Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000101-TA|BGIBMGA000101-PA|IPR002048|Calcium-binding
EF-hand
         (1694 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    29   0.78 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    28   1.8  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    28   2.4  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    28   2.4  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    27   5.5  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            26   9.7  

>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 29.5 bits (63), Expect = 0.78
 Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 6/128 (4%)

Query: 373 QNSRDHEANRPNSQTQLCARPPAEPEWDIDRMNDPMMNPKRDKAVEAIVSTILKKHQYLA 432
           Q  RD E+ +  +   L +  P     ++ R   P+  PKR  +V  + S I+   QY A
Sbjct: 457 QTYRDLESEKQKTDRLLYSVLPKTVANEL-RHQRPVA-PKRYDSVTLMFSGIVGFGQYCA 514

Query: 433 ECGDEERIRVIEELKNELGQLFIDMFGDRDISYI----EIMIKYKAKFGDKDEEVMIENV 488
              D E    I ++ NEL  +F ++   +  S I     +  KY A  G  DE       
Sbjct: 515 ANTDPEGAMKIVKMLNELYTIFDELTDSKSNSNIYKVETVGDKYMAVSGLPDECENHAKC 574

Query: 489 LSKLSIEM 496
           +++L+++M
Sbjct: 575 IARLALDM 582


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
            transcription factor FRU-MB protein.
          Length = 759

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 12/18 (66%), Positives = 13/18 (72%)

Query: 1644 LGTEKSDFPTLPNKSDGA 1661
            LGT KSDFP +PN S  A
Sbjct: 618  LGTFKSDFPPIPNSSAAA 635


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 411 PKRDKAVEAIVSTILKKHQYLAECGDEERIRVIEELKNE-LGQLFIDMFGDR 461
           PK +  +E I+   +K HQ L + G  ER R+ + L NE + + F  ++G++
Sbjct: 376 PKSNPPLEVILLQTIK-HQILHKLGLRERPRLTKHLNNEHVFEAFDRIYGNK 426


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 411 PKRDKAVEAIVSTILKKHQYLAECGDEERIRVIEELKNE-LGQLFIDMFGDR 461
           PK +  +E I+   +K HQ L + G  ER R+ + L NE + + F  ++G++
Sbjct: 376 PKSNPPLEVILLQTIK-HQILHKLGLRERPRLTKHLNNEHVFEAFDRIYGNK 426


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 4/83 (4%)

Query: 797 KWKLVKQIVNVKGTRLYVDLSPTSARMLARYKMKLSYELQKVDVY--LKASAVDKD-TFD 853
           KW+++   +N     + +DL   S R L+R     S +    D++  +  +AVD + T  
Sbjct: 188 KWEVLSSYMNSDHRAIRIDLETQSVRNLSRPITGWSIKYFSKDIFEVMMQAAVDTEVTTS 247

Query: 854 AGLKEKSVTDRNLIM-KTARTTP 875
             L    VT  N  M K  R TP
Sbjct: 248 EDLMRILVTACNATMTKRKRYTP 270


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 281  GRSDFYEGIQHPPP-GSFRSNVDPQTNDYREPNSSTRSSKESFQFQRMQRPSSEMQEGP 338
            GRS  Y   Q P P     S + PQ     +     +  ++  Q Q+ Q+   + Q  P
Sbjct: 1270 GRSTDYHATQQPLPLPGLASEMQPQQLHRSQQQQQQQQQQQQQQQQQQQQQQQQQQHQP 1328


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.131    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,632,689
Number of Sequences: 2123
Number of extensions: 65748
Number of successful extensions: 126
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 123
Number of HSP's gapped (non-prelim): 7
length of query: 1694
length of database: 516,269
effective HSP length: 74
effective length of query: 1620
effective length of database: 359,167
effective search space: 581850540
effective search space used: 581850540
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 54 (25.8 bits)