Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000093-TA|BGIBMGA000093-PA|IPR000276|Rhodopsin-like GPCR
superfamily
(178 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 31 0.006
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 31 0.008
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 30 0.011
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 29 0.026
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 29 0.026
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 29 0.034
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 24 0.97
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 24 0.97
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 21 5.2
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 6.9
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 6.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 6.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 6.9
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 31.1 bits (67), Expect = 0.006
Identities = 12/49 (24%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 77 VANTLIV-VVLSRRHMRTPTNAVLMAMALCDMFTMLFPAPWLFYMYTFG 124
+ N L++ + + + +RTP+N ++ +A+CD F M+ +++ + G
Sbjct: 64 LGNGLVIWIFCAAKSLRTPSNMFVVNLAICDFFMMIKTPIFIYNSFNTG 112
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 30.7 bits (66), Expect = 0.008
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 65 GYIAPFLLATTTVANTLIVVV-LSRRHMRTPTNAVLMAMALCDMFTMLFPAP 115
G++ L + + N ++V + LS + +RTP+N ++ +A+ D M +P
Sbjct: 22 GFVIGMLGFVSVMGNGMVVYIFLSTKSLRTPSNLFVINLAISDFLMMFCMSP 73
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 30.3 bits (65), Expect = 0.011
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 71 LLATTTVANTLIVVVLSRR-HMRTPTNAVLMAMALCDMFTMLFPAPWLFYMYTFGNHYKP 129
+ T V N + +V+ R M+TPTN L +A+ D+ ++ P F + F Y
Sbjct: 43 IFVTGFVGNIITCIVIWRNPSMQTPTNYYLFNLAVSDLLFLILGLP--FELSVFWQQYPW 100
Query: 130 LSPVRACQAWNYMNE 144
+ C+ Y++E
Sbjct: 101 QWGLGICKLRAYVSE 115
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 29.1 bits (62), Expect = 0.026
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 67 IAPFLLATTTVANTLIVVVLSR-RHMRTPTNAVLMAMALCDMFTMLFPAPWL 117
I LL + V N ++ + S + +RTP+N ++++A+ D+ M F P L
Sbjct: 63 IYSMLLIMSLVGNCCVIWIFSTSKSLRTPSNMFIVSLAIFDII-MAFEMPML 113
Score = 25.4 bits (53), Expect = 0.32
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 70 FLLATTTVANTLIVVVLSRRHMRTPTNAVLMAM 102
FLLA T A ++ V R + TP + +L A+
Sbjct: 291 FLLAWTPYATVALIGVYGNRELLTPVSTMLPAV 323
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 29.1 bits (62), Expect = 0.026
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 67 IAPFLLATTTVANTLIVVVLSR-RHMRTPTNAVLMAMALCDMFTMLFPAPWL 117
I LL + V N ++ + S + +RTP+N ++++A+ D+ M F P L
Sbjct: 63 IYSMLLIMSLVGNCCVIWIFSTSKSLRTPSNMFIVSLAIFDII-MAFEMPML 113
Score = 25.4 bits (53), Expect = 0.32
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 70 FLLATTTVANTLIVVVLSRRHMRTPTNAVLMAM 102
FLLA T A ++ V R + TP + +L A+
Sbjct: 291 FLLAWTPYATVALIGVYGNRELLTPVSTMLPAV 323
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 28.7 bits (61), Expect = 0.034
Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 65 GYIAPFLLATTTVANTLIVVV-LSRRHMRTPTNAVLMAMALCDMFTMLFPAP 115
G++ L + + N ++V + LS + +RTP+N ++ +A+ + M +P
Sbjct: 56 GFVIGMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFCMSP 107
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 23.8 bits (49), Expect = 0.97
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 16 KPFNYSINENITYFDYTNFTSDDFCASNNSHVYLNVTCEFAISYAEPMYG 65
K FN ++ + + F Y NF SD SNN V ++ F + + +G
Sbjct: 518 KAFN-NVPKKLNMF-YNNFNSDIKSISNNEQVKVSALGFFILISQDAKFG 565
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.8 bits (49), Expect = 0.97
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 16 KPFNYSINENITYFDYTNFTSDDFCASNNSHVYLNVTCEFAISYAEPMYG 65
K FN ++ + + F Y NF SD SNN V ++ F + + +G
Sbjct: 518 KAFN-NVPKKLNMF-YNNFNSDIKSISNNEQVKVSALGFFILISQDAKFG 565
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 21.4 bits (43), Expect = 5.2
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 114 APWLFYMYTFGNHYKPLSPVRACQA 138
A W +Y Y + + P P C+A
Sbjct: 211 ANWGYYAYPYCYNLTPNQPSAQCEA 235
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.0 bits (42), Expect = 6.9
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 92 RTPTNAVLMAMALCDMFTMLFPAPWLFYMYTFGNHYKPLS 131
+ P + + +A + + + FP + ++ F HYK S
Sbjct: 450 KEPPHPIRVAKTIDVIARITFPVAYFMFLTFFFIHYKGTS 489
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 6.9
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 92 RTPTNAVLMAMALCDMFTMLFPAPWLFYMYTFGNHYKPLS 131
+ P + + +A + + + FP + ++ F HYK S
Sbjct: 436 KEPPHPIRVAKTIDVIARITFPVAYFMFLTFFFIHYKGTS 475
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.0 bits (42), Expect = 6.9
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 92 RTPTNAVLMAMALCDMFTMLFPAPWLFYMYTFGNHYKPLS 131
+ P + + +A + + + FP + ++ F HYK S
Sbjct: 470 KEPPHPIRVAKTIDVIARITFPVAYFMFLTFFFIHYKGTS 509
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.0 bits (42), Expect = 6.9
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 92 RTPTNAVLMAMALCDMFTMLFPAPWLFYMYTFGNHYKPLS 131
+ P + + +A + + + FP + ++ F HYK S
Sbjct: 419 KEPPHPIRVAKTIDVIARITFPVAYFMFLTFFFIHYKGTS 458
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.327 0.135 0.427
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,058
Number of Sequences: 429
Number of extensions: 2962
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 15
length of query: 178
length of database: 140,377
effective HSP length: 54
effective length of query: 124
effective length of database: 117,211
effective search space: 14534164
effective search space used: 14534164
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 41 (20.6 bits)
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