GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000099-TA|BGIBMGA000099-PA|undefined
         (182 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   1.4  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    23   5.6  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   7.3  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   7.3  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 8/37 (21%), Positives = 23/37 (62%)

Query: 142 NLIPQSLNQHSPLDRSNTTTKEKKQEPKSQETSGRKV 178
           +++ +   QH P +  + +++E++++P  Q+T   +V
Sbjct: 444 SIVTELFPQHPPFNWPSISSEEEQEQPADQQTPWTQV 480


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
          protein.
          Length = 298

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 19 SLNEHSPLDRSNTPTKDKKQEPKSQVTSGRK 49
          S+++H PL + N   + ++Q  K Q    RK
Sbjct: 42 SVDDHQPLQQKNLQQQRREQLNKEQHRLARK 72


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 10  SDKPNLIPQSLNEHSPLDRSNTPTKD 35
           S +P+  PQ L+  S   + N PT D
Sbjct: 447 SSQPHQQPQQLSSSSSQGQGNQPTVD 472


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 112 ETNPIRQPKVMTEIKPNMPANPDLLISD 139
           E +PI   ++++++ PN P  P   +SD
Sbjct: 389 EKDPIELGRIVSDLFPNHPPVPWPYVSD 416


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.305    0.124    0.343 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,288
Number of Sequences: 2123
Number of extensions: 7088
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 182
length of database: 516,269
effective HSP length: 60
effective length of query: 122
effective length of database: 388,889
effective search space: 47444458
effective search space used: 47444458
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
S2: 45 (22.2 bits)