Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000100-TA|BGIBMGA000100-PA|undefined
(203 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16685-3|AAA28169.3| 321|Caenorhabditis elegans Hypothetical pr... 34 0.082
Z81555-1|CAB04516.1| 242|Caenorhabditis elegans Hypothetical pr... 32 0.25
AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical ... 32 0.25
U55857-1|AAA98026.1| 394|Caenorhabditis elegans Hypothetical pr... 32 0.33
AL132862-12|CAB60542.1| 380|Caenorhabditis elegans Hypothetical... 31 0.76
Z81094-3|CAB03153.1| 995|Caenorhabditis elegans Hypothetical pr... 30 1.0
U55857-2|AAA98027.2| 397|Caenorhabditis elegans Hypothetical pr... 30 1.0
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 30 1.0
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 29 1.8
U80454-4|AAB37876.3| 896|Caenorhabditis elegans Prion-like-(q/n... 29 1.8
AL132948-9|CAC51068.1| 230|Caenorhabditis elegans Hypothetical ... 29 1.8
Z78542-3|CAB01745.2| 463|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z79756-5|CAB02116.2| 478|Caenorhabditis elegans Hypothetical pr... 29 3.1
U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein. 29 3.1
U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryo... 29 3.1
U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryo... 29 3.1
U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryo... 29 3.1
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 5.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 5.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 5.4
Z92833-5|CAK12560.1| 411|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z92833-4|CAK12559.1| 442|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z69885-2|CAC35825.1| 469|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z69885-1|CAC35824.1| 467|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical p... 27 7.1
Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical p... 27 7.1
U51163-1|AAA96319.1| 506|Caenorhabditis elegans CE-FKH-1 protein. 27 7.1
Z70781-7|CAJ55254.1| 380|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z70781-6|CAA94831.2| 349|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 27 9.4
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 27 9.4
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 27 9.4
U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily as... 27 9.4
U22832-2|AAA64509.2| 571|Caenorhabditis elegans Hypothetical pr... 27 9.4
AL031630-3|CAA20983.1| 140|Caenorhabditis elegans Hypothetical ... 27 9.4
AF003151-2|AAK18919.3| 277|Caenorhabditis elegans Prion-like-(q... 27 9.4
>L16685-3|AAA28169.3| 321|Caenorhabditis elegans Hypothetical
protein ZC21.3 protein.
Length = 321
Score = 33.9 bits (74), Expect = 0.082
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Query: 82 SSSNTKQTDSGPADRYQPTNYH-----NYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNY 136
SSS+ + ++ P+ Y PT+ + NY +++S+ + PS GN ++Q Y
Sbjct: 74 SSSSPQYSNGAPSTTYSPTSTYGYSSQNYNPSSASSSNVYRNPSTSYGNTQQSNQNYVAY 133
Query: 137 DKGPYGSQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQNQ 181
D S ++ Q + T + + N AG+ NQNQ
Sbjct: 134 DTTNQNSPYYY----QRVPSTAQYNSVLGVN---AGFPQSSNQNQ 171
Score = 31.9 bits (69), Expect = 0.33
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 117 GYPSNKSG-NQSLTSQGPGNYDKGPYGSQGHWKESSQYITKTDDFRASTNFNVDQAGYQA 175
GY +N G + T+QG GN ++G Y +Q + ++ T+T F +++ Q Q
Sbjct: 181 GYMNNNQGMYNTQTTQGYGN-NQGSYQNQMMYNNNNPQNTQTTTFLYASSIQPQQQQQQQ 239
Query: 176 GHNQNQWGNK 185
+N NQ+ N+
Sbjct: 240 QYN-NQYNNQ 248
>Z81555-1|CAB04516.1| 242|Caenorhabditis elegans Hypothetical
protein F58E10.5 protein.
Length = 242
Score = 32.3 bits (70), Expect = 0.25
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 95 DRYQPTNYHNYPGTN-SSNDHKIGYPSNKSGNQSLTSQGPGNYDKGPYGSQGHWKESSQY 153
D Q NYH+YP + ++N + GY ++ N G G Y++ Y ++ Q
Sbjct: 43 DVLQNMNYHHYPAQDMTTNSYNGGYDNSMQQNFMQPDNGAGYYNEN-YQQMPDFQFPVQN 101
Query: 154 ITKTDDFRASTNFNVDQAGYQAGHNQNQWGNK 185
T+ F +T N Q + ++ N N+
Sbjct: 102 FDFTNQFEFTTPINDLQQSQTSINHTNPDNNE 133
>AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical
protein R09A1.1 protein.
Length = 1121
Score = 32.3 bits (70), Expect = 0.25
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 95 DRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGPYGSQGHWKESSQYI 154
DRY + NY SS+ + GY ++ N+ +G N D+G Y H + S
Sbjct: 20 DRYHNNDRQNY---RSSDQGRSGYNDDRRDNRYDDRRGSNN-DRGCYDQ--HDRRGSS-- 71
Query: 155 TKTDDFRASTNFNVDQAGYQAGHNQN-QWGNKVR 187
DD R +N GYQ ++Q+ ++G+ R
Sbjct: 72 --NDDRRGYRGYNQGGGGYQQQYSQDARYGSNQR 103
>U55857-1|AAA98026.1| 394|Caenorhabditis elegans Hypothetical
protein K08D10.10 protein.
Length = 394
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 92 GPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNY 136
GP D +Q + Y +++SND GYP + S ++ T + G+Y
Sbjct: 310 GPIDTFQSFHLSWYNASSTSNDGFYGYPGSPSYEKNGTIRTDGSY 354
>AL132862-12|CAB60542.1| 380|Caenorhabditis elegans Hypothetical
protein Y73F8A.17 protein.
Length = 380
Score = 30.7 bits (66), Expect = 0.76
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 72 IIKVEQVCKSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPS 120
++ + QV S + + T+SG ++ H +P T+ N + YP+
Sbjct: 219 VLDILQVASQSENYNESTNSGRLQNEISSSIHQFPSTSYQNQYPHAYPT 267
>Z81094-3|CAB03153.1| 995|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 995
Score = 30.3 bits (65), Expect = 1.0
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Query: 97 YQPTNYHNYPGTNSSNDHKIG---YPSNKSGNQSLTSQGPGNYDKGPYGSQGHWKESSQY 153
Y P ++HNY +S H+ G Y + K NQ G +D Y Q S
Sbjct: 195 YSPRDHHNYNSQSSPRSHQGGQDRYSAPKEDNQRRYDNHQGGHDS--YRGQNSGGYSG-- 250
Query: 154 ITKTDDFRASTNFNVDQAGYQAGHNQNQWGNK 185
+ ++R D +++G N + G K
Sbjct: 251 -NNSGEYRNDYRSQQDSRDHRSGGNNSSSGFK 281
>U55857-2|AAA98027.2| 397|Caenorhabditis elegans Hypothetical
protein K08D10.9 protein.
Length = 397
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 92 GPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQ-GPGNYDKGPY 141
GP D +Q Y ++S+N GYP + S ++ T + G GN D Y
Sbjct: 313 GPIDTFQSFYLSWYNASSSTNGGFYGYPGSPSNEKNSTIRAGYGNLDAAIY 363
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 77 QVCKSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGN---QSLTSQGP 133
QV S + + T+SG ++ H +P T+ N + YP+ + Q T+
Sbjct: 224 QVASQSENYNESTNSGRLQNEISSSIHQFPSTSYQNQYPHAYPTVNTPPIYVQQFTALFD 283
Query: 134 GNYDK-GPYGSQGHWKESSQYITKTDDFRASTNFNVDQ 170
+++ P Q ++ QY++ F + N+ Q
Sbjct: 284 EIHNQFDPKTKQNRVAKNVQYLSSVPQFAINQKENIHQ 321
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 101 NYHNYPGTNSSNDHKIGYPSNKSGNQ------SLTSQGPGNYDKGPYGSQGHWKES 150
NY N GTN ++ + N +GN S + GN YG++G WK S
Sbjct: 248 NYGNSWGTNDNDGNSWKGSGNSNGNSDNWGGSSGSGSNGGNDGDSNYGNEGSWKPS 303
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 101 NYHNYPGTNSSNDHKIGYPSNKSGNQ------SLTSQGPGNYDKGPYGSQGHWKES 150
NY N GTN ++ + N +GN S + GN YG++G WK S
Sbjct: 248 NYGNSWGTNDNDGNSWKGSGNSNGNSDNWGGSSGSGSNGGNDGDSNYGNEGSWKPS 303
>U80454-4|AAB37876.3| 896|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 66
protein.
Length = 896
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/100 (21%), Positives = 37/100 (37%), Gaps = 1/100 (1%)
Query: 82 SSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGPY 141
++SN + + +G D+ P ++ G N ND + N Q + G D
Sbjct: 620 NASNVQNSQNGQNDKNDPNAQNSQNGQNRQNDPNVQNSQNAQNGQYAQNSKNGQNDPNAK 679
Query: 142 GSQ-GHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQN 180
+Q G ++ + D + N DQ + QN
Sbjct: 680 NAQNGQNDPNAPNAQNSKDDANAQNAQNDQNAPNDANGQN 719
>AL132948-9|CAC51068.1| 230|Caenorhabditis elegans Hypothetical
protein Y39B6A.9 protein.
Length = 230
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 129 TSQGP-GNYDKGPYGSQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHN 178
+ GP G+Y KG YGS G+ E + +K F G AGH+
Sbjct: 118 SGSGPYGSYQKGYYGSDGY--EHDDHKSKYSSHNEDNGFKKGYDGAGAGHD 166
>Z78542-3|CAB01745.2| 463|Caenorhabditis elegans Hypothetical
protein F20D1.3 protein.
Length = 463
Score = 29.1 bits (62), Expect = 2.3
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 11/87 (12%)
Query: 111 SNDHKIGYPSNKSGNQSLTSQGPG----NYDKGPYGSQGHWKESSQYITKTDDFRASTNF 166
SN YPSN GNQ Q P N ++ YG+ G+ + SQ D + +
Sbjct: 379 SNPSNQPYPSNNYGNQGGQGQAPPYPSYNPNQSNYGNAGNQQGPSQ-----DQYGNAGYD 433
Query: 167 NVDQAGY-QAGHNQN-QWGNKVRKKMC 191
Q GY Q QN + + +KK C
Sbjct: 434 ANQQGGYTQTSDGQNAYYPTQKKKKSC 460
>Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical
protein B0379.3b protein.
Length = 1050
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 82 SSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGP- 140
S+S + + P +R T+ GT+S + P+ G +L+ N ++GP
Sbjct: 443 STSRPPRAPTSPVNRVMETDPLMGQGTSSGAPQRSAIPNPFGGAPALSRSTITNGNRGPS 502
Query: 141 YGSQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQNQWGNKVRKK 189
YG +G + T + + +++ D+ Q + + +K++KK
Sbjct: 503 YGDRGERVQDVGDTTSDSEITSEGSYS-DEDPEQKEIKRQRRKDKLKKK 550
>Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical
protein B0379.3a protein.
Length = 1054
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 82 SSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGP- 140
S+S + + P +R T+ GT+S + P+ G +L+ N ++GP
Sbjct: 447 STSRPPRAPTSPVNRVMETDPLMGQGTSSGAPQRSAIPNPFGGAPALSRSTITNGNRGPS 506
Query: 141 YGSQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQNQWGNKVRKK 189
YG +G + T + + +++ D+ Q + + +K++KK
Sbjct: 507 YGDRGERVQDVGDTTSDSEITSEGSYS-DEDPEQKEIKRQRRKDKLKKK 554
>Z79756-5|CAB02116.2| 478|Caenorhabditis elegans Hypothetical
protein F53C11.7 protein.
Length = 478
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 80 KSSSSNTKQTDSGPADRYQPTNYHNY--PGTNSSNDHKIGYPSNKSGNQS 127
+S ++ + T S + NY +Y P +SSN +G+P+ +G S
Sbjct: 4 QSQAAPSSSTSSSHLMHHHSNNYPSYTNPSASSSNHSNMGHPNASTGQTS 53
>U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein.
Length = 1379
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/70 (25%), Positives = 27/70 (38%)
Query: 67 FGDKYIIKVEQVCKSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQ 126
+G+ Y + + ++S DS DRY YH G D I + SGN
Sbjct: 1089 YGEPYGLIPQYPHNTTSGYESYADSELYDRYAAHRYHPRGGPIIDEDEYIYRQQSTSGNS 1148
Query: 127 SLTSQGPGNY 136
+ + NY
Sbjct: 1149 PINTSSYVNY 1158
>U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform c protein.
Length = 1340
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/70 (25%), Positives = 27/70 (38%)
Query: 67 FGDKYIIKVEQVCKSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQ 126
+G+ Y + + ++S DS DRY YH G D I + SGN
Sbjct: 1050 YGEPYGLIPQYPHNTTSGYESYADSELYDRYAAHRYHPRGGPIIDEDEYIYRQQSTSGNS 1109
Query: 127 SLTSQGPGNY 136
+ + NY
Sbjct: 1110 PINTSSYVNY 1119
>U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform a protein.
Length = 1376
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/70 (25%), Positives = 27/70 (38%)
Query: 67 FGDKYIIKVEQVCKSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQ 126
+G+ Y + + ++S DS DRY YH G D I + SGN
Sbjct: 1086 YGEPYGLIPQYPHNTTSGYESYADSELYDRYAAHRYHPRGGPIIDEDEYIYRQQSTSGNS 1145
Query: 127 SLTSQGPGNY 136
+ + NY
Sbjct: 1146 PINTSSYVNY 1155
>U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform b protein.
Length = 1379
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/70 (25%), Positives = 27/70 (38%)
Query: 67 FGDKYIIKVEQVCKSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQ 126
+G+ Y + + ++S DS DRY YH G D I + SGN
Sbjct: 1089 YGEPYGLIPQYPHNTTSGYESYADSELYDRYAAHRYHPRGGPIIDEDEYIYRQQSTSGNS 1148
Query: 127 SLTSQGPGNY 136
+ + NY
Sbjct: 1149 PINTSSYVNY 1158
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 81 SSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQG 132
+SS TK T SGP P+ + +S PS SG+ T+ G
Sbjct: 491 TSSGTTKSTTSGPTTSSGPSTVSERTLSTTSGPSTTSGPSTTSGSTVSTTPG 542
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 101 NYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGPYGSQ 144
N + G N N G GNQ +T+ G G +G +G Q
Sbjct: 176 NQGGFGGQNGQNGQNTGNNGGFGGNQGVTASGFGGQQQG-FGQQ 218
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 101 NYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGPYGSQ 144
N + G N N G GNQ +T+ G G +G +G Q
Sbjct: 197 NQGGFGGQNGQNGQNTGNNGGFGGNQGVTASGFGGQQQG-FGQQ 239
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 101 NYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGPYGSQ 144
N + G N N G GNQ +T+ G G +G +G Q
Sbjct: 182 NQGGFGGQNGQNGQNTGNNGGFGGNQGVTASGFGGQQQG-FGQQ 224
>Z92833-5|CAK12560.1| 411|Caenorhabditis elegans Hypothetical
protein F38A6.1c protein.
Length = 411
Score = 27.5 bits (58), Expect = 7.1
Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 17/121 (14%)
Query: 80 KSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKG 139
+S+ ++ + PADR +Y G + ++ ++ + + G K
Sbjct: 90 RSNGRSSSTVAASPADR-------SYSGVSGGQGQELTIQEFETVTEKIRRHGTYGQSKP 142
Query: 140 PYG-----SQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQNQWGNKVRKKMCYKQ 194
PY + K +S+ +T ++ + N+ +D Y +NQ +W N +R + +
Sbjct: 143 PYSYISLITMAIQKSNSRQLTLSEIY----NWIMDLFPYYQ-NNQQRWQNSIRHSLSFND 197
Query: 195 C 195
C
Sbjct: 198 C 198
>Z92833-4|CAK12559.1| 442|Caenorhabditis elegans Hypothetical
protein F38A6.1b protein.
Length = 442
Score = 27.5 bits (58), Expect = 7.1
Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 17/121 (14%)
Query: 80 KSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKG 139
+S+ ++ + PADR +Y G + ++ ++ + + G K
Sbjct: 121 RSNGRSSSTVAASPADR-------SYSGVSGGQGQELTIQEFETVTEKIRRHGTYGQSKP 173
Query: 140 PYG-----SQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQNQWGNKVRKKMCYKQ 194
PY + K +S+ +T ++ + N+ +D Y +NQ +W N +R + +
Sbjct: 174 PYSYISLITMAIQKSNSRQLTLSEIY----NWIMDLFPYYQ-NNQQRWQNSIRHSLSFND 228
Query: 195 C 195
C
Sbjct: 229 C 229
>Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical
protein F38A6.1a protein.
Length = 506
Score = 27.5 bits (58), Expect = 7.1
Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 17/121 (14%)
Query: 80 KSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKG 139
+S+ ++ + PADR +Y G + ++ ++ + + G K
Sbjct: 185 RSNGRSSSTVAASPADR-------SYSGVSGGQGQELTIQEFETVTEKIRRHGTYGQSKP 237
Query: 140 PYG-----SQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQNQWGNKVRKKMCYKQ 194
PY + K +S+ +T ++ + N+ +D Y +NQ +W N +R + +
Sbjct: 238 PYSYISLITMAIQKSNSRQLTLSEIY----NWIMDLFPYYQ-NNQQRWQNSIRHSLSFND 292
Query: 195 C 195
C
Sbjct: 293 C 293
>Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical protein
T11G6.5 protein.
Length = 1406
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 91 SGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGPYGSQGH 146
SGP+ ++P +N + + G+ G + ++G NY+ G +G G+
Sbjct: 1168 SGPSQSFRPNQQYNPNFNHQRPPFQFGFNPRGRGRGNFNNRGGHNYNMG-HGRNGN 1222
>Z69885-2|CAC35825.1| 469|Caenorhabditis elegans Hypothetical
protein T04C10.2b protein.
Length = 469
Score = 27.5 bits (58), Expect = 7.1
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Query: 81 SSSSNTKQTDSGPADRYQPTNY--HNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDK 138
S S+N +S R P N+ N N N G PS GN LT P N
Sbjct: 367 SLSANINTNNSTNGTRKTPENFLGENSNLVNLDNLLGSGTPSTTGGNPFLTGAAPAN--A 424
Query: 139 GPYGSQ 144
P+ +Q
Sbjct: 425 NPFAAQ 430
>Z69885-1|CAC35824.1| 467|Caenorhabditis elegans Hypothetical
protein T04C10.2a protein.
Length = 467
Score = 27.5 bits (58), Expect = 7.1
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Query: 81 SSSSNTKQTDSGPADRYQPTNY--HNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDK 138
S S+N +S R P N+ N N N G PS GN LT P N
Sbjct: 365 SLSANINTNNSTNGTRKTPENFLGENSNLVNLDNLLGSGTPSTTGGNPFLTGAAPAN--A 422
Query: 139 GPYGSQ 144
P+ +Q
Sbjct: 423 NPFAAQ 428
>Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical
protein F39D8.1c protein.
Length = 924
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 119 PSNKSGNQS-LTSQGPGNYDKGPYGSQGHWKESSQYITKTDDFRASTN----FNVDQAGY 173
PS + NQ + S PG Y +G ++G E + ++ F S N FN DQ GY
Sbjct: 475 PSTQYTNQQGMYSSTPG-YQQGELLTEGSGTEENVFLGGQQQFTTSPNGQQGFNDDQQGY 533
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/57 (28%), Positives = 22/57 (38%)
Query: 98 QPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGPYGSQGHWKESSQYI 154
Q N Y G S N ++ YP G +Q N + G Y Q ++ Q I
Sbjct: 230 QNINTGGYIGDQSQNQNQGQYPDPNQGQYQNQNQQNQNINAGGYVDQNQFQGQDQNI 286
>Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical
protein F39D8.1b protein.
Length = 919
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 119 PSNKSGNQS-LTSQGPGNYDKGPYGSQGHWKESSQYITKTDDFRASTN----FNVDQAGY 173
PS + NQ + S PG Y +G ++G E + ++ F S N FN DQ GY
Sbjct: 470 PSTQYTNQQGMYSSTPG-YQQGELLTEGSGTEENVFLGGQQQFTTSPNGQQGFNDDQQGY 528
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/57 (28%), Positives = 22/57 (38%)
Query: 98 QPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGPYGSQGHWKESSQYI 154
Q N Y G S N ++ YP G +Q N + G Y Q ++ Q I
Sbjct: 225 QNINTGGYIGDQSQNQNQGQYPDPNQGQYQNQNQQNQNINAGGYVDQNQFQGQDQNI 281
>Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical
protein F39D8.1a protein.
Length = 945
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 119 PSNKSGNQS-LTSQGPGNYDKGPYGSQGHWKESSQYITKTDDFRASTN----FNVDQAGY 173
PS + NQ + S PG Y +G ++G E + ++ F S N FN DQ GY
Sbjct: 493 PSTQYTNQQGMYSSTPG-YQQGELLTEGSGTEENVFLGGQQQFTTSPNGQQGFNDDQQGY 551
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/57 (28%), Positives = 22/57 (38%)
Query: 98 QPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGPYGSQGHWKESSQYI 154
Q N Y G S N ++ YP G +Q N + G Y Q ++ Q I
Sbjct: 248 QNINTGGYIGDQSQNQNQGQYPDPNQGQYQNQNQQNQNINAGGYVDQNQFQGQDQNI 304
>Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 91 SGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKGPYGSQGH 146
SGP+ ++P +N + + G+ G + ++G NY+ G +G G+
Sbjct: 1168 SGPSQSFRPNQQYNPNFNHQRPPFQFGFNPRGRGRGNFNNRGGHNYNMG-HGRNGN 1222
>Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical
protein T09A5.12 protein.
Length = 708
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/67 (22%), Positives = 29/67 (43%)
Query: 64 GFRFGDKYIIKVEQVCKSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKS 123
G +G+ Y + V+ +SSN ++ + PTNY + P + ++
Sbjct: 10 GDSYGNDYHLPVQGPSTIASSNGLRSQQSKIIKRPPTNYKSIPACRLAPRRRLFVADGNG 69
Query: 124 GNQSLTS 130
+S+TS
Sbjct: 70 VQKSMTS 76
>U51163-1|AAA96319.1| 506|Caenorhabditis elegans CE-FKH-1 protein.
Length = 506
Score = 27.5 bits (58), Expect = 7.1
Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 17/121 (14%)
Query: 80 KSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYDKG 139
+S+ ++ + PADR +Y G + ++ ++ + + G K
Sbjct: 185 RSNGRSSSTVAASPADR-------SYSGVSGGQGQELTIQEFETVTEKIRRHGTYGQSKP 237
Query: 140 PYG-----SQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQNQWGNKVRKKMCYKQ 194
PY + K +S+ +T ++ + N+ +D Y +NQ +W N +R + +
Sbjct: 238 PYSYISLITMAIQKSNSRQLTLSEIY----NWIMDLFPYYQ-NNQQRWQNSIRHSLSFND 292
Query: 195 C 195
C
Sbjct: 293 C 293
>Z70781-7|CAJ55254.1| 380|Caenorhabditis elegans Hypothetical
protein F57A8.2b protein.
Length = 380
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Query: 85 NTKQTDSGPADRYQPTNYHNYPGTNSSND-HKIGYPSNKSGNQSLTSQGPGNYDKGPYGS 143
NT ++G + QP+ P + + GY S +S NQ G + + YG
Sbjct: 10 NTDSWNTGYSQPQQPSAPPAAPAAAPQDQSYGGGYYSQQSSNQGFDGYGQQSPTQNQYGG 69
Query: 144 QGHWKESSQYITKTDDF 160
G ++ Q + + F
Sbjct: 70 YGQQQQQQQSYGQNNGF 86
>Z70781-6|CAA94831.2| 349|Caenorhabditis elegans Hypothetical
protein F57A8.2a protein.
Length = 349
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Query: 85 NTKQTDSGPADRYQPTNYHNYPGTNSSND-HKIGYPSNKSGNQSLTSQGPGNYDKGPYGS 143
NT ++G + QP+ P + + GY S +S NQ G + + YG
Sbjct: 10 NTDSWNTGYSQPQQPSAPPAAPAAAPQDQSYGGGYYSQQSSNQGFDGYGQQSPTQNQYGG 69
Query: 144 QGHWKESSQYITKTDDF 160
G ++ Q + + F
Sbjct: 70 YGQQQQQQQSYGQNNGF 86
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Query: 105 YPGTNSSNDHKIGYPSNKSGNQSLTSQGP---GNYDKGPYGSQG 145
YPGT GYP +GP G + GP+G+QG
Sbjct: 334 YPGTKGGAGEP-GYPGRPGFEGDCGPEGPLGEGTGEAGPHGAQG 376
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical
protein K04H4.1a protein.
Length = 1759
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Query: 105 YPGTNSSNDHKIGYPSNKSGNQSLTSQGP---GNYDKGPYGSQG 145
YPGT GYP +GP G + GP+G+QG
Sbjct: 334 YPGTKGGAGEP-GYPGRPGFEGDCGPEGPLGEGTGEAGPHGAQG 376
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV)
collagen protein.
Length = 1758
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Query: 105 YPGTNSSNDHKIGYPSNKSGNQSLTSQGP---GNYDKGPYGSQG 145
YPGT GYP +GP G + GP+G+QG
Sbjct: 333 YPGTKGGAGEP-GYPGRPGFEGDCGPEGPLGEGTGEAGPHGAQG 375
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 81 SSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHK 115
+S S+ QT S P YQ +NY+ + ++ H+
Sbjct: 581 NSQSSQHQTKSIPVQNYQSSNYNKSYSSQTTTQHQ 615
>U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily
assigned gene nameprotein 224 protein.
Length = 465
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/69 (26%), Positives = 33/69 (47%)
Query: 58 VIKCLNGFRFGDKYIIKVEQVCKSSSSNTKQTDSGPADRYQPTNYHNYPGTNSSNDHKIG 117
VI L G R + ++ + K + N + ++ + R QPT +NY +S ++ + G
Sbjct: 86 VIGRLFGAREHFEKVLTKPGMYKPNEQNETKENNMMSTRSQPTAVYNYKMASSDSESERG 145
Query: 118 YPSNKSGNQ 126
+NK Q
Sbjct: 146 GSNNKENVQ 154
>U22832-2|AAA64509.2| 571|Caenorhabditis elegans Hypothetical
protein C09F5.1 protein.
Length = 571
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 88 QTDSGPADRYQPTNYHNYPGTNSSNDHKIGYPSNKSGNQSLTSQGPGNYD 137
+T P RY + N N+S D ++ YP N + G YD
Sbjct: 81 ETSPPPVQRYNVSGATNSSFLNTSGDSRVSYPGADRSNDTTVINNYG-YD 129
>AL031630-3|CAA20983.1| 140|Caenorhabditis elegans Hypothetical
protein Y38H6C.3 protein.
Length = 140
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 90 DSGPADRYQPTNYHNYPGTN 109
D PA R QP N H++P T+
Sbjct: 104 DEDPARRKQPLNLHDHPSTS 123
>AF003151-2|AAK18919.3| 277|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 24
protein.
Length = 277
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/61 (24%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Query: 124 GNQSLTSQGPGNYDKGPYGSQGHWKESSQYITKTDDFRASTNFNVDQAGYQAGHNQNQWG 183
G + S P G G+ G+W + + N N + G N N WG
Sbjct: 98 GGNPVYSDNPKQIQNGG-GNSGNWNSGGNNNGASGGSWGNGNANNNNNNNNGGSNNNGWG 156
Query: 184 N 184
N
Sbjct: 157 N 157
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.131 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,589,935
Number of Sequences: 27539
Number of extensions: 245366
Number of successful extensions: 603
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 558
Number of HSP's gapped (non-prelim): 72
length of query: 203
length of database: 12,573,161
effective HSP length: 78
effective length of query: 125
effective length of database: 10,425,119
effective search space: 1303139875
effective search space used: 1303139875
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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