Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000101-TA|BGIBMGA000101-PA|IPR002048|Calcium-binding
EF-hand
(1694 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.15
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 33 0.26
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 33 0.26
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 33 0.34
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 33 0.45
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 33 0.45
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 33 0.45
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 33 0.45
SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 32 0.79
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 30 2.4
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 30 2.4
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 30 3.2
SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr... 30 3.2
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 30 3.2
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 29 4.2
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 29 4.2
SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6 |Schizosaccharo... 29 4.2
SPBC31E1.04 |pep12||SNARE Pep12|Schizosaccharomyces pombe|chr 2|... 29 4.2
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 29 5.6
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 29 5.6
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 29 5.6
SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces pomb... 29 5.6
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 29 5.6
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 29 7.4
SPCC1450.13c |||riboflavin synthase |Schizosaccharomyces pombe|c... 29 7.4
SPBC32F12.06 |pch1||cyclin Pch1|Schizosaccharomyces pombe|chr 2|... 29 7.4
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 29 7.4
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 29 7.4
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 28 9.8
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 9.8
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.3 bits (75), Expect = 0.15
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 294 PGSFRSNVDPQTNDYREP-NSSTRSSKESFQFQRMQRPSSEMQEGPRWSKGRDEHRNDFG 352
P TND P +SS+ S++ + Q Q PS + +E P S+ ++
Sbjct: 463 PAKSSEEAKSTTNDSSPPKDSSSTSTQPTEQSNAQQAPSPKEEERPLPSEPSQNQPAEYR 522
Query: 353 DAYKKNRDLSSVPGLRSID 371
D R++ +PGL S D
Sbjct: 523 DTPDTPRNIMPLPGLMSAD 541
Score = 28.3 bits (60), Expect = 9.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 1652 PTLPNKSDGAINEKSDDELSDSE 1674
P P KS G I+E+ +DE D+E
Sbjct: 350 PQKPGKSQGEISEQEEDEYDDAE 372
>SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1079
Score = 33.5 bits (73), Expect = 0.26
Identities = 30/154 (19%), Positives = 64/154 (41%), Gaps = 8/154 (5%)
Query: 1347 DGKQRRTMIGRTENRKVINTAVPFKDKIDDRPKVTAKTRKTETLTRDTKSAEAKHDITAL 1406
D Q + ++EN V + K K + K K + ++ +++ +S + ++TA+
Sbjct: 34 DSPQNDELAEKSENLAVSSEKTTSKKKKGKKNKGN-KNQVSDDESQELESPQGPKELTAV 92
Query: 1407 SNSTVSKLDVSKSKSNTTVIKVGNKVINIKESTDRREKQGVDDPKPIVSINEVAKTKSN- 1465
+ + D K K G K ++E + +E + PK + ++ E+ + +
Sbjct: 93 TELDDDEFDYKPKKG-----KKGKKSKKVEEDDEPQEIESPQGPKELTAVTELDDDEFDY 147
Query: 1466 -TTKNEVGNKAVKINVPTNRTEKTLPQSKQTTKR 1498
K + G KA N +P+ + TK+
Sbjct: 148 KPKKGKKGKKAQNNNESEAAAPPEIPEVRVKTKK 181
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 33.5 bits (73), Expect = 0.26
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 1377 RPKVTAKTRKTETLTRDTKSAEAKHDITALSNSTVSKLDV-SKSKSNTTVIKVGN--KVI 1433
+P T+ K E ++ D +ALSNS DV ++S V+ + N K+
Sbjct: 344 KPTDTSPLHKIEPISADELVESDDSRTSALSNSQNPSDDVENQSDQALEVLSLTNPPKID 403
Query: 1434 NIK-ESTDRREKQGVDDPKPIVSINEVAKTKSNTTKNEVGNKAVKINVPTNRTEKT---- 1488
N ++T +E +D K VS N+ ++ + G A+K P N+ EK+
Sbjct: 404 NASADTTLHKETNKID--KLYVSENKAESAVASESSLSEGTLALKAPAPENKPEKSSTSK 461
Query: 1489 --LPQSK---QTTKRSNIDED---NLFAKRP-ITMTTTXXXXXXXXXXXXXXXIQELLLR 1539
+P++K +S++ ED N A +P T ++L+
Sbjct: 462 PPVPENKAEDSVVLKSSVPEDKSENSIASKPSATEGIPENAIALQSSVPENKAEDSVVLK 521
Query: 1540 SIILDECGGPDKKIPDKQS-LEVERENELRMKK 1571
S + ++ + +P K S LE + EN + + K
Sbjct: 522 SSVPED--KSEDSVPSKSSVLEDKHENSVEIDK 552
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 33.1 bits (72), Expect = 0.34
Identities = 22/104 (21%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 817 SPTSARMLARYKMKLSYELQKVDVYLKASAVDKDTFDAGLKEKSVTDRNLIMKTARTTPM 876
+PTS R++ R +KL+ L++ L + ++ D DA ++ + ++ R TPM
Sbjct: 135 APTSKRVVNR-GLKLNTNLRQASPILPSPSLKLDRQDAPIQINHEQKEDFLVSIPRPTPM 193
Query: 877 PVIQNGPSVVKITLDRTRYLTPGQTFKLREIVIYHLFRYLEHGG 920
+ +G + +Y+ P + + + Y+ +GG
Sbjct: 194 TNLDDGKDEIGQPDPHRKYMAPPRVNSISR--VQRRMSYIPYGG 235
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 32.7 bits (71), Expect = 0.45
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 277 NSLGGRSDFYEGIQHPPP--GSFRSNVDPQTNDYREPNSSTRSSKESFQFQRMQRPSSEM 334
N+ S Y HPPP G N PQT+D++ N + SS FQ + S +
Sbjct: 676 NNQSYSSSPYSVFSHPPPYMGRQSLNDSPQTSDFKASNLNDSSSNVHSIFQTRETTSPSV 735
Query: 335 Q 335
Q
Sbjct: 736 Q 736
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 32.7 bits (71), Expect = 0.45
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Query: 1377 RPKVTAKT-RKTETLTRDTKSAEAKH-DITALSNSTV---SKL---DVSKSKSNTTVIKV 1428
RP A+T R + R+ ++ + +++A SNSTV S L VS++ T ++
Sbjct: 281 RPVSAAQTVRPGSRIFRENSASNTQRPNVSATSNSTVRVASSLAVRPVSRNAQARTPSRL 340
Query: 1429 GNKVINIKESTDRREKQGVDDPKPIVSINEVAKT-KSNTTKNEVGNKAVKINVPTNRTEK 1487
+ +N+K S+ + + G + S + + T S TT V KA I P++ +
Sbjct: 341 EQREVNVKNSSAKIVRPGTS--LGVRSPSRIQSTLSSRTTTGNVRTKAANIVRPSSSINR 398
Query: 1488 TLPQSKQTTKRSNI 1501
P S SN+
Sbjct: 399 RPPSSINQRPPSNL 412
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 32.7 bits (71), Expect = 0.45
Identities = 39/174 (22%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 1337 KRPPYPKTVFDGKQRRTM-IGRTE----NRKVINTAVPFKDKIDDRPKVTAKTRKTETLT 1391
+RPP ++ K+ T G T+ V T P KD + TE+ T
Sbjct: 92 RRPPRQISIDSAKKEETKNTGSTKAADTKSSVEATISPLKDTKSPSNASVFPIKPTESKT 151
Query: 1392 RDTKSAEAKHDITALSNSTVSKLDVSKSKSNTTVIKVGNKVINIKESTDRREKQGVDDPK 1451
TK +E + S+ST ++ + SK+++ + + ++DR G P+
Sbjct: 152 STTKDSETAKEEDDASSSTTKAVEATTSKASSAHT---DTLATSASNSDR----GASTPE 204
Query: 1452 PIVSINEVAKTKSNTTKNEVGNKAVKINVPTNR---TEKTLPQSKQTTKRSNID 1502
+V + + S + + + A +I N K LPQ+ +T+ N+D
Sbjct: 205 MVVKAEKREGSTSPIPYSSL-SIAERIKQAQNTPFLESKVLPQNNETSDEENVD 257
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 32.7 bits (71), Expect = 0.45
Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 6/149 (4%)
Query: 1350 QRRTMIGRTENRKVINTAVPFKDKIDDRPKVTAKTRKTETLTRDTKSAEAKHDITALSNS 1409
++ I E + N++ D IDD K + E L ++ + + K
Sbjct: 1616 EKSQRIKELEEQAQKNSSENTHDNIDDM----IKQQVEEKLKENSANFDVKLKKVVAETE 1671
Query: 1410 TVSKLDVSKSKSNTTVIKVGNKVINIKESTDRREKQGVDDPKPIVSINEVAKTKSNTTKN 1469
SK +S + T ++ NK+ ++E+ + KQ + K S + V +TK T+K
Sbjct: 1672 FRSKAKISVYEKKTRDLQ--NKITQLEETIENLNKQLSNPEKTDESTSSVTETKPVTSKP 1729
Query: 1470 EVGNKAVKINVPTNRTEKTLPQSKQTTKR 1498
V N + K P K + R
Sbjct: 1730 TASKADVGQNATEASSAKREPSGKSLSAR 1758
>SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1317
Score = 31.9 bits (69), Expect = 0.79
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 1214 NQNRTTFEEL-YRKPYVQVRKAVEDQPRATPNDVSELPTQMSKTVDG 1259
NQ+R EL R+P V K +E R T D E P ++ T+DG
Sbjct: 109 NQSRPNIFELGIRRPEVLYSKVIEVDERVTLEDYVEDPMKVKTTIDG 155
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 1170 PSQDYRLYRSNRRESEKKLKENQRNDVRDNIRRVAVINRNKNAVNQNRTT 1219
P+ D + R NRR E++L ++Q+N R R A N N + TT
Sbjct: 895 PTGDEAIDRRNRRRLEQELAKSQKNWERRRARHAAKEGINLNGEGRKPTT 944
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 30.3 bits (65), Expect = 2.4
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 1/108 (0%)
Query: 1393 DTKSAEAKHDITALSNSTVSKLDVSKSKSNTTVIKVGNKVINIKESTDRREKQGVDDPKP 1452
+++ K + TA + S S D K+ + V+K I + E + ++ P P
Sbjct: 346 ESEPVAGKENETAKNESGASDND-HKANVHVFVLKSSEDAITLNEEKIATQDDPLEAPTP 404
Query: 1453 IVSINEVAKTKSNTTKNEVGNKAVKINVPTNRTEKTLPQSKQTTKRSN 1500
IV+ + SN +E+ + P + T T T SN
Sbjct: 405 IVASSSTIFLNSNQRNDELSASGSQEPHPKDGTNSTSSLPLDTNNLSN 452
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 29.9 bits (64), Expect = 3.2
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 9/104 (8%)
Query: 97 IPRPEREKSMSGPHVMQPPGPTQPGYTNVDNKNVRFPPFVRTNNPYEQYMENNPASSQAR 156
+P+ + + V+Q P TQP +V N NV P + + P + P+S A
Sbjct: 747 LPQAQLPSATGQSGVVQQPYQTQP---SVTNNNVATQPVIASTVPVQTAA---PSSQTAV 800
Query: 157 PQHIQSQETIQPMYSGGYPSSHKGNASQPAWGPVQKTSWQQETK 200
PQ I P G +S N+ P K S Q ++
Sbjct: 801 PQTIHQSNAFTPR---GKHASGSRNSISSTKSPQHKLSDQPRSR 841
>SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr
2|||Manual
Length = 539
Score = 29.9 bits (64), Expect = 3.2
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 1161 RRDRFDRPGPSQDYRLYRSNRRESEKKLKENQRNDVRDNIRRVAVINRNKNAVNQNRTTF 1220
RR RF G + L R R E + ++++ +R + + RN NAV QN
Sbjct: 9 RRSRFKSKGVFKADEL-RRQREEQQIEIRKQKREESLNK-------RRNLNAVLQNDIDV 60
Query: 1221 EELYRKPYVQVRKAVEDQ-PRATPNDVSE 1248
EE + VQ+ + ++D+ P+ T + +S+
Sbjct: 61 EEEADQSQVQMEQQMKDEFPKLTADVMSD 89
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 29.9 bits (64), Expect = 3.2
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 402 DRMNDPMMNPKRDKAVEAIVSTILKKHQYLAECGDEERIRVIEELKNELGQLFI-DMFGD 460
D +N P + K ++ VEA+ + K Q + E I IEE E+ ++ + D F D
Sbjct: 751 DDINSPKLQSKNNQTVEAVNTETSDKLQEKEANHELENIEKIEEKLTEVDKVSLSDAFPD 810
Query: 461 RDI 463
++I
Sbjct: 811 QEI 813
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 29.5 bits (63), Expect = 4.2
Identities = 22/120 (18%), Positives = 52/120 (43%), Gaps = 4/120 (3%)
Query: 1555 DKQSLEVERENELRMKKINVDTEAKPYLSTGKSLAXXXXXXXXXXXXIKAMLSEIIVIDE 1614
D +S++ EN L ++ ++ + + + ++ SE+ V +
Sbjct: 13 DAESVDSSEENRLTSSRLKKQDDSSSEEESSEEESASSSESESSEEESESEESEVEVPKK 72
Query: 1615 CGLADMKPKETSKKTNEEQIGVKVKTDSKLGTEKSDFPTLPNKSDGAINEKSDDELSDSE 1674
+A + E+ +++EE+ +T+S+ +E SD ++S+ E+S+ E E
Sbjct: 73 KAVAASEDSESDSESSEEE----EETESEEDSEVSDESESESESESESEEESESEEESDE 128
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 1618 ADMKPKETSKKTNEEQIGVKVKTDSKLGTEKSDFPTLPNKSDGAINEKSDDELSDSEIRA 1677
+D + ++S++ +K + DS E S+ + + + E+S+ E +SE+
Sbjct: 12 SDAESVDSSEENRLTSSRLKKQDDSSSEEESSEEESASSSESESSEEESESE--ESEVEV 69
Query: 1678 MLAESVVLDECGESDSE 1694
++V E ESDSE
Sbjct: 70 PKKKAVAASEDSESDSE 86
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 29.5 bits (63), Expect = 4.2
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 1198 DNIRRVAVINRNK-----NAVNQNRTTFEELYRKPYVQVRKAVEDQPRATPNDVSELPTQ 1252
D IRR+ NK A N+ F + R V +RK +E ++ N +SE PT
Sbjct: 465 DRIRRLQAFFANKPTSEQTAQQDNKALFVKPERSSTVTIRKPIE----SSTNKISENPTT 520
Query: 1253 MSKTVDGE 1260
+S V+ +
Sbjct: 521 LSSKVENK 528
>SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 479 KDEEVMIENVLSKLSIEMRCLKRSAPEQLT---PTMSEAANDALVGHKKRNFTVVPDWQL 535
+ E + I N S+ + C + +L T++EAAN +L G KK+ V+ D L
Sbjct: 593 RKERLFIVNQNIPFSLTLPCTQGHVESELNVKQSTVTEAANPSLNGEKKQEPIVIRDLGL 652
Query: 536 N 536
N
Sbjct: 653 N 653
>SPBC31E1.04 |pep12||SNARE Pep12|Schizosaccharomyces pombe|chr
2|||Manual
Length = 317
Score = 29.5 bits (63), Expect = 4.2
Identities = 22/107 (20%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 1398 EAKHDITALSNSTVSKLDVSKSKSNTTVIKVGNKVINIKESTDRREKQGVDDPKPI---- 1453
E + +++ +NS+ + +++SK + + ++ ++IN ++ QG+++ I
Sbjct: 137 EEERNVSLSNNSSGQRQPLTESKISNSQLEYQQRLINERQGEIENLTQGINELNEIFRDL 196
Query: 1454 -VSINEVAKTKSNTTKNEVGNKAVKINVPTNRTEKTLPQSKQTTKRS 1499
INE + +N N VGN + + + + S++ KRS
Sbjct: 197 STIINEQGELVTNIEYN-VGNTSTNTKNASRQLQIANEHSRKARKRS 242
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 29.1 bits (62), Expect = 5.6
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 97 IPRPEREKSMSGPHVMQPPGPTQPGYTNVDNKNVRFPPFVRTNNPYEQYMENNPASSQAR 156
+P P+ S +G G +++D+ V ++ QY ENNP S
Sbjct: 141 VPPPQFFHSEAGERPTPSVGAPSSLASSMDSVRVAPSMLAASHQIVPQYSENNPRVSNEP 200
Query: 157 PQHIQSQETIQPMYSGGYPSSHKGNAS 183
P+ +++P GY SH ++
Sbjct: 201 PRVTIENASLKPF--SGYIKSHMSTSN 225
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 29.1 bits (62), Expect = 5.6
Identities = 24/112 (21%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 1407 SNSTVSKLDVSKSKSNTTVIKVGNKVINIKESTDRREKQGVDDPKPIVSINEVAKTKSNT 1466
S T + + ++K N I+ +E T+RR+ G K + K +
Sbjct: 607 SLKTTTDVSSPETKQNIADIRKTTLTDQTEEFTERRDNNGSIPSKQPSDEQHLGKESLPS 666
Query: 1467 TKNEVGNKAVKINVPTNR-------TEKTLPQSKQTTKRSNIDEDNLFAKRP 1511
++ V N K ++P+ + +++LP S+QTT+ ++ +++ +K+P
Sbjct: 667 QQSTVSNHHRKESIPSKQPTEGQHARQESLP-SQQTTETKHLRKESTPSKQP 717
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 29.1 bits (62), Expect = 5.6
Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 13/122 (10%)
Query: 310 EPNSSTRSSKESFQFQRMQR--PSSEMQEGPRWSKGRDEHRNDFGDAYKKNRDLSSVPGL 367
E + S +++ F R+ PS + G R +K HRND G++ NRD ++
Sbjct: 24 ESENINDSDRQNSGFSRLWNRFPSLQRVLGLRRAK---RHRNDEGNSENGNRDRTTE--- 77
Query: 368 RSIDHQNSRDHEANRPNSQTQLCARPPAEPEWDIDRMNDPMMNPKRDKAVEAIVSTILKK 427
RS R NR NS + PPA P R+ + A+ IL+
Sbjct: 78 RSAFRSRYRGSLLNR-NSPSLRSLSPPATPATPRSRIE----GESQTSAIPQTDRLILEN 132
Query: 428 HQ 429
HQ
Sbjct: 133 HQ 134
>SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 29.1 bits (62), Expect = 5.6
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 16/125 (12%)
Query: 99 RPEREKSM-SGPHVMQPPGPTQPGYTNVDNKNVRFPPFVRTNN----PYEQYMENNPASS 153
R + KSM SG + P + + +++ NVR PF +TN P +++ + P+SS
Sbjct: 381 RKRKAKSMVSGNQAL----PGEANFQSLNQNNVRNYPFYQTNQGSNPPAKRFTQEPPSSS 436
Query: 154 -QARPQHIQSQETIQPM-YSGGYPSSHKGNASQPAWGPVQKTSWQQETKRVFDPKLGDNV 211
+ + + T PM Y+ YP S P + P+ S ++ + V
Sbjct: 437 LYSLSESSINYSTQSPMYYNYNYP-----QPSFPPFHPIYNDSIGYYSQANPQMYYANQV 491
Query: 212 NLPPP 216
+ PPP
Sbjct: 492 SAPPP 496
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 29.1 bits (62), Expect = 5.6
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 1417 SKSKSNTTVIKVGNKVINIKESTDRREKQGVDDPKPIVSINEVAKTKSNTTKNEVG 1472
SK + + N + + S RR+ VDD P+ ++KT S+T N +G
Sbjct: 578 SKEEDKDVPDPIANAMAELSSSMRRRQSTSVDDEAPV----SLSKTSSSTRLNGLG 629
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 28.7 bits (61), Expect = 7.4
Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 1353 TMIGRTENRK--VINTAVPFKDKIDDRPKVTAKT-RKTETLTRDTKSAEAKHDITALSNS 1409
+++G T+ + ++NT V + DD V ++T + E L K D+ + +S
Sbjct: 311 SLVGTTDTIRPGLLNTEVIDPNANDDERMVISETLEEEENLLALAAKRSKKKDVITVDHS 370
Query: 1410 TVSKLDVSKS---KSNTTVIKVGNKVINIKESTDRREKQGVDDPKPIVS 1455
++ D K + +V ++ S D + +G+D PKP+ S
Sbjct: 371 KINYEDFKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCPKPVTS 419
>SPCC1450.13c |||riboflavin synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 1292 KKMNSKGIDYCTRARDANTLNRICAQKHFTIDNSNVTVT 1330
KK + + ID+ R RD L I + + +D +++T+T
Sbjct: 112 KKQDGEAIDFTFRPRDPFVLKYIVYKGYIALDGTSLTIT 150
>SPBC32F12.06 |pch1||cyclin Pch1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 342
Score = 28.7 bits (61), Expect = 7.4
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 1350 QRRTMIGRTENRKVINTAVPFKDKIDDRPKVTAKTRKTETLTRDTKSAEA 1399
Q + GRT++ +NT P K +DD+ TA K + T EA
Sbjct: 292 QHQNSSGRTDSFHSLNTETPSKSTVDDQILSTAAQPKKSSDTDKEMETEA 341
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 28.7 bits (61), Expect = 7.4
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 1413 KLDVSKSKSNTTVIKVGNKVINIKESTDRREKQGVDDPKPIVSINEVAKTKSNTTKNE 1470
K++V SNT+V++VG + + + QGV P+ NE +T +T+ +
Sbjct: 183 KIEVQLDSSNTSVVRVGTPMHPLPQ-------QGVQSTLPVAPSNEDQRTMESTSPTD 233
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 28.7 bits (61), Expect = 7.4
Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 14/149 (9%)
Query: 712 DITFRGLQSVNRYELFTMDEATKKWLLKIDYSE------LKNLNVLMYTMEELWYERAAI 765
DI RG S+ E W+L + +K N+L +E+ ++ +
Sbjct: 1361 DIVLRGASSLEEIVTHYRSEGIN-WVLVVRQKNTQMEHSVKARNILKNEDDEIRFDEVGM 1419
Query: 766 WLPGHYSKKTRLEPFEKLKLQNKRLKDVNIGKWKLVKQIVNVKGTRLYVDLSPTSARMLA 825
WL G +++ R E LQ+KR+ D + V + V+ + L V L
Sbjct: 1420 WLLGEINERKRNESM----LQSKRILD---SAQQDVAKFVDTSQSNLDVQLISLKDVNDR 1472
Query: 826 RYKMKLSYELQKVDVYLKASAVDKDTFDA 854
+YK K L SA+ + + DA
Sbjct: 1473 KYKWKHKQNAMNKVYDLVQSAIRESSEDA 1501
>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 554
Score = 28.3 bits (60), Expect = 9.8
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 811 RLYVDLSPTSARMLARY-KMKLSYELQKVDVYLKASAVDKDTFDAGLKEKSVTDRNLIMK 869
RLY D+SPT ++ + +L Y ++ D ++ S D D FD+ K+ ++ I+
Sbjct: 8 RLY-DMSPTESKKQEDVSETELVYPVELADATIQPSKSDDDLFDSNDFSKTYLAKSRILS 66
Query: 870 TA 871
A
Sbjct: 67 NA 68
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 28.3 bits (60), Expect = 9.8
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
Query: 1396 SAEAKHDITALSNSTVSKLD-VSKSKSNTTVIKVGNKVINIKESTDRREKQGVDDPKPIV 1454
SA ++ S+S S LD ++ K N V + +KE + + G D ++
Sbjct: 360 SASQPSAASSSSSSEPSNLDKINDVKKNIEVSANEPQPRPVKEDVPKSQVGGETDTTDVI 419
Query: 1455 SINEVAKTKSNTTKNEVGNKAVKINVPTNRTEKTLPQSKQTTKRSNIDEDNL--FAKRPI 1512
+ N K ++ + + + K P N+ E +P +TK S E++ F+ RP
Sbjct: 420 N-NSTPKEETEESPSTELPETGK-EQPPNKAEPAVPTEASSTKPSEAAEESTPRFSVRPN 477
Query: 1513 TMT 1515
T
Sbjct: 478 KFT 480
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.131 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,544,438
Number of Sequences: 5004
Number of extensions: 332916
Number of successful extensions: 880
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 852
Number of HSP's gapped (non-prelim): 52
length of query: 1694
length of database: 2,362,478
effective HSP length: 83
effective length of query: 1611
effective length of database: 1,947,146
effective search space: 3136852206
effective search space used: 3136852206
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
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