Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000100-TA|BGIBMGA000100-PA|undefined
(203 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g17850.1 68416.m02275 protein kinase, putative similar to IRE... 32 0.31
At4g09980.1 68417.m01634 methyltransferase MT-A70 family protein... 30 0.95
At4g01720.1 68417.m00223 WRKY family transcription factor simila... 30 0.95
At4g24390.2 68417.m03498 F-box family protein (FBX14) similar to... 30 1.3
At4g24390.1 68417.m03497 F-box family protein (FBX14) similar to... 30 1.3
At2g37780.1 68415.m04639 DC1 domain-containing protein contains ... 30 1.3
At5g13210.1 68418.m01516 expressed protein 29 1.7
At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gen... 29 1.7
At5g15170.1 68418.m01777 tyrosyl-DNA phosphodiesterase-related s... 29 2.2
At3g13060.2 68416.m01628 expressed protein contains Pfam profile... 29 2.9
At3g13060.1 68416.m01627 expressed protein contains Pfam profile... 29 2.9
At2g32010.1 68415.m03911 endonuclease/exonuclease/phosphatase fa... 29 2.9
At5g23340.1 68418.m02730 expressed protein 28 5.0
At2g39340.1 68415.m04829 SAC3/GANP family protein contains Pfam ... 28 5.0
At2g23350.1 68415.m02788 polyadenylate-binding protein, putative... 28 5.0
At2g20110.2 68415.m02350 tesmin/TSO1-like CXC domain-containing ... 28 5.0
At2g20110.1 68415.m02349 tesmin/TSO1-like CXC domain-containing ... 28 5.0
At3g18810.1 68416.m02389 protein kinase family protein contains ... 27 6.7
At1g36060.1 68414.m04481 AP2 domain-containing transcription fac... 27 6.7
At4g00290.1 68417.m00036 mechanosensitive ion channel domain-con... 27 8.8
At3g22380.1 68416.m02825 expressed protein 27 8.8
At2g18470.1 68415.m02151 protein kinase family protein contains ... 27 8.8
>At3g17850.1 68416.m02275 protein kinase, putative similar to IRE
(incomplete root hair elongation) [Arabidopsis thaliana]
gi|6729346|dbj|BAA89783; contains protein kinase domain
Pfam:PF00069
Length = 1296
Score = 31.9 bits (69), Expect = 0.31
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 78 VCKSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTS-QGPGNY 136
+ S N +T SGP + + NY N P T SN K+G G+ S TS G GN
Sbjct: 121 MASSLGLNRIKTRSGPLPQERVFNYRNDPAT--SNLSKMGADGGDLGSGSATSGSGSGNR 178
Query: 137 DK 138
K
Sbjct: 179 KK 180
>At4g09980.1 68417.m01634 methyltransferase MT-A70 family protein
low similarity to SP|P25583 Karyogamy protein KAR4
{Saccharomyces cerevisiae},
(N6-adenosine)-methyltransferase [Mus musculus]
GI:10179948; contains Pfam profile PF05063: MT-A70
(S-adenosylmethionine-binding subunit of human mRNA:m6A
methyl-transferase (MTase))
Length = 775
Score = 30.3 bits (65), Expect = 0.95
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 104 NYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGPYGSQGHWKESSQYITKT 157
N+PG+N S G PS+K+ + +G G K P S+G + SQ T
Sbjct: 526 NFPGSNISGQMGRGMPSDKTSGGWVPPRGGGPPGKAP--SRGEQNDYSQNFVDT 577
>At4g01720.1 68417.m00223 WRKY family transcription factor similar
to wild oat DNA-binding protein ABF2, GenBank accession
number Z48431
Length = 489
Score = 30.3 bits (65), Expect = 0.95
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 81 SSSSNTKQTDSGPADRYQPTNYHNYPGTNS 110
SSSSN QT S P+ + YHN+P T++
Sbjct: 320 SSSSNLHQTLSSPSATSSSSFYHNFPYTST 349
>At4g24390.2 68417.m03498 F-box family protein (FBX14) similar to
transport inhibitor response 1 protein GI:8777429 from
[Arabidopsis thaliana]
Length = 623
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 56 CRVIKCLNGFR-FGDKYIIKVEQVCKSSSS 84
C+ I CL+GFR F +Y++ + VC + +S
Sbjct: 311 CKSIVCLSGFREFRPEYLLAISSVCANLTS 340
>At4g24390.1 68417.m03497 F-box family protein (FBX14) similar to
transport inhibitor response 1 protein GI:8777429 from
[Arabidopsis thaliana]
Length = 623
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 56 CRVIKCLNGFR-FGDKYIIKVEQVCKSSSS 84
C+ I CL+GFR F +Y++ + VC + +S
Sbjct: 311 CKSIVCLSGFREFRPEYLLAISSVCANLTS 340
>At2g37780.1 68415.m04639 DC1 domain-containing protein contains
Pfam PF03107: DC1 domain
Length = 286
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 97 YQPTNYHNYPGTNSSN--DHKIGYPSN--KSGNQSLTSQGPGNYDKGPYGSQGHWKESSQ 152
YQP N + YP NS + IG+P G N+ GPY QG + Q
Sbjct: 164 YQPQNQNYYPYMNSGSPKTESIGHPETYPPQGGGHQHQHQHQNHQPGPYTPQGDGHQHQQ 223
>At5g13210.1 68418.m01516 expressed protein
Length = 673
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 89 TDSGPADRYQP---TNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGP 133
T SGP+D + +N++N N+ N +GY NKS L+S P
Sbjct: 24 TTSGPSDPFMDAMVSNFNNSARVNNVNSPPMGYTENKSATY-LSSGNP 70
>At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gene
for histone protein GB:X15142 GI:3204 [Physarum
polycephalum]
Length = 614
Score = 29.5 bits (63), Expect = 1.7
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Query: 81 SSSSNTKQTDSGP--ADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQS-LTSQGP-GNY 136
S S + +DSG AD PT+ +Y T + G PS S + S T+ GP G+
Sbjct: 137 SGDSGSPGSDSGSPSADTGSPTDGGSYGDTTGDSGSSAGSPSYPSDDGSGSTAGGPSGST 196
Query: 137 DKGPYGSQGHW-KESSQYITKTDDFRASTNFNVDQAGYQAG 176
G G + +SS + A+T + D AG +G
Sbjct: 197 TDGSAGGESSMGGDSSSAGAAGESGSAATADSGDAAGADSG 237
>At5g15170.1 68418.m01777 tyrosyl-DNA phosphodiesterase-related
similar to Chain A, Crystal Structure Of Human
Tyrosyl-Dna Phosphodiesterase (Tdp1) [Homo sapiens]
GI:20150581
Length = 605
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 144 QGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQNQWGNKVRKKMCYKQCV 196
+G+ K ++ + K D A+ GY G N N+WG+ ++ + ++C+
Sbjct: 312 RGNVKINAAFFKKFDYSDATVRLIASVPGYHTGFNLNKWGH-MKLRTILQECI 363
>At3g13060.2 68416.m01628 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 634
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 128 LTSQGPGNYDKGPYGSQGHWKESSQYITKTD-DFRASTNFNVDQA-GYQAGHNQN 180
L+ Q G Y +G G W E S Y+ D + FN + + YQ G+ N
Sbjct: 75 LSPQAQGFYYRGYENPTGEWDEYSSYVNVEGLDITSPVGFNENASLVYQTGYGYN 129
>At3g13060.1 68416.m01627 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 551
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 128 LTSQGPGNYDKGPYGSQGHWKESSQYITKTD-DFRASTNFNVDQA-GYQAGHNQN 180
L+ Q G Y +G G W E S Y+ D + FN + + YQ G+ N
Sbjct: 75 LSPQAQGFYYRGYENPTGEWDEYSSYVNVEGLDITSPVGFNENASLVYQTGYGYN 129
>At2g32010.1 68415.m03911 endonuclease/exonuclease/phosphatase
family protein similar to inositol polyphosphate
5-phosphatase I (GI:10444261) and II (GI:10444263)
[Arabidopsis thaliana]; contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 594
Score = 28.7 bits (61), Expect = 2.9
Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 11/115 (9%)
Query: 78 VCKSSSSNTKQTDSGPADR--YQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGN 135
VC + + +D P+ R ++P++Y P S PSN S ++ G +
Sbjct: 229 VCDRVFFSHRPSDFDPSFRCGHRPSDYSRRPSDYSRPSDYYSRPSNYSRPSDVSRWGSSD 288
Query: 136 YDKGPYGSQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQNQWGNKVRKKM 190
D GP S S ++ F S ++ GY+ N +Q+ K+M
Sbjct: 289 DDNGPGDS------PSTFLNSPGSFLGSA---ANENGYRTPWNSSQYCLVASKQM 334
>At5g23340.1 68418.m02730 expressed protein
Length = 405
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 48 GLADDEEGCRVIKCLN---GFRFGDKYIIKVEQVCKSSSSNTKQTD 90
GLAD +GCR IK L+ GD + V + C SS K D
Sbjct: 193 GLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACASSLKTLKLLD 238
>At2g39340.1 68415.m04829 SAC3/GANP family protein contains Pfam
profile: PF03399 SAC3/GANP family
Length = 1006
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Query: 89 TDSGPADRYQPTNYHN---YPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNY 136
T S Y P +Y Y TN +N YPS NQ+ S GNY
Sbjct: 165 TPSYSGTYYNPADYQTAGGYQSTNYNNQTAGSYPSTNYSNQTPAS-NQGNY 214
>At2g23350.1 68415.m02788 polyadenylate-binding protein, putative /
PABP, putative
Length = 662
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 47 VGLADDEEGCRVIKCLNGFRFGDK--YIIKVEQVCKSSSSNTKQTDSGPAD 95
V + E+ R ++ LNG +F DK Y+ K ++ + +++ + G +D
Sbjct: 270 VNFENPEDAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSD 320
>At2g20110.2 68415.m02350 tesmin/TSO1-like CXC domain-containing
protein similar to SP|Q9WTJ6 Tesmin
(Metallothionein-like 5, testis-specific) {Mus
musculus}; contains Pfam profile PF03638:
Tesmin/TSO1-like CXC domain
Length = 578
Score = 27.9 bits (59), Expect = 5.0
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 107 GTNSSNDHKIGYPSNKSGNQSLT-SQGPGNYDKGPYGSQGHWKESSQYITKTDDFRASTN 165
GT S+ H++G +N S T S+ GN GP S+ +K I K D +A +
Sbjct: 295 GTKDSSTHRLGQANNGRTTSSQTGSRAGGNASLGP--SKVVYKSLLANIIKPMDVKALCS 352
Query: 166 FNVDQAGYQA 175
V AG A
Sbjct: 353 VLVAVAGEAA 362
>At2g20110.1 68415.m02349 tesmin/TSO1-like CXC domain-containing
protein similar to SP|Q9WTJ6 Tesmin
(Metallothionein-like 5, testis-specific) {Mus
musculus}; contains Pfam profile PF03638:
Tesmin/TSO1-like CXC domain
Length = 571
Score = 27.9 bits (59), Expect = 5.0
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 107 GTNSSNDHKIGYPSNKSGNQSLT-SQGPGNYDKGPYGSQGHWKESSQYITKTDDFRASTN 165
GT S+ H++G +N S T S+ GN GP S+ +K I K D +A +
Sbjct: 295 GTKDSSTHRLGQANNGRTTSSQTGSRAGGNASLGP--SKVVYKSLLANIIKPMDVKALCS 352
Query: 166 FNVDQAGYQA 175
V AG A
Sbjct: 353 VLVAVAGEAA 362
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 27.5 bits (58), Expect = 6.7
Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 2/100 (2%)
Query: 81 SSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGP 140
SSS N +Q+ P+D P+ P +SSN P + + QG N D
Sbjct: 20 SSSDNQQQSSPPPSDSSSPSPPAPPPPDDSSNGSP--QPPSSDSQSPPSPQGNNNNDGNN 77
Query: 141 YGSQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQN 180
+ ++ D+ + N + G+N N
Sbjct: 78 GNNNNDNNNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNNN 117
>At1g36060.1 68414.m04481 AP2 domain-containing transcription
factor, putative similar to AP2 domain transcription
factor GI:4567204 from [Arabidopsis thaliana]
Length = 314
Score = 27.5 bits (58), Expect = 6.7
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 91 SGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQ-GPGNYDKGPYGSQGHWKE 149
S P D + ++Y+N + + YP SG+ + S G Y SQ H++
Sbjct: 42 SAPNDLFSSSSYYNPHASLFPSHSTTSYPDIYSGSMTYPSSFGSDLQQPENYQSQFHYQN 101
Query: 150 SSQYITKTDDFRASTNF 166
+ Y T D+ NF
Sbjct: 102 TITY-THQDNNTCMLNF 117
>At4g00290.1 68417.m00036 mechanosensitive ion channel
domain-containing protein / MS ion channel
domain-containing protein weak similarity to SP|P77338
Potassium efflux system kefA {Escherichia coli};
contains Pfam profile PF00924: Mechanosensitive ion
channel
Length = 497
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 137 DKGPYGSQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQNQWGNKVR 187
D P+ GH + + +K+DDF + V +G G N N W K +
Sbjct: 63 DAKPFNYLGHSSYARAFSSKSDDFGSIVASGVTGSGDGNG-NGNDWVEKAK 112
>At3g22380.1 68416.m02825 expressed protein
Length = 1550
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 83 SSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQ 131
+S T + S P+ QP + + G ++ +G P+ SG++S Q
Sbjct: 1381 ASTTTHSASQPSKNLQPASAASSAGGRNNGPSVLGNPTTSSGSKSQQQQ 1429
>At2g18470.1 68415.m02151 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 633
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Query: 101 NYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGPYGSQG 145
N + Y G N++N+ YP N L SQG G +G G
Sbjct: 190 NQYQYYGNNNNNNASQNYP-----NWHLNSQGQNQQSTGGWGGGG 229
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.131 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,254,834
Number of Sequences: 28952
Number of extensions: 219971
Number of successful extensions: 434
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 429
Number of HSP's gapped (non-prelim): 22
length of query: 203
length of database: 12,070,560
effective HSP length: 78
effective length of query: 125
effective length of database: 9,812,304
effective search space: 1226538000
effective search space used: 1226538000
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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