GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000094-TA|BGIBMGA000094-PA|IPR000276|Rhodopsin-like GPCR
superfamily
         (120 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    50   3e-08
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    33   0.003
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    25   0.55 
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    24   1.7  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    22   5.1  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    22   5.1  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    22   5.1  
AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside ...    21   8.9  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 49.6 bits (113), Expect = 3e-08
 Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 9/97 (9%)

Query: 22  VLFVHLIPCTSLVVLNVLLFRAMRTAQINRQKLFKENRKSECKRLRDSNCTTLMLIVVVT 81
           ++FV+ +P + +   N++++R +R A   RQ+L +  +       R+    T MLI VV 
Sbjct: 267 MIFVYFLPFSLISFFNLMIYRQVRRANKERQRLSRSEK-------REIGLAT-MLICVVI 318

Query: 82  VFLLVEIPVAVVTILHIISSTIVEILDYHIANILVLI 118
           VFLL  +P  ++ I+    S I+E +   ++N+LV I
Sbjct: 319 VFLLCNLPAMMINIVEAFYSLIIEYM-VKVSNLLVTI 354


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 33.1 bits (72), Expect = 0.003
 Identities = 25/100 (25%), Positives = 52/100 (52%), Gaps = 16/100 (16%)

Query: 15  ISYFGFRVLFVHLIPCTSLVVLNVLLFRAMRTAQINRQKL---------FKENRKSECK- 64
           ++++ + V+F  LIPC +L +L++ L  A+  A+  R +L           + R  + K 
Sbjct: 247 VNFWIYSVVF-KLIPCIALTILSLRLIGALLEAKQRRSQLTGTATGLKQIVDGRVVDAKA 305

Query: 65  -----RLRDSNCTTLMLIVVVTVFLLVEIPVAVVTILHII 99
                + + ++ TT ML+ V+ +FL+ E P  ++ +L  +
Sbjct: 306 GKQTDKEKQTDRTTRMLLAVLLLFLITEFPQGILGLLSAV 345


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 25.4 bits (53), Expect = 0.55
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 36  LNVLLFRAMRTAQINRQKLFKENRKSECKRLRDSNCTTLMLIVVVTVFLLVEIPVAVVTI 95
           +N+ LF A+ T  +   +L       E + L      T ML++V +VF+ + +P  V+ +
Sbjct: 286 INITLF-ALFTLSLRYDRLLYRTA-GENRMLHSQMKVTKMLLIVSSVFVCLNLPSYVMRV 343


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/23 (39%), Positives = 16/23 (69%)

Query: 73  TLMLIVVVTVFLLVEIPVAVVTI 95
           T ML++V TVF+ + +P  +V +
Sbjct: 372 TKMLLIVSTVFVCLNLPSYIVRV 394


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 12/21 (57%), Positives = 14/21 (66%)

Query: 15  ISYFGFRVLFVHLIPCTSLVV 35
           IS   F +L V +IP TSLVV
Sbjct: 283 ISLHVFFLLVVEIIPPTSLVV 303


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 12/21 (57%), Positives = 14/21 (66%)

Query: 15  ISYFGFRVLFVHLIPCTSLVV 35
           IS   F +L V +IP TSLVV
Sbjct: 283 ISLHVFFLLVVEIIPPTSLVV 303


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 72  TTLMLIVVVTVFLLVEIPVAVVTILHI 98
           T  M IV+V VF+L   P  +  +L +
Sbjct: 452 TVKMTIVIVIVFVLCWSPYIIFDLLQV 478


>AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside
           phosphorylase protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 11  DAYFISYFGFRVLFVHLIPCTSLVVLN 37
           + Y ++     V  +HLI CT L+  N
Sbjct: 154 EGYPLAKCAMPVRVMHLIGCTHLIATN 180


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.335    0.143    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,032
Number of Sequences: 2123
Number of extensions: 2910
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 9
length of query: 120
length of database: 516,269
effective HSP length: 57
effective length of query: 63
effective length of database: 395,258
effective search space: 24901254
effective search space used: 24901254
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.6 bits)
S2: 43 (21.4 bits)