GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000094-TA|BGIBMGA000094-PA|IPR000276|Rhodopsin-like GPCR
superfamily
         (120 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   0.35 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   0.81 
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   1.9  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   2.5  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   4.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    20   5.7  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    20   7.5  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    20   7.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    19   10.0 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    19   10.0 

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 24.2 bits (50), Expect = 0.35
 Identities = 16/74 (21%), Positives = 37/74 (50%), Gaps = 8/74 (10%)

Query: 47  AQINRQKLFKENRKSECKRLRDSNCTTLMLIVVVTVFLLVEIPVAVVTILH------IIS 100
           A+  +   F  ++   C  L ++  + L  + ++ +F +  IP+ ++ IL+      ++S
Sbjct: 209 AEYKQLDYFDGSKVPACHTLANTFWSALYFLTIIFLFFI--IPLIILLILYCIIAKNLMS 266

Query: 101 STIVEILDYHIANI 114
           +    +L+ HI NI
Sbjct: 267 NAATLVLNKHIDNI 280


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.0 bits (47), Expect = 0.81
 Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%)

Query: 13  YFISYFGFRVLFVHLIP-CTSLVVLN 37
           YF   FG+ +LF H+   C +L+ ++
Sbjct: 150 YFNRIFGWNILFGHIFTVCRTLIYID 175


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 8/24 (33%), Positives = 17/24 (70%)

Query: 53  KLFKENRKSECKRLRDSNCTTLML 76
           K++ +NR+++ KRL+++    L L
Sbjct: 160 KIWFQNRRAKAKRLQEAELEKLRL 183


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 72  TTLMLIVVVTVFLLVEIPVAVVTILHI 98
           T  M +V+V VF+L   P  V  +L +
Sbjct: 284 TVKMTLVIVFVFVLCWSPYIVFDLLQV 310


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 10/39 (25%), Positives = 21/39 (53%)

Query: 63  CKRLRDSNCTTLMLIVVVTVFLLVEIPVAVVTILHIISS 101
           C+  +  N   L L+V +T+  +V +    VT+  I+++
Sbjct: 204 CRLFKIDNSLILDLLVFITINFVVLLGDLYVTLYIILTN 242


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 26  HLIPCTSLVVLNVLLFRAMRTAQINRQK 53
           HL P  +LVV N++    +    +N Q+
Sbjct: 162 HLYPVVALVVKNLIKPTILGADWLNEQR 189


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 19.8 bits (39), Expect = 7.5
 Identities = 8/27 (29%), Positives = 15/27 (55%)

Query: 72  TTLMLIVVVTVFLLVEIPVAVVTILHI 98
           T  +  V+V+VF+L   P  +  +L +
Sbjct: 249 TIKITFVIVSVFILCWSPYIIFDLLQV 275


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 19.8 bits (39), Expect = 7.5
 Identities = 7/21 (33%), Positives = 16/21 (76%)

Query: 90  VAVVTILHIISSTIVEILDYH 110
           +A+++IL I+S+   +++ YH
Sbjct: 6   LALLSILGIVSAATNKVVCYH 26


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.4 bits (38), Expect = 10.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 82  VFLLVEIPVAVVTILHIISSTIVEI 106
           +F+       VV I H+  STI E+
Sbjct: 912 IFVSTLYTANVVCICHVCYSTIQEV 936


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 19.4 bits (38), Expect = 10.0
 Identities = 7/31 (22%), Positives = 18/31 (58%)

Query: 87  EIPVAVVTILHIISSTIVEILDYHIANILVL 117
           ++ +       +  STI+++LD  +A ++V+
Sbjct: 286 QVKITAADFFILDKSTILKVLDTVVAFLMVV 316


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.335    0.143    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,783
Number of Sequences: 317
Number of extensions: 816
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 120
length of database: 114,650
effective HSP length: 50
effective length of query: 70
effective length of database: 98,800
effective search space:  6916000
effective search space used:  6916000
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (21.1 bits)
S2: 38 (19.4 bits)