GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000099-TA|BGIBMGA000099-PA|undefined
         (182 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    29   0.017
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.1  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    23   1.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.0  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 29.5 bits (63), Expect = 0.017
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 7/76 (9%)

Query: 11  DKPNLIPQSLNEHSPLDRSNTPTKDKKQEPKSQVTSGRKVLSKRKGDEELMMVNKKCKLS 70
           + P +   S    +P  R  +PT DK QE       G  V+ K   +EE +  +   K+ 
Sbjct: 831 EPPGVPLNSTPRSTPDKREKSPTSDKAQE-----ADGEVVVKKEVDEEERLENHTSVKIK 885

Query: 71  TELENLIRNRQEPSKH 86
            E E+  R+  E S H
Sbjct: 886 REAED--RDEDERSFH 899



 Score = 22.6 bits (46), Expect = 2.0
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 126 KPNMPANPDLLISDKPNLIPQSLNQHSPLDRSNTTTKEKKQEPKSQ 171
           K +  ++ D++   KP   P     + PLD S ++ K    +  SQ
Sbjct: 214 KSDADSDSDVVNLSKPGTPPSGEPGNGPLDLSVSSRKRSNDDSVSQ 259


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)

Query: 28  RSNTPTKDKKQEPKSQVTSGRKVLSKRKGDEELMMVNKKCKLSTELENLIRNRQEPSKHP 87
           R+N  T+ KK++ K     G   + K +    L   N+ CK     E L   R     H 
Sbjct: 549 RANA-TRGKKRKRKQDPADGGNSMKKCRARYGLDQQNQWCKPCRPREQLTWRRNFHGPHR 607

Query: 88  LSVDS 92
           L+  S
Sbjct: 608 LAARS 612


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)

Query: 28  RSNTPTKDKKQEPKSQVTSGRKVLSKRKGDEELMMVNKKCKLSTELENLIRNRQEPSKHP 87
           R+N  T+ KK++ K     G   + K +    L   N+ CK     E L   R     H 
Sbjct: 441 RANA-TRGKKRKRKQDPADGGNSMKKCRARYGLDQQNQWCKPCRPREQLTWRRNFHGPHR 499

Query: 88  LSVDS 92
           L+  S
Sbjct: 500 LAARS 504


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)

Query: 5   PDLLISDKPNLIPQSLNEHSP 25
           PDLL  D    +P  +NE  P
Sbjct: 101 PDLLKFDPDRFLPDKVNERHP 121


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 51  LSKRKGDEELMMVNKKCKLSTELENLIR 78
           +SK K  E +M + K C L   L  LI+
Sbjct: 200 ISKYKHAELVMPLCKSCDLHHRLSKLIK 227


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.305    0.124    0.343 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,028
Number of Sequences: 317
Number of extensions: 1877
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 182
length of database: 114,650
effective HSP length: 53
effective length of query: 129
effective length of database: 97,849
effective search space: 12622521
effective search space used: 12622521
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.0 bits)
S2: 41 (20.6 bits)