Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000100-TA|BGIBMGA000100-PA|undefined
(203 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 36 0.023
SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2) 36 0.031
SB_20267| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_3972| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_6746| Best HMM Match : rve (HMM E-Value=2.4) 31 0.50
SB_38675| Best HMM Match : HEAT (HMM E-Value=0.0016) 31 0.66
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 31 0.88
SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_27955| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_50648| Best HMM Match : Atrophin-1 (HMM E-Value=1.3) 30 1.5
SB_19612| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05) 29 3.5
SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_17295| Best HMM Match : Cu2_monooxygen (HMM E-Value=0.00028) 28 4.7
SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2) 28 4.7
SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09) 28 6.2
SB_42576| Best HMM Match : VlpA_repeat (HMM E-Value=8.1) 28 6.2
SB_18916| Best HMM Match : GPS (HMM E-Value=1e-17) 27 8.2
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 35.9 bits (79), Expect = 0.023
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 81 SSSSNTKQTDSGPAD-RYQPTNYHNYPGTNSSNDHKIGYPSN----KSGNQSLTSQGPGN 135
S+S+N+ Q +S D + +N +N NS++D+ SN S N + + G N
Sbjct: 314 SNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNSDNSTSDNSNPDNLTSDNPNTDNSGSDN 373
Query: 136 YDKGPYGSQGHWKESSQYITKTDDFRASTNFNVDQA 171
G + S ++S T D +S N N D +
Sbjct: 374 SSSGNFNSDNSTSDNSNSDNSTSDNSSSDNSNSDNS 409
Score = 31.1 bits (67), Expect = 0.66
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 12/119 (10%)
Query: 81 SSSSNTKQTDSGPADRYQP----TNYHNYPGTNSSNDHKIGYPSNKSGNQSLTS------ 130
S+S+N+ Q D+ +D +P TN N +N+ N + S+ S +LTS
Sbjct: 128 SNSNNSNQ-DNSNSDDSKPDNSNTNNSNSDNSNTDNSNSDNSTSDNSNPDNLTSDNSNTD 186
Query: 131 -QGPGNYDKGPYGSQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQNQWGNKVRK 188
G N G + S ++S D S N D + + N + +K
Sbjct: 187 NSGSDNSSSGNFNSDNSTSDNSTSDNSNSDNSTSDNSTSDNSNSDNSYTDNSTSDNSKK 245
Score = 29.5 bits (63), Expect = 2.0
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 9/91 (9%)
Query: 81 SSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGP 140
+S+SN D+ +D +P N N +NS N + S+ S +LTS P + G
Sbjct: 313 NSNSNNSNQDNSNSDDSKPDN-SNTNNSNSDNSNSDNSTSDNSNPDNLTSDNPNTDNSGS 371
Query: 141 YGSQGHWKESSQYITKTDDFRASTNFNVDQA 171
S S + D S N N D +
Sbjct: 372 DNSS-----SGNF---NSDNSTSDNSNSDNS 394
Score = 27.5 bits (58), Expect = 8.2
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 81 SSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGP 140
+SSS+ +D+ D T+ ++ P NS++D+ SN+ + S S+ P N +
Sbjct: 283 NSSSDNSNSDNSNTDN--STSNNSNP-ENSTSDNSNSNNSNQDNSNSDDSK-PDNSNTNN 338
Query: 141 YGSQGHWKESSQYITKTDDFRASTNFNVDQAG 172
S ++S D S N N D +G
Sbjct: 339 SNSDNSNSDNSTSDNSNPDNLTSDNPNTDNSG 370
>SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2)
Length = 352
Score = 35.5 bits (78), Expect = 0.031
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 99 PTNYH-NYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKG-PYGSQGHWKESSQ 152
P+N + YPG + + +GYPSN +GN ++ GN + G P G E++Q
Sbjct: 251 PSNGNMGYPGNRNGMGNNMGYPSNGNGNGNMGYPSNGNGNMGYPSNGNGMGDEAAQ 306
>SB_20267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 32.3 bits (70), Expect = 0.29
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 101 NYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGP-YGSQGHWKESSQYITKTDD 159
NY N G N +ND+ Y +N + + + GN D Y + ++ + Y ++
Sbjct: 317 NYDNN-GNNGNNDNYNNYDNNDNNDNNDNYDNNGNNDNNDNYDNNDNYDNNDNYNNNDNN 375
Query: 160 FRASTNFNVDQAGYQAGHNQN 180
N N D G G+N N
Sbjct: 376 DNNDNNDNYDNNG-NNGNNDN 395
Score = 31.5 bits (68), Expect = 0.50
Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
Query: 82 SSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGP- 140
+ +N ++G D Y + ++ N +ND+ N + + + GN D
Sbjct: 231 NDNNDNNDNNGNNDNYDNNDNNDNNDNNDNNDNNDNNDKNDNNDNNDNYNNNGNNDNNDN 290
Query: 141 YGSQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQN 180
Y + ++ + Y ++ N N D G G+N N
Sbjct: 291 YDNNDNYDNNDNYNNNDNNDNNDNNDNYDNNG-NNGNNDN 329
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 5/108 (4%)
Query: 81 SSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSN----KSGNQSLTSQGPGNY 136
++ +N + D Y + +N N +ND+ Y +N + N + N
Sbjct: 281 NNGNNDNNDNYDNNDNYDNNDNYNNNDNNDNNDNNDNYDNNGNNGNNDNYNNYDNNDNND 340
Query: 137 DKGPYGSQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQNQWGN 184
+ Y + G+ + Y D++ + N+N + +N N N
Sbjct: 341 NNDNYDNNGNNDNNDNY-DNNDNYDNNDNYNNNDNNDNNDNNDNYDNN 387
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 31.9 bits (69), Expect = 0.38
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Query: 81 SSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGP 140
S SSN + T++G + +N N TN+ ++ G SN GN + GN + G
Sbjct: 377 SGSSNGRNTNNGNNNNAGTSNVGNNGFTNNGVNNNNG-NSNNGGNDKGGNTNGGNNNGGN 435
Query: 141 YGSQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQNQWGN 184
G + + +++ + N + G G N N N
Sbjct: 436 NGGNNNGGNTGGDNNGGNNYGGNNNGGNNNVGNNNGGNNNGGNN 479
Score = 27.5 bits (58), Expect = 8.2
Identities = 26/106 (24%), Positives = 36/106 (33%), Gaps = 11/106 (10%)
Query: 86 TKQTDSGPADRYQPTNYHNYPGTNS----SNDHKIGYPSNKSGNQSLTSQ-------GPG 134
T QT+ QPTN TN H P+++ N+SL + G G
Sbjct: 257 TNQTNQPTNQPNQPTNLPTDQPTNQPANLQTTHAPSQPADQPTNRSLDCRAHRQDTPGHG 316
Query: 135 NYDKGPYGSQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQN 180
Y H+ +S ++ DD N N A N N
Sbjct: 317 LYSNDGNNDDAHFGDSGRHDNFNDDISNDGNLNGGGANNNNNKNNN 362
>SB_3972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 31.9 bits (69), Expect = 0.38
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Query: 82 SSSNTKQTDSGPADRYQPTNY-HNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGP 140
+ SN D+ A Y + +N G+N +ND G S+ G+ + G G+ D
Sbjct: 21 TGSNDNNDDNNGASSYDDNDDDNNGAGSNDNNDDNNGAGSSDGGDYD--NNGAGSNDNDD 78
Query: 141 YGSQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQNQWGN 184
G + + D+ A +N N D G + N + GN
Sbjct: 79 NNGTGSYDDDGD----DDNNGAGSNDNDDNNGDGSNDNDDNNGN 118
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 81 SSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGP 140
++ + + D D + +N G ND+ G SN +GN + S GN D
Sbjct: 93 NNGAGSNDNDDNNGDGSNDNDDNNGNGNYDDNDNNNGACSNDNGNDNNGSYHYGNDDNNG 152
Query: 141 YGS 143
GS
Sbjct: 153 AGS 155
>SB_6746| Best HMM Match : rve (HMM E-Value=2.4)
Length = 488
Score = 31.5 bits (68), Expect = 0.50
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 70 KYIIKVEQVCKSSSSNTK-QTDSGPADRYQPTNYHNYPGTNSSNDHKIGY-PSNKSGNQS 127
+YI +++ +S ++ K QT P + Q N TN +N H+ G P+N++ +Q
Sbjct: 329 EYIPSLQERRQSPTNQAKNQTGKNPTN--QAKNQTGQNSTNQAN-HQTGQNPTNQANHQ- 384
Query: 128 LTSQGPGNYDKGPYG-SQGHWKESSQYITKTDDFRASTNFN-VDQAGYQAGHN 178
T Q P N K G + + E+ +T+ + T N +QA Q G N
Sbjct: 385 -TGQNPTNQAKNQTGQNPTNQAENQTGQNRTNQAKNQTGQNPTNQAKNQIGQN 436
>SB_38675| Best HMM Match : HEAT (HMM E-Value=0.0016)
Length = 606
Score = 31.1 bits (67), Expect = 0.66
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 82 SSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGN 135
S S+T+ G + YQ + N G + N H G N GN + QG GN
Sbjct: 299 SQSSTRDYQVGITESYQGNSSGNLQGNGNGNPHGNG-NDNLQGNGNGNQQGNGN 351
>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
Length = 3342
Score = 30.7 bits (66), Expect = 0.88
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 70 KYIIKVEQVCKSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLT 129
KY+ +V+Q +S+ + K D+ + Y PTN + G ++S + N N+ +
Sbjct: 1374 KYVPQVQQAQTTSAISEKSGDALIKETYAPTN-RIWHGKSASEINLSQSGHNTRQNKYIP 1432
Query: 130 SQGPGNYDKGPYGS 143
SQ GN G G+
Sbjct: 1433 SQNMGNQKHGIPGT 1446
>SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 100 TNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGPYGSQGH---WKESSQYITK 156
TN + P S+N + G QS T+ G Y G YG+QG ++++
Sbjct: 374 TNMQSQPFNQSNNQFGSVQNTGSFGGQSTTAYGQSGY--GNYGNQGSTYGTQQTTGNFAV 431
Query: 157 TDDFRASTNFNVDQAGYQAGHNQNQWGN 184
+ ST FN Q+G Q +GN
Sbjct: 432 QAQQQTSTPFN--QSGQQTQQAATGYGN 457
>SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 5/82 (6%)
Query: 101 NYHNYP--GTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGPYGSQGHWKESSQYITKTD 158
N NY G N +ND+ Y +N GN N + Y + ++ + Y +
Sbjct: 90 NNDNYDNNGNNDNNDNYNNYDNN--GNNDSNDNNGNNDNNDNYDNNDNYDNNDNYNNNDN 147
Query: 159 DFRASTNFNVDQAGYQAGHNQN 180
+ N N D G G+N N
Sbjct: 148 NDNNDNNDNYDNNG-NNGNNDN 168
>SB_27955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 29.9 bits (64), Expect = 1.5
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Query: 78 VCKSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSL--TSQGPGN 135
V SS S T+QT + +PT +H P TN +++ K G S +L T+ PGN
Sbjct: 445 VTPSSGSTTRQTPNS----IEPTRFHFTPITNGTHEQK-GQRGEVSPPTTLRPTATHPGN 499
Query: 136 --YDKGPYGSQ 144
++ P GSQ
Sbjct: 500 QVHEWQPGGSQ 510
>SB_50648| Best HMM Match : Atrophin-1 (HMM E-Value=1.3)
Length = 1281
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 53 EEGCRVIKCLNGFRFGDKYIIKVEQVCKSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSN 112
E+G + C ++F D Y + C SS + +K +D + ++ + P +S+
Sbjct: 565 EQGEAPVNCCQDYQFEDNYAAAPYKPCASSPTQSKASDDPSLPNKRASDDLSLPNKRASD 624
Query: 113 D 113
D
Sbjct: 625 D 625
>SB_19612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 112 NDHKIGYPSNKSGN-QSLTSQGPGNYDKGPYGSQGHW--KESSQYITKTDDFRAST 164
N KI PS K+ + Q GPG Y K P GS W +SS + +D R T
Sbjct: 480 NTSKIIEPSTKTKSPQPKGPWGPGGYAKRPAGSGDSWSRSDSSSNSSGSDPARVRT 535
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/112 (16%), Positives = 44/112 (39%), Gaps = 1/112 (0%)
Query: 73 IKVEQVCKSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQG 132
+ V +S+SN+ + ++ +N ++ +NS+++ SN + N + S
Sbjct: 411 VTVTATVHNSNSNSNSNSNSNSNSNSNSNSNSKSNSNSNSNSNSNSNSNSNSNSNSNSNS 470
Query: 133 PGNYDKGPYGSQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQNQWGN 184
N + S S+ + +++N N + + +N N N
Sbjct: 471 NSNSNSSSSSSSNSNSNSNSNSNSNSNSNSNSNSN-SNSNSDSNNNSNSNSN 521
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 81 SSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGN 135
SSSSN+ + ++ +N ++ +NS++D SN + N + S N
Sbjct: 479 SSSSNSNSNSNSNSNSNSNSNSNSNSNSNSNSDSNNNSNSNSNSNSNSNSNSNSN 533
>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1850
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 74 KVEQVCKSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGP 133
K+ C SS KQ A P YP +++ ++ GYP+ + G Q+ S P
Sbjct: 1238 KMCNYCTDKSSTAKQDIPQSAAAPAPAPASAYPSQDAA--YQTGYPAYQQGGQAYPSAAP 1295
>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
Length = 2293
Score = 28.7 bits (61), Expect = 3.5
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 73 IKVEQVCKSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQG 132
+ +++V KS ++ GP + TN HN + ++DH +N GNQS
Sbjct: 764 VGIKKVTKSHNNKESSDKYGPGA--EQTNKHNQDTVDETSDHDNN--ANHKGNQS----- 814
Query: 133 PGNYDKGPYGSQ 144
PG +G SQ
Sbjct: 815 PGENKQGATTSQ 826
>SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/87 (20%), Positives = 33/87 (37%)
Query: 81 SSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGP 140
SS+SN+ + S + + + +NS+++ SN S N + S N
Sbjct: 130 SSNSNSNSSSSSSSSSSSSSGSSSSSNSNSNSNSNSSSSSNSSSNSNSNSSSSSNSSSNS 189
Query: 141 YGSQGHWKESSQYITKTDDFRASTNFN 167
S S+ + +S+N N
Sbjct: 190 NSSSNSSSSSNSSSNSSRSSSSSSNSN 216
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 82 SSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGPY 141
SSS++ + ++ +N + +NSS+ SN S N S +S N +
Sbjct: 151 SSSSSNSNSNSNSNSSSSSNSSSNSNSNSSSSSNSSSNSNSSSNSSSSSNSSSNSSRSSS 210
Query: 142 GSQGHWKESS 151
S SS
Sbjct: 211 SSSNSNSNSS 220
>SB_17295| Best HMM Match : Cu2_monooxygen (HMM E-Value=0.00028)
Length = 616
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 76 EQVCKSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSND-HKIGYPSNKSGNQSLTSQGPG 134
+Q+ + + + TDSG Q NYH+Y N H + + N+ P
Sbjct: 275 QQMHEDITRKRQATDSGVFKPNQARNYHSYHDFNKPEQMHSHAFDTCTGPNKQRIGSLPD 334
Query: 135 NYDKGP 140
N+ P
Sbjct: 335 NFSNSP 340
>SB_12271| Best HMM Match : DUF1079 (HMM E-Value=1.2)
Length = 1716
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/97 (17%), Positives = 36/97 (37%)
Query: 101 NYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGPYGSQGHWKESSQYITKTDDF 160
++ N P ++D++ Y N S + PGN+ P GH + T +
Sbjct: 362 DHGNQPRYTGNHDNQPRYTGNHDDQHSNQCRRPGNHGNLPSNQIGHTGNHGDHYTNRKSY 421
Query: 161 RASTNFNVDQAGYQAGHNQNQWGNKVRKKMCYKQCVT 197
+ D+ ++ ++ K+ K+ +T
Sbjct: 422 PGNQGDGNDRTKTKSSTQEDLLSRSYDKRKLTKEQLT 458
>SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09)
Length = 1472
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/54 (33%), Positives = 23/54 (42%)
Query: 86 TKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKG 139
T QT SGP P+ N SSN PS+ S +S + PG+ G
Sbjct: 1078 TPQTGSGPLSMPHPSQAMNVNTQWSSNRGAYSAPSSPSQPRSQSQPEPGSESVG 1131
>SB_42576| Best HMM Match : VlpA_repeat (HMM E-Value=8.1)
Length = 325
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/58 (32%), Positives = 25/58 (43%)
Query: 77 QVCKSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPG 134
Q C S +S T + R++ T YPGT + IG P S TS+ PG
Sbjct: 36 QPCTSKTSKYPGTMNLVHQRHRNTRTSEYPGTINLVMKDIGIPGYYQPCTSKTSKYPG 93
>SB_18916| Best HMM Match : GPS (HMM E-Value=1e-17)
Length = 1470
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 85 NTKQ--TDSGPADRY-QPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGP 133
NT Q T+S +D QP+ Y N+PG S+ + G P ++ T+ GP
Sbjct: 502 NTNQYVTNSWKSDNLAQPSVYQNWPGIQRSSSYG-GVPGYQNARYVNTNGGP 552
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.131 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,644,064
Number of Sequences: 59808
Number of extensions: 317520
Number of successful extensions: 705
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 612
Number of HSP's gapped (non-prelim): 94
length of query: 203
length of database: 16,821,457
effective HSP length: 79
effective length of query: 124
effective length of database: 12,096,625
effective search space: 1499981500
effective search space used: 1499981500
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 58 (27.5 bits)
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