Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000092-TA|BGIBMGA000092-PA|IPR007243|Autophagy protein
Apg6, IPR013819|Lipoxygenase, C-terminal
         (427 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   5.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   5.5  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   7.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   7.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   7.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   9.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   9.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 3/65 (4%)

Query: 347 LDCLQQFKEQVEMGNTGFCLPYRIDKGKIEDTASPPHAYSIKIQFNSEEHWTKALKYMLT 406
           L C +        G   + L  +   G+I   A+    Y   +++ ++E   K + YM T
Sbjct: 586 LSCAENMMFDPMSGKCEYSLGEKCRPGQIIQVANSLRQYEDLLEYEAKEEGPKVVCYM-T 644

Query: 407 NLKWA 411
           N  WA
Sbjct: 645 N--WA 647


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 274 DWSEINAAWGQTVLLLSSLARKINF 298
           +W ++  AW +  LL+ +L  + NF
Sbjct: 417 EWPQLMKAWLKIELLVGNLGMRRNF 441


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 41  RRNNEADLDLQSSSLDHYV 59
           RRN E+  + QSSSL  ++
Sbjct: 333 RRNRESTTNTQSSSLSEFL 351


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)

Query: 411 ALTWISSQFCEDKSE 425
           A+ WI+S+ CE+ S+
Sbjct: 340 AIVWITSETCEEVSK 354


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 7/52 (13%)

Query: 367 PYRIDKGKIEDTASPPHAYSIKIQFNSEEHWTKALKYMLTNLKWALTWISSQ 418
           PY + + K    + PPH Y      N  +H  +A  Y      ++ TW + Q
Sbjct: 267 PYPMQRPKSASLSPPPHVY------NPPDHIQQATPYSAPGPTYS-TWSTVQ 311


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 18  PLKLDDSLNNLGEHTIADLTLQIRRNNEADLDLQSS 53
           P  + +   N  E    DL++++ +NN+  LDL  +
Sbjct: 280 PFTIVEPKLNKHEDLPQDLSMKLSKNNDQCLDLSKT 315


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 18  PLKLDDSLNNLGEHTIADLTLQIRRNNEADLDLQSS 53
           P  + +   N  E    DL++++ +NN+  LDL  +
Sbjct: 172 PFTIVEPKLNKHEDLPQDLSMKLSKNNDQCLDLSKT 207


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.133    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,207
Number of Sequences: 317
Number of extensions: 3691
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 7
length of query: 427
length of database: 114,650
effective HSP length: 59
effective length of query: 368
effective length of database: 95,947
effective search space: 35308496
effective search space used: 35308496
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)