GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000100-TA|BGIBMGA000100-PA|undefined
         (203 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   1.2  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   2.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   4.9  
AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding pr...    23   6.4  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   6.4  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 11/43 (25%), Positives = 24/43 (55%)

Query: 40  NACKTIRVGLADDEEGCRVIKCLNGFRFGDKYIIKVEQVCKSS 82
           N    ++  L  + + CR+   ++G   G++  + VE+VCK++
Sbjct: 383 NPINNMKSALTGELKICRLSTTVSGVDGGEEVFMFVEKVCKNN 425


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 14/62 (22%), Positives = 27/62 (43%)

Query: 80  KSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKG 139
           ++  S+ +Q    P+ + QP++  N   TN  ++  +G  S   G+   +  G    D  
Sbjct: 278 RAPPSSQQQPQQQPSQQPQPSSQSNAQLTNGGSNGLLGSSSQAGGSGGSSGGGLLGTDGS 337

Query: 140 PY 141
            Y
Sbjct: 338 QY 339


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 117 GYPSNKSGNQSLTSQGPGNYDKGPYGSQGH 146
           G P  K G +   ++ P NY+KG  G  G+
Sbjct: 205 GIPGTK-GEKGEPARHPENYNKGQKGEPGN 233


>AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding
           protein OBPjj83a protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 9/14 (64%), Positives = 10/14 (71%)

Query: 42  CKTIRVGLADDEEG 55
           C  IR GL DDE+G
Sbjct: 205 CVGIRTGLYDDEQG 218


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query: 94  ADRYQPTNYHNYPGTNS 110
           ADRY   +YH + G N+
Sbjct: 506 ADRYDANDYHLHAGRNA 522


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.131    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,580
Number of Sequences: 2123
Number of extensions: 9818
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 5
length of query: 203
length of database: 516,269
effective HSP length: 61
effective length of query: 142
effective length of database: 386,766
effective search space: 54920772
effective search space used: 54920772
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 46 (22.6 bits)