Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000092-TA|BGIBMGA000092-PA|IPR007243|Autophagy protein
Apg6, IPR013819|Lipoxygenase, C-terminal
(427 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0424 + 8338117-8339649,8341274-8341378,8341404-8341574 124 2e-28
01_06_0272 - 28065896-28065991,28066069-28066227,28066918-280669... 100 3e-21
03_05_0469 + 24640925-24641081,24641292-24641644,24641870-246420... 86 6e-17
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 30 3.1
02_05_0421 + 28827856-28828009,28828453-28828529,28828642-288286... 30 4.1
05_03_0076 + 8164466-8164511,8164643-8164698,8165529-8165867,816... 29 7.1
03_05_0832 - 28037047-28037315,28037428-28037530,28037664-280376... 29 7.1
06_01_1073 - 8762470-8762535,8762743-8762814,8762902-8763009,876... 29 9.4
>03_02_0424 + 8338117-8339649,8341274-8341378,8341404-8341574
Length = 602
Score = 124 bits (298), Expect = 2e-28
Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 17/305 (5%)
Query: 87 GHQLHVKATL----FDLLSNNSYVDHPLCDECTDTLLELMDNQLKQTEAEWXXXXX-XXX 141
G+ H T+ F++ ++ + V+ P+C C L + MD +++ A+
Sbjct: 207 GNSFHSNVTVLKRAFEIATSQTQVEQPMCLGCMRLLSDKMDKEIEDVNADIKAHEVCLQH 266
Query: 142 XXXXXXXXXXXXXXXXXXXXWKQEQSRXXXXXXXXXXXXRAMNXXXXXXXXXXXXLDKEQ 201
++E+ + ++ ++ +
Sbjct: 267 LEQESYNVLSDAGFQEEKLKIEEEEKKLNAAIEEAEKQYSEISSEMKDLEIKSKEFEELE 326
Query: 202 DVYWREYTKYRKDLMTTEDQMKFYECQLAYTQSQLEKLKKTNVFKATFHISDSGQFGIIN 261
+ YW E+ ++ L + +++ + ++ +Q LE LK+ NV F+IS G G IN
Sbjct: 327 ERYWHEFNSFQFQLTSHQEEREAILAKIEVSQVHLELLKRRNVLNDAFYISHDGVIGTIN 386
Query: 262 NFRLGRLPTAPVDWSEINAAWGQTVLLLSSLARKINFNFQ-RYKLVPYGNHSYIEVLED- 319
NFRLGRLP V+W EINAAWGQ LLL ++A+ F+ R K+ P G+++ + +
Sbjct: 387 NFRLGRLPNVQVEWDEINAAWGQAALLLHTMAQYFTPKFEYRIKIHPMGSYARVTDIHKN 446
Query: 320 --QKVLPLYGSGGFRFLWDTKFDAAMVAFLDCLQQFKE---QVEMGNT-----GFCLPYR 369
+ + L G W T+FD AM FL CLQ F E ++ N LPY+
Sbjct: 447 TYELYIMLTRFGPVDLFWSTRFDKAMTWFLTCLQDFAEFAISLDKENNVPPEKSLKLPYK 506
Query: 370 IDKGK 374
ID K
Sbjct: 507 IDGDK 511
>01_06_0272 -
28065896-28065991,28066069-28066227,28066918-28066966,
28067350-28067474,28067834-28068004,28068222-28068571,
28069322-28069478
Length = 368
Score = 100 bits (239), Expect = 3e-21
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 5/220 (2%)
Query: 87 GHQLHVKATL----FDLLSNNSYVDHPLCDECTDTLLELMDNQLKQTEAEWXXXXX-XXX 141
G+ H T+ F++ ++ + V+ P+C +C L + MD +++ A+
Sbjct: 147 GNSFHSNVTVLKRAFEIATSQTQVEQPMCLDCMRLLSDKMDKEIEDVNADIKAYEVCLQH 206
Query: 142 XXXXXXXXXXXXXXXXXXXXWKQEQSRXXXXXXXXXXXXRAMNXXXXXXXXXXXXLDKEQ 201
++E+ + ++ ++ +
Sbjct: 207 LEQESHTVLSDAGFQKEKLKIEEEEKKLNAAIEEAEKQYSEISSEMKDLEIKSKEFEELE 266
Query: 202 DVYWREYTKYRKDLMTTEDQMKFYECQLAYTQSQLEKLKKTNVFKATFHISDSGQFGIIN 261
+ YW E+ ++ L + +++ ++ +Q LE LK+TNV F+IS G G IN
Sbjct: 267 ERYWHEFNSFQFQLTSHQEERDAILAKIEVSQVHLELLKQTNVLNDAFYISHDGVIGTIN 326
Query: 262 NFRLGRLPTAPVDWSEINAAWGQTVLLLSSLARKINFNFQ 301
NFRLGRLP V+W EINAAWGQ LLL ++A+ F+
Sbjct: 327 NFRLGRLPNVQVEWDEINAAWGQAALLLHTMAQYFTPKFE 366
>03_05_0469 +
24640925-24641081,24641292-24641644,24641870-24642043,
24642382-24642506,24643011-24643059,24643741-24643899,
24644037-24644219
Length = 399
Score = 85.8 bits (203), Expect = 6e-17
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 6/214 (2%)
Query: 87 GHQLHVKATL----FDLLSNNSYVDHPLCDECTDTLLELMDNQLKQ--TEAEWXXXXXXX 140
G+ H T+ F++ ++ + ++ PLC +C L + M+ +++ T+ +
Sbjct: 148 GNNFHSSVTVLKRAFEIATSQTQIEQPLCLDCMRLLSDKMEKEIEDVNTDNKAYEACLQR 207
Query: 141 XXXXXXXXXXXXXXXXXXXXXWKQEQSRXXXXXXXXXXXXRAMNXXXXXXXXXXXXLDKE 200
++E+ + + ++
Sbjct: 208 LEQETYNILSETDFQKERQKVIEEEEKKLKAAIEEAEKQYSEICSEMKCLETKSKQFEEL 267
Query: 201 QDVYWREYTKYRKDLMTTEDQMKFYECQLAYTQSQLEKLKKTNVFKATFHISDSGQFGII 260
++ Y + ++ ++ +++ ++ +Q LE LK+TNV F+IS G G I
Sbjct: 268 EERYCHDLNSFQFQWISHQEERDAVLAKIEVSQVHLELLKRTNVLNDAFYISHDGVIGTI 327
Query: 261 NNFRLGRLPTAPVDWSEINAAWGQTVLLLSSLAR 294
NNFRLGRLP V+W EINAAWGQ LLL ++A+
Sbjct: 328 NNFRLGRLPNVQVEWDEINAAWGQAALLLHTMAQ 361
>07_03_1512 +
27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 30.3 bits (65), Expect = 3.1
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 261 NNFRLGRLPTAPVDWSEINAAWGQTVLLLSSLARKINFNFQRYKLVPYGNHSYIEVLEDQ 320
++FR GR P+ W E AA+ +T + +A K + ++ + G+ S E L D
Sbjct: 417 DHFRQGRAEGEPITWQEFTAAFKKTHIPTGVVALK----KREFRALNQGSRSVTEYLHDF 472
Query: 321 KVLPLYGSGGFR 332
L Y R
Sbjct: 473 NRLARYAPEDIR 484
>02_05_0421 +
28827856-28828009,28828453-28828529,28828642-28828699,
28828834-28828909,28829659-28829728,28829828-28830247
Length = 284
Score = 29.9 bits (64), Expect = 4.1
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 21 LDDSLNNLGEHTIADLTLQIRRNNEADLDLQSSSLDHYVPPFRMSESGNGANGFMVISDG 80
L+ + NNL L+ R D +L S + V ++ E NG + D
Sbjct: 165 LEKAQNNLSYDATGTANLEATRTQLTDFNLALSGFMNNVS--QVCEQNNGELAKAISEDN 222
Query: 81 WETTSLGHQLH 91
TT+LG QL+
Sbjct: 223 LRTTNLGFQLY 233
>05_03_0076 +
8164466-8164511,8164643-8164698,8165529-8165867,
8165938-8166012,8166674-8166846,8168697-8168795,
8169002-8169161,8169321-8169464,8169551-8169723,
8169796-8169991,8170061-8170258,8170864-8171016,
8171838-8171959,8172037-8172136,8172221-8172316,
8172400-8172530,8173717-8173819,8174373-8174555,
8174632-8174724,8174818-8174853,8175672-8175773,
8176310-8176472,8176557-8176678,8176994-8177158,
8177667-8177849,8178679-8178831,8179136-8179288,
8179373-8179444,8179530-8179664,8179739-8179800,
8179999-8180096,8180628-8180737,8180832-8181005,
8181092-8181157,8181847-8181915,8181989-8182099,
8182418-8182558,8182638-8182766,8182864-8183029,
8183174-8183388,8184883-8185089,8185501-8185572,
8185897-8186010,8186090-8186281,8186489-8186569,
8186654-8186728,8186812-8186878,8187292-8187452,
8187943-8188116,8188209-8188337,8188421-8188504,
8188589-8188650,8188728-8188800,8189008-8189142,
8189790-8189960,8190054-8190319,8190440-8190458
Length = 2448
Score = 29.1 bits (62), Expect = 7.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 283 GQTVLLLSSLARKINFNFQRYKLVPYGNHSYIEVLEDQ 320
G VL+ +L NFNF+ ++L+ + S I LED+
Sbjct: 469 GGPVLVQLALGTLANFNFKGHELLEFARESVILYLEDE 506
>03_05_0832 -
28037047-28037315,28037428-28037530,28037664-28037695,
28037788-28038005,28038145-28038260,28038514-28038757,
28039129-28039216,28039513-28039588,28040126-28040164,
28040347-28040405,28041292-28041529
Length = 493
Score = 29.1 bits (62), Expect = 7.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 300 FQRYKLVPYGNHSYIEVLEDQKVLPLYGSGGFRF 333
+ RYK +P+GN +Y + ED ++ +RF
Sbjct: 95 YHRYKRLPHGNRAYRQGTEDVNLMKSLNFDAYRF 128
>06_01_1073 -
8762470-8762535,8762743-8762814,8762902-8763009,
8763089-8763313
Length = 156
Score = 28.7 bits (61), Expect = 9.4
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Query: 315 EVLEDQKVLPLYGSGGFRFLWDTKFDAAMVAFLDCLQQFKEQVEMGNTG-FCLPYRIDKG 373
E +ED+ LY G LW T + + L + E V +G TG F Y + K
Sbjct: 77 EAIEDKPTFLLYSGGAVVALWLTTVVVGAINSVPLLPKILELVGLGYTGWFVYRYLLFKE 136
Query: 374 KIEDTASPPHAYSIKI 389
++ A+ KI
Sbjct: 137 SRKELATDIETLKKKI 152
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.133 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,029,751
Number of Sequences: 37544
Number of extensions: 417192
Number of successful extensions: 908
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 900
Number of HSP's gapped (non-prelim): 10
length of query: 427
length of database: 14,793,348
effective HSP length: 84
effective length of query: 343
effective length of database: 11,639,652
effective search space: 3992400636
effective search space used: 3992400636
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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