mlo8 [Arabidopsis thaliana] gi|14091586|gb|AAK53801;
similar to MLO protein SWISS-PROT:P93766,
NCBI_gi:1877221 [Hordeum vulgare][Barley]
Length = 593
Score = 31.9 bits (69), Expect = 1.7
Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Query: 123 KRFSGNARGSDSQFNFRSGR--RSANRFQGQGSSKRQPAAEPQFSNKGPGRSSTDRPKSG 180
KR G+ S + RS RS R++ S R +P+ S+ + PKS
Sbjct: 489 KRLGGDGSASPTASTVRSTSSVRSLQRYKTTPHSMRYEGLDPETSDLDTDNEALTPPKSP 548
Query: 181 KVTKAKTSLPPNKLNTYSISERNNLVKKTTSAAK 214
+ + PNK NT S K S K
Sbjct: 549 PSFELVVKVEPNKTNTGETSRDTETDSKEFSFVK 582
>At2g47220.1 68415.m05897 3' exoribonuclease family domain 1
protein-related similar to polynucleotide phosphorylase
[Pisum sativum] GI:2286200, polyribonucleotide
phophorylase [Spinacia oleracea] GI:1924972; contains
Pfam profiles PF05266: Protein of unknown function
(DUF724), weak hit to PF01138: 3' exoribonuclease
family, domain 1
Length = 469
Score = 31.5 bits (68), Expect = 2.2
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Query: 244 LKELKTKFSEVEAYRDTIQSPLAQRTVKQILRDRIKELMMNKYIGGINDGLTVYRKRYPE 303
L LK F+E+E + T+ +PL++ L+DR +++ + L V+ K +
Sbjct: 354 LNSLKDSFTELEKHGFTVTAPLSRIAKLLALKDRQLKIL---------EELKVFDKEMKD 404
Query: 304 GTDEALLEEVKQAKEELNVKNPDNKLIQSDDPEAFLEKNLEKLIHSKLVEM 354
+ + E + + E + NK+++ EA LEK + + K+ +M
Sbjct: 405 ESSKKHKAEQEFGEMERKILEVKNKVLELQKQEAALEKQ-KDATYEKICKM 454
>At2g24050.1 68415.m02873 MIF4G domain-containing protein / MA3
domain-containing protein similar to SP|Q03387
Eukaryotic initiation factor (iso)4F subunit P82-34
(eIF-(iso)4F P82-34) {Triticum aestivum}; contains Pfam
profiles PF02854: MIF4G domain, PF02847: MA3 domain
Length = 747
Score = 31.5 bits (68), Expect = 2.2
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 14/123 (11%)
Query: 104 IPLNSRKRSYQPDWETNP--NKRFSGNAR----GSDSQFNFRSGRRSANRFQGQGSSKRQ 157
+P +R+ QP ++ P NK S N+R GS N G R + QG GSS
Sbjct: 490 MPRGNRQTVQQPRFQPPPAINKSLSVNSRLLPQGSGGLLN--GGGRPSPLLQGNGSSSAP 547
Query: 158 PAAEPQFSNKGPGRSSTDRPKSGKVTKAKTSLPPNKLNTYSISERNNLVKKTTSAAKKVD 217
A++P + + P +P+S + + + N LN + + + + + + VD
Sbjct: 548 QASKPIPTVEKP------QPRSQPQPQPQAAPLANSLNAGELERKTKSLLEEYFSIRLVD 601
Query: 218 ESL 220
E+L
Sbjct: 602 EAL 604
>At5g64910.1 68418.m08165 expressed protein ; expression supported
by MPSS
Length = 487
Score = 31.1 bits (67), Expect = 2.9
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 685 KNDDVVVAPETTADKPVSELPNENKTVDTENNDESKANEQTGDMAEEAKD 734
KNDD VV TT + ++ +T +TE+ ES A E+ G EEA +
Sbjct: 29 KNDDAVVEATTTQETQPTQ-----ETEETEDKVESPAPEEEGKNEEEANE 73
>At3g54760.1 68416.m06059 dentin sialophosphoprotein-related
contains weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor (Dentin phosphophoryn DPP,
Dentin sialoprotein DSP) [Homo sapiens]
Length = 792
Score = 31.1 bits (67), Expect = 2.9
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 686 NDDVVVAPETTADKPVSELPN-ENKTVDTENNDESKANEQTGDMAEEAKDVISNLKSEVP 744
N+ + T D P++E N E+ V DE K N DM + I + S +P
Sbjct: 256 NESAGASMVQTQDVPIAEADNNESNVVKKMEIDERKDN---ADMTSDLTGTIESADSAIP 312
Query: 745 ATPTRSSA 752
+PT +A
Sbjct: 313 NSPTEDAA 320
>At3g28830.1 68416.m03597 expressed protein
Length = 539
Score = 31.1 bits (67), Expect = 2.9
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Query: 126 SGNARGSDSQFNFRSGRRSAN-RFQGQGSSKRQPAAEPQFSNKGPGRSSTDRPKSGKVTK 184
SG+ + S S SG+ S+ QGS+ Q +A Q S G +S R +SG +
Sbjct: 282 SGSPKASPS--GSVSGKSSSKGSASAQGSASAQGSASAQGSASAQGSASAQRRESGAMAM 339
Query: 185 AKTSLPPNKLNTYSISERNNLVKKTTSAAKKVDES 219
+K+ S S + TT+ K ES
Sbjct: 340 SKSRETKTSSQRQSKSSSESSSSSTTTTTVKQVES 374
>At1g24764.1 68414.m03106 expressed protein
Length = 607
Score = 31.1 bits (67), Expect = 2.9
Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 14/156 (8%)
Query: 107 NSRKRSYQPDWETNPNKRFSGNARGSDSQFNFRSGRRSANRFQGQGSSKRQPAAEPQFSN 166
+S++R +P ++ + F GSD + NR + + K + E
Sbjct: 48 SSKRRPIRPSFDAAADNEFITLLHGSDPV------KVELNRLENEVRDKDRELGEANAEI 101
Query: 167 KGPGRSSTDRPKS-GKVTKAKTSLPPNKLNTYSISERNNLV-------KKTTSAAKKVDE 218
K S R K+ ++T+ T L T SI E NL KK + AA+ E
Sbjct: 102 KALRLSERQREKAVEELTEELTKLDEKLKLTESILESKNLEIKKINEEKKASMAAQFAAE 161
Query: 219 SLILRPNCPMSNQLQGRLELVMGHLLKELKTKFSEV 254
+ + R + + +E ++ L ELK SE+
Sbjct: 162 ATLRRVHAAQKDDDMPPIEAILAPLEAELKLARSEI 197
>At5g64200.2 68418.m08063 arginine/serine-rich splicing factor SC35
contains similarity to splicing factor; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 303
Score = 30.7 bits (66), Expect = 3.8
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Query: 108 SRKRSYQPDWETNPNKRFSGNARGSDSQFNFRSGRRSANRFQGQGSSKRQPAAEPQFSNK 167
+R RS PD + R+ +R + RRS Q +S + + + SN+
Sbjct: 184 TRSRSASPDEKRRVRGRYDNESRSHSRSLSASPARRSPRSSSPQKTSPAREVSPDKRSNE 243
Query: 168 ---GPGRSSTDR-PKSGKVTKAKTSLPPNKLNTYSISERNNLVKKTTSAAKK 215
P RS + R P K + +K P + N S S + + AA +
Sbjct: 244 RSPSPRRSLSPRSPALQKASPSKEMSPERRSNERSPSPGSPAPLRKVDAASR 295
>At5g64200.1 68418.m08062 arginine/serine-rich splicing factor SC35
contains similarity to splicing factor; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 303
Score = 30.7 bits (66), Expect = 3.8
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Query: 108 SRKRSYQPDWETNPNKRFSGNARGSDSQFNFRSGRRSANRFQGQGSSKRQPAAEPQFSNK 167
+R RS PD + R+ +R + RRS Q +S + + + SN+
Sbjct: 184 TRSRSASPDEKRRVRGRYDNESRSHSRSLSASPARRSPRSSSPQKTSPAREVSPDKRSNE 243
Query: 168 ---GPGRSSTDR-PKSGKVTKAKTSLPPNKLNTYSISERNNLVKKTTSAAKK 215
P RS + R P K + +K P + N S S + + AA +
Sbjct: 244 RSPSPRRSLSPRSPALQKASPSKEMSPERRSNERSPSPGSPAPLRKVDAASR 295
>At1g01260.1 68414.m00043 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 590
Score = 30.7 bits (66), Expect = 3.8
Identities = 21/104 (20%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Query: 136 FNFRSGRRSANRFQGQGSSKRQPAAEPQFSNKGPGRSSTDRPKSGKVTKAKTSLPPNKLN 195
F+ S R S N G+G + A S R RP +G+ +A + +
Sbjct: 383 FSAASSRASENNSDGEGGGEWADAVGADESGNNRPRKRGRRPANGR-AEALNHVEAERQR 441
Query: 196 TYSISERNNLVKKTTSAAKKVDESLILRPNCPMSNQLQGRLELV 239
+++R ++ K+D++ +L N+L +L+++
Sbjct: 442 REKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVM 485
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 884
Score = 30.3 bits (65), Expect = 5.1
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 686 NDDVVVAPETTADKPVSELPNENKTVDTENNDESKANEQTGDMAEEAKDVISNLKSEV 743
+DDV+ P T AD+P + + + + D E DE A +T ++ E K +++ + +V
Sbjct: 433 DDDVLYKPPTKADQPDKKSFSPSNSSDEEEEDEMDA-ARTTEINMEIKRILTEVLLKV 489
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 30.3 bits (65), Expect = 5.1
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 686 NDDVVVAPETTADKPVSELPNENKTVDTENNDESKANEQTGDMAEEAKDVISNLKSEV 743
+DDV+ P T AD+P + + + + D E DE A +T ++ E K +++ + +V
Sbjct: 420 DDDVLYKPPTKADQPDKKSFSPSNSSDEEEEDEMDA-ARTTEINMEIKRILTEVLLKV 476
>At1g30470.1 68414.m03724 SIT4 phosphatase-associated family protein
contains similarity to copper chaperone homolog CCH
GB:AAF15286 GI:6525011 from [Glycine max]; contains Pfam
profile PF04499: SIT4 phosphatase-associated protein
Length = 811
Score = 30.3 bits (65), Expect = 5.1
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 686 NDDVVVAPETTADKPVSELPNENKTVDTENNDESKANEQTGDMAE-EAKDVISNLKSEVP 744
N V P D+ +LP+E+ TEN+ ++ E T + +V NL+ P
Sbjct: 709 NKSAVKTPGVPGDETTEKLPDESGVEPTENSPKASGIEPTESSPKASGAEVTGNLRDSDP 768
Query: 745 A 745
A
Sbjct: 769 A 769
>At4g02430.2 68417.m00330 pre-mRNA splicing factor, putative / SR1
protein, putative strong similarity to SP|O22315
Pre-mRNA splicing factor SF2 (SR1 protein) {Arabidopsis
thaliana}; cDNA NCBI_gi:15810292 supports a truncated
version while protein evidence supports a longer model.
Length = 278
Score = 29.9 bits (64), Expect = 6.7
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 89 DYTRYYDESVGSGDFIPLNSRKRSYQPDWETNPNKRFSGNARG---SDSQFNFRSGRRSA 145
DYT Y D D N+ Y E + + +RG S S+ RS RS
Sbjct: 163 DYTSYEDMKYALDDTEFRNAFSHEYVRVREYDSRRDSRSPSRGRSYSKSRSRGRSPSRSR 222
Query: 146 NRFQGQGSSKRQPAAEPQFSNKGPGRSSTDRPKSGKVTKAKTSLP 190
+R + + S R P A+ + P +S++ P+S +K+++ P
Sbjct: 223 SRSRSR-SKSRSPKAKS--LRRSPAKSTSRSPRSRSRSKSRSLSP 264
>At2g43970.2 68415.m05468 La domain-containing protein contains Pfam
profile PF05383: La domain
Length = 529
Score = 29.9 bits (64), Expect = 6.7
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 87 DSDYTRYYDESVGSGDFIPLNSRKRSYQPDWETNPNKRFSGNARGSDSQFNFRSGRRSAN 146
D+D D++ S + P+ + +W+T+ ++ G +G++ R GR N
Sbjct: 383 DADVEHEEDDATTS-EQQPIEKQSDDCSGEWDTHMQEQPIGEDQGNEKAAGQRKGR---N 438
Query: 147 RFQGQGSSKRQP 158
R +G+G + QP
Sbjct: 439 RGRGKGRGRGQP 450
>At2g43970.1 68415.m05467 La domain-containing protein contains Pfam
profile PF05383: La domain
Length = 545
Score = 29.9 bits (64), Expect = 6.7
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 87 DSDYTRYYDESVGSGDFIPLNSRKRSYQPDWETNPNKRFSGNARGSDSQFNFRSGRRSAN 146
D+D D++ S + P+ + +W+T+ ++ G +G++ R GR N
Sbjct: 399 DADVEHEEDDATTS-EQQPIEKQSDDCSGEWDTHMQEQPIGEDQGNEKAAGQRKGR---N 454
Query: 147 RFQGQGSSKRQP 158
R +G+G + QP
Sbjct: 455 RGRGKGRGRGQP 466
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.9 bits (64), Expect = 6.7
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 696 TADKPVSELPNENKTVDTENND--ESKANEQTGDMAEEAKDVISNLKSE 742
T DK S E+K +TE + ES + E+T D EAK+ + + E
Sbjct: 435 TKDKEESSSQEESKDRETETKEKEESSSQEETMDKETEAKEKVESSSQE 483
>At1g07980.1 68414.m00869 histone-like transcription factor
(CBF/NF-Y) family protein contains Pfam profile PF00808:
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to Chromatin accessibility
complex protein 1 (CHRAC-1) (CHRAC-15) (HuCHRAC15) (DNA
polymerase epsilon subunit p15) (SP:Q9NRG0) {Homo
sapiens}
Length = 206
Score = 29.9 bits (64), Expect = 6.7
Identities = 44/194 (22%), Positives = 82/194 (42%), Gaps = 14/194 (7%)
Query: 155 KRQPAAEPQFSNKGPGRSSTDRPKSGKVTKAKTSLPPNKLNTYSISERNNLVKKTTSAAK 214
K + A NK GRS K T K ++ K Y ISE ++ + A
Sbjct: 8 KEKKARSDVVVNKASGRSKRSSGSRTKKTSNKVNIVKKKPEIYEISESSS--SDSVEEAI 65
Query: 215 KVDESLILRPNCPMSNQLQGRLELVMGHLLKELKTKFSEVEAYRDTIQSPLAQRTVKQIL 274
+ DE+ + N +S + G+ +G K K + E + + + +++I+
Sbjct: 66 RGDEA--KKSNGVVSKRGNGK---SVGIPTKTSKNR-EEDDGGAEDAKIKFPMNRIRRIM 119
Query: 275 R-DRIKELMMNKYIGGINDGLTVYRKRYPEGTDEALLEEVKQAKEELNVKNPDNKLIQSD 333
R D +M + +N ++ +R+ E EA VK K+ ++ K+ + ++ +D
Sbjct: 120 RSDNSAPQIMQDAVFLVNKATEMFIERFSE---EAYDSSVKDKKKFIHYKHL-SSVVSND 175
Query: 334 DPEAFLEKNL-EKL 346
FL ++ EKL
Sbjct: 176 QRYEFLADSVPEKL 189
>At5g63420.1 68418.m07962 metallo-beta-lactamase family protein
Length = 911
Score = 29.5 bits (63), Expect = 8.9
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 684 EKNDDVVVAPETTADKPV-SELPNENKTVDTENNDESKANEQTGDMAEEAKD 734
E++DD + + P SE N NK DTE E K N + D +A D
Sbjct: 755 EESDDFWKSFINPSSSPSPSETENMNKVADTEPKAEGKENSRDDDELADASD 806
>At5g62550.1 68418.m07850 expressed protein
Length = 487
Score = 29.5 bits (63), Expect = 8.9
Identities = 24/101 (23%), Positives = 40/101 (39%)
Query: 118 ETNPNKRFSGNARGSDSQFNFRSGRRSANRFQGQGSSKRQPAAEPQFSNKGPGRSSTDRP 177
E + + SGN+ S ++ RS RS +S+T
Sbjct: 6 EKSVSSAASGNSINSKLRYPLRSALRSKEGKPPVPDFSASSMPRRARVVSAVSQSTTVLD 65
Query: 178 KSGKVTKAKTSLPPNKLNTYSISERNNLVKKTTSAAKKVDE 218
SGK + +T LPP +L+ + N+ VK +S+ + E
Sbjct: 66 LSGKKSVDRTKLPPRRLSIPNKPTSNSSVKSVSSSVTSLSE 106
>At5g10500.1 68418.m01216 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 848
Score = 29.5 bits (63), Expect = 8.9
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 680 KVPVEKNDDVVVAPETTADKPVSELPNENKTVDTENNDESKANEQTGDMA-EEAKDVISN 738
K P E DD VV+ K SE+ K + E N E +T + + + + IS+
Sbjct: 467 KFPEENIDDTVVSENALDIKSASEVVFAEKDLSDEVNQEEAIETKTKEASLSDLEKHISS 526
Query: 739 LKSEVPATPTRS 750
KS++ T S
Sbjct: 527 PKSDIITTQESS 538
>At5g07820.1 68418.m00896 expressed protein
Length = 561
Score = 29.5 bits (63), Expect = 8.9
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 292 DGLTVYRKRYPEGTDEALLEEVKQAKEELNVKNPDNKLIQSDDPEAFLEKNLEKLIHSKL 351
DGL V +K + T ++ V+ K+ V N +++ Q+ P+ L KNL+ K+
Sbjct: 151 DGLHV-KKSETKSTSPSVSPVVRTVKKTNLVVNKASRISQNKSPKEDLSKNLKNKEKGKI 209
Query: 352 VE 353
VE
Sbjct: 210 VE 211
>At4g12910.1 68417.m02019 serine carboxypeptidase S10 family protein
SERINE CARBOXYPEPTIDASE I PRECURSOR - Hordeum vulgare,
SWall:CBP1_HORVU
Length = 484
Score = 29.5 bits (63), Expect = 8.9
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 154 SKRQPAAEPQ--FSNKGPGRSSTDR------PKSGKVTKAKTSLPPNKLNTYSISERNNL 205
S++ P+ +P + N GPG SS D P + ++ K SLP LN YS S+ +N+
Sbjct: 71 SEKNPSKDPVVLWLNGGPGCSSMDGFVYEHGPFNFELPKKNNSLPLLHLNPYSWSKVSNI 130
Query: 206 V 206
+
Sbjct: 131 I 131
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 29.5 bits (63), Expect = 8.9
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 139 RSGRRSANRFQGQGSSKRQPAAEPQFSNKGPGRSSTDRPKSGKVTKAKTSLPPNKLNTYS 198
R RR +G+ ++++ A E S + ++ R K K TK K + N T+
Sbjct: 446 RPSRRKEKPSRGEIEAEKEVAIEAAKSTELKNKTK-GRNKPSKRTKKKKEMVENAKRTFP 504
Query: 199 ISERNNLVKK 208
E N +KK
Sbjct: 505 EQEHNTAIKK 514
>At1g68920.2 68414.m07888 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 485
Score = 29.5 bits (63), Expect = 8.9
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 119 TNPNKRFSGNARGSDSQFNFRSGRRSANRFQGQGSSKRQPAAEPQFSNKGP--GRSSTDR 176
T KR N+ + S + +S N + + ++ P + + SN G G+ S+D
Sbjct: 235 TKKRKRNGQNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDP 294
Query: 177 PKSGKV-TKAKTSLPPNKLNTYSISER 202
PK G + +A+ N++S++ER
Sbjct: 295 PKDGYIHVRARRG---QATNSHSLAER 318
>At1g33500.1 68414.m04146 hypothetical protein
Length = 254
Score = 29.5 bits (63), Expect = 8.9
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 202 RNNLVKKTTSAAKKVDESLILRPNCPMSN-QLQGRLELVMGHLLKELKTKFSEVE 255
RNNL++ + SA K+D++ ++R N N +++ +E V H + E K + V+
Sbjct: 149 RNNLMELSDSARAKLDQAKLMRSNLLQENSKIKLSIENVK-HKINEFKPELMSVD 202
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.310 0.128 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,886,353
Number of Sequences: 28952
Number of extensions: 583135
Number of successful extensions: 1955
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1925
Number of HSP's gapped (non-prelim): 60
length of query: 777
length of database: 12,070,560
effective HSP length: 87
effective length of query: 690
effective length of database: 9,551,736
effective search space: 6590697840
effective search space used: 6590697840
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 63 (29.5 bits)
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