Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000098-TA|BGIBMGA000098-PA|undefined
(299 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical p... 30 2.3
Z70284-12|CAB54278.1| 549|Caenorhabditis elegans Hypothetical p... 30 2.3
Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical p... 30 2.3
U28992-6|AAO38603.1| 1163|Caenorhabditis elegans Hypothetical pr... 30 2.3
U28992-5|AAO38602.1| 1185|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical pr... 29 3.0
U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 29 5.3
AC024751-6|AAK21506.1| 270|Caenorhabditis elegans Hypothetical ... 28 9.3
>Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical
protein B0365.1 protein.
Length = 1099
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 30 KFKKHKGRLVSEMRELMYGYAQHRRMDIYKRLLQVELCRNIALIHEENGYDCMDVENRPR 89
K + +GRL + + E + ++ M I + E CR++ + +E+ G D DVE + R
Sbjct: 93 KVGQTEGRLHTFIVEPFCAHTENEEMYI---AIYSERCRDVIMFYEQGGVDIGDVEEKAR 149
Query: 90 GCAV 93
V
Sbjct: 150 SVHV 153
>Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical
protein K07F5.13c protein.
Length = 639
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 158 FTPQQIRGTNIRNDGPTLNLLDKAILKDKYRVIPNLKTAQSEITREMRGI---IDEKV 212
F I+ I ND P + L+ + DK RV+P + ++++ R + + IDE++
Sbjct: 393 FVAGAIKLAQILNDAPKMTQLESQLQVDKTRVLPKVGMSKAQRDRYLETVPDGIDERI 450
>Z70284-12|CAB54278.1| 549|Caenorhabditis elegans Hypothetical
protein K07F5.13b protein.
Length = 549
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 158 FTPQQIRGTNIRNDGPTLNLLDKAILKDKYRVIPNLKTAQSEITREMRGI---IDEKV 212
F I+ I ND P + L+ + DK RV+P + ++++ R + + IDE++
Sbjct: 303 FVAGAIKLAQILNDAPKMTQLESQLQVDKTRVLPKVGMSKAQRDRYLETVPDGIDERI 360
>Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical
protein K07F5.13a protein.
Length = 612
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 158 FTPQQIRGTNIRNDGPTLNLLDKAILKDKYRVIPNLKTAQSEITREMRGI---IDEKV 212
F I+ I ND P + L+ + DK RV+P + ++++ R + + IDE++
Sbjct: 366 FVAGAIKLAQILNDAPKMTQLESQLQVDKTRVLPKVGMSKAQRDRYLETVPDGIDERI 423
>U28992-6|AAO38603.1| 1163|Caenorhabditis elegans Hypothetical
protein T05C1.4b protein.
Length = 1163
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/30 (33%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 57 IYKRLLQVELCRNIALI-HEENGYDCMDVE 85
++KRLL ++LC + +I H + +DC+ ++
Sbjct: 9 LFKRLLTLQLCHHFDIIPHRDQSFDCVQMQ 38
>U28992-5|AAO38602.1| 1185|Caenorhabditis elegans Hypothetical
protein T05C1.4a protein.
Length = 1185
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/30 (33%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 57 IYKRLLQVELCRNIALI-HEENGYDCMDVE 85
++KRLL ++LC + +I H + +DC+ ++
Sbjct: 9 LFKRLLTLQLCHHFDIIPHRDQSFDCVQMQ 38
>Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical
protein DY3.5 protein.
Length = 796
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/63 (26%), Positives = 24/63 (38%)
Query: 119 RDSMWPNRLGFSYTLRDILRSVNPNQMQQYRQIDYNDTVFTPQQIRGTNIRNDGPTLNLL 178
+DS +PN+ + S Q Y Q V P QI N+ L++L
Sbjct: 253 QDSFYPNQAALTAAATSFATSAAQQYAQTYSQQQQQQQVQAPAQIDQANLAKYSQYLDIL 312
Query: 179 DKA 181
KA
Sbjct: 313 QKA 315
>U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical
protein F55F8.7 protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 6 KENKITETPMEDENNEEPDWP 26
KE KI++T +DE+NE+P P
Sbjct: 140 KEKKISKTESDDEDNEQPPEP 160
>AC024751-6|AAK21506.1| 270|Caenorhabditis elegans Hypothetical
protein Y18H1A.2 protein.
Length = 270
Score = 27.9 bits (59), Expect = 9.3
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 5 EKENKITETPMEDENNEEPDWPHIPKFKKHKGRLVSEMRELMYGYAQHRRMDIY----KR 60
E++ K ++ E++ + K KKH+ R SE R+L Y + RR + +R
Sbjct: 158 ERKRKREDSDSEEKAKKRHKKDKKKKKKKHRHRDSSEERQLEEEYDRERRQKLASMRDER 217
Query: 61 LL--QVELCRNIALIHEE 76
L +VE R AL+H E
Sbjct: 218 LKRERVEKARAHALLHPE 235
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.136 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,330,198
Number of Sequences: 27539
Number of extensions: 301824
Number of successful extensions: 892
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 884
Number of HSP's gapped (non-prelim): 11
length of query: 299
length of database: 12,573,161
effective HSP length: 81
effective length of query: 218
effective length of database: 10,342,502
effective search space: 2254665436
effective search space used: 2254665436
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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