Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000094-TA|BGIBMGA000094-PA|IPR000276|Rhodopsin-like GPCR
superfamily
(120 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 28 0.034
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 27 0.059
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 24 0.55
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 0.72
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 0.96
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 1.7
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 1.7
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 22 2.2
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 2.9
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 3.9
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 3.9
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 5.1
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 5.1
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 5.1
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 20 6.7
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 20 6.7
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 20 8.9
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 20 8.9
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 27.9 bits (59), Expect = 0.034
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 63 CKRLRDSNCTTLMLIVVVTVFLLVEIPVAVVTIL 96
C +R+S+C T+ + LLV+I VAV +
Sbjct: 71 CGAIRESHCMTITFASFLLFILLVQIAVAVYAFI 104
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 27.1 bits (57), Expect = 0.059
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 56 KENRKSECKRLRDSNCTTLMLIVVVTVFLLVEIPVAVV 93
KE +KSE K + D TT +VV V + P V
Sbjct: 809 KEQKKSEEKNINDHCVTTEQSVVVTNVTTTINTPTTSV 846
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 23.8 bits (49), Expect = 0.55
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 28 IPCTSLVVLNVLLFRAMRTAQINRQKLFKENRK 60
IPC +V L +F+A+R NR + + NRK
Sbjct: 354 IPCIIMVFLYYNIFKALR----NRARKARANRK 382
Score = 21.0 bits (42), Expect = 3.9
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 68 DSNCTTLMLIVVV---TVFLLVEIPVAVVTILHIISSTIVEILDYHIANILVLIL 119
D+N +++V+V T+F V + +AVV + + T I+ +A++LV +L
Sbjct: 184 DANSWWALILVIVPCLTLFGNVLVILAVVRERALQTVTNYFIVSLAVADLLVAVL 238
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.4 bits (48), Expect = 0.72
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 26 HLIPCTSLVVLNVLLFRAMRTAQINRQKLFKENRKSECKRL 66
HLI ++ + L + + + R+K+ +E RK++ K L
Sbjct: 435 HLIEYKKMLKIKRLFGKDRKIMDMVREKIIEEKRKNKNKNL 475
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.0 bits (47), Expect = 0.96
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 53 KLFKENRKSECKRLRDSNCTTLMLIVVVTVFLLVEIP 89
K+ K N K++ KR R L ++V F+L +P
Sbjct: 436 KMGKRNIKAQVKRFRMETKAAKTLGIIVGGFILCWLP 472
Score = 21.4 bits (43), Expect = 2.9
Identities = 17/96 (17%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 21 RVLFVHLIPCTSLVVLNVLLFRAMRTAQINRQKLFKENRKSECKRLRDSNCTTLMLIVVV 80
R +FV +P S + R + + ++++++ ++ + L + C L V
Sbjct: 2 RSVFVAFLPVKSFRESRCSV-RCSAASGLRWFEIWRDSLPTKMRELNATACAALYERVEW 60
Query: 81 TV--FLLVEIPVAVVTILHIISSTIVEILDYHIANI 114
+ L+ I +A+V ++ ++ + +V + YH + +
Sbjct: 61 SGPWILVTLIVLAIVNVMVVLGNVLVILAVYHTSKL 96
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 1.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 15 ISYFGFRVLFVHLIPCTSLVV 35
IS F +L V +IP TSLVV
Sbjct: 284 ISLHVFFLLVVEIIPPTSLVV 304
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 1.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 15 ISYFGFRVLFVHLIPCTSLVV 35
IS F +L V +IP TSLVV
Sbjct: 284 ISLHVFFLLVVEIIPPTSLVV 304
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 21.8 bits (44), Expect = 2.2
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 53 KLFKENRKSECKRLRDSNCTTLML 76
K++ +NR+++ KRL+++ L L
Sbjct: 54 KIWFQNRRAKAKRLQEAEIEKLRL 77
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 2.9
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 32 SLVVLNVLLFRAMRTAQINRQKLF 55
SL++LN ++ + + Q+N LF
Sbjct: 11 SLIILNDEIYNIIASPQLNNPTLF 34
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.0 bits (42), Expect = 3.9
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 27 LIPCTSLVVLNVLLF 41
++PC S+ L+VL F
Sbjct: 243 IVPCVSISYLSVLAF 257
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.0 bits (42), Expect = 3.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 27 LIPCTSLVVLNVLLF 41
+IPC + L VL+F
Sbjct: 257 IIPCVGITFLTVLVF 271
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 20.6 bits (41), Expect = 5.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 29 PCTSLVVLNVLLFRAMRTAQINRQKL 54
PC LVVL+ + F R A +R L
Sbjct: 223 PCVLLVVLSWVSFWLNREATADRVSL 248
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 20.6 bits (41), Expect = 5.1
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 27 LIPCTSLVVLNVLLF 41
+IPC + L+VL+F
Sbjct: 244 IIPCVGISFLSVLVF 258
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 20.6 bits (41), Expect = 5.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 91 AVVTILHIISSTIVEILDYHIAN 113
A V +LH V I+D+H A+
Sbjct: 344 ANVAVLHSFQMKNVTIVDHHTAS 366
Score = 19.8 bits (39), Expect = 8.9
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 97 HIISSTIVEILDYHIANI 114
H S ++ + DY I+NI
Sbjct: 494 HAFHSQVLSMSDYDISNI 511
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 20.2 bits (40), Expect = 6.7
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 19 GFRVLFVHLIPCTSLVVLNVLLFRAMRTAQINR 51
G+ ++ V+ +PC +VVL+ + F R A +R
Sbjct: 245 GYFLIQVY-VPCVLIVVLSWVSFWIHREATSDR 276
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 20.2 bits (40), Expect = 6.7
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 7 ALSVDAYFISYFGFRVLFVHLIPCTSLVV 35
+LS+ + +S F +L +IP TSLVV
Sbjct: 273 SLSI-SILLSLTVFFLLLAEIIPPTSLVV 300
Score = 19.8 bits (39), Expect = 8.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 27 LIPCTSLVVLNVLLF 41
+IPC + L VL+F
Sbjct: 248 IIPCMGISFLTVLVF 262
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 19.8 bits (39), Expect = 8.9
Identities = 5/14 (35%), Positives = 13/14 (92%)
Query: 106 ILDYHIANILVLIL 119
++DY+I +IL++++
Sbjct: 235 MMDYYIPSILIVVI 248
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 19.8 bits (39), Expect = 8.9
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 12 AYFISYFGFRVLFVHLIPCT 31
++FI F + ++ + L+P T
Sbjct: 412 SFFIVIFTYIIILITLVPST 431
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.335 0.143 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,367
Number of Sequences: 429
Number of extensions: 976
Number of successful extensions: 23
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of query: 120
length of database: 140,377
effective HSP length: 51
effective length of query: 69
effective length of database: 118,498
effective search space: 8176362
effective search space used: 8176362
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.6 bits)
S2: 39 (19.8 bits)
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