Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000092-TA|BGIBMGA000092-PA|IPR007243|Autophagy protein
Apg6, IPR013819|Lipoxygenase, C-terminal
(427 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42843-5|AAA83597.2| 375|Caenorhabditis elegans Beclin (human a... 120 1e-27
Z49127-11|CAA88952.2| 452|Caenorhabditis elegans Hypothetical p... 32 0.68
AL033535-4|CAA22134.2| 452|Caenorhabditis elegans Hypothetical ... 32 0.68
AC006619-4|AAY86197.1| 309|Caenorhabditis elegans Hypothetical ... 30 2.7
AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trn... 30 3.6
AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trn... 30 3.6
Z98851-3|CAB11538.2| 659|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z80219-6|CAI70409.1| 734|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z80219-4|CAB02302.2| 784|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z80219-3|CAE17938.1| 745|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z80219-1|CAB02301.2| 727|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z75546-11|CAI70402.1| 734|Caenorhabditis elegans Hypothetical p... 29 6.3
Z75546-10|CAA99896.2| 784|Caenorhabditis elegans Hypothetical p... 29 6.3
Z75546-9|CAE17895.1| 745|Caenorhabditis elegans Hypothetical pr... 29 6.3
AL110478-1|CAB54340.2| 537|Caenorhabditis elegans Hypothetical ... 29 6.3
AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical ... 29 8.3
>U42843-5|AAA83597.2| 375|Caenorhabditis elegans Beclin (human
autophagy) homologprotein 1 protein.
Length = 375
Score = 120 bits (290), Expect = 1e-27
Identities = 85/320 (26%), Positives = 132/320 (41%), Gaps = 8/320 (2%)
Query: 96 LFDLLSNNSYV-DHPLCDECTDTLLELMDNQLKQTEAEWXXXXXXXXXXXXXXXXXXXXX 154
L L+S+ + D P+C++C+D L MD Q+ + E
Sbjct: 49 LMKLISDAQFPSDAPVCNDCSDALRNEMDAQVATLDDEIKTYQTYINYLKENHPTTSIPD 108
Query: 155 XXXXXXXWKQEQSRXXXXXXXXXXXXRAMNXXXXXXXXXXXXLDKEQDVYWREYTKYRKD 214
E+ ++ ++ W++Y +
Sbjct: 109 LKAKLQNVSDEEKELEQQLKKLLAEEEQLDLDLQTKRRTAEAASEKSGELWKKYRDNLRQ 168
Query: 215 LMTTEDQMKFYECQLAYTQSQLEKLKKTNVFKATFHISDSGQFGIINNFRLGRLPTAPVD 274
+ +D++ E + Y + Q KL TNV FHI G G IN FRLG L APV+
Sbjct: 169 VFEDQDELHSLEAERQYAEVQHRKLTDTNVLDLCFHIWVDGIVGEINGFRLGYLKDAPVE 228
Query: 275 WSEINAAWGQTVLLLSSLARKINFNFQRYKLVPYGNHSYIEVLE---DQKVLPLYGSGGF 331
++EINAA GQ VLLL L +I V G+HSYI++ D + LYG G
Sbjct: 229 FTEINAALGQIVLLLEILLERIGVQHHELMPVAMGSHSYIKLRRNGIDMETYALYGQ-GT 287
Query: 332 RFLWDTKFDAAMVAFLDCLQQFKEQVEMGNTGFCLPYRIDKGKIEDTASPPHAYSIKIQF 391
+ D + FL L+ ++++ N F PY+I + D Y+ +
Sbjct: 288 PLSGSSGIDPGIRRFLQLLEFLLKELKDRNKNFKPPYQIHADSLVDNGV---KYNAVMTL 344
Query: 392 NSEEHWTKALKYMLTNLKWA 411
N++ WT+A+ MLT+LK A
Sbjct: 345 NTDVRWTRAMALMLTDLKAA 364
>Z49127-11|CAA88952.2| 452|Caenorhabditis elegans Hypothetical
protein F13D12.9 protein.
Length = 452
Score = 32.3 bits (70), Expect = 0.68
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 13/143 (9%)
Query: 282 WGQTVLLLSSLARKINFNFQRYKLV--PYGNHSYIEVLE--DQKVLPLYGSGGFRFLWDT 337
WGQ ++ + L +I FQ Y+LV Y IE++E +K LP Y F+ + D
Sbjct: 274 WGQKKVVEAGLEGRIELKFQDYRLVKEKYTRVVSIEMIEAVGEKYLPQY----FQIINDV 329
Query: 338 KFDAAMVAF--LDCLQQFKEQVEMGNTGFCLPYRIDKGKIEDTASPPHAYSIKIQFNSEE 395
D + A + C + +Q ++ F Y G + + + S+ +
Sbjct: 330 LTDGGIAALQAITCPDAYYDQYR-SSSDFIKKYIFPGGHLPSLGA--ISQSLPKTLKQTD 386
Query: 396 HWTKALKYMLTNLKWALTWISSQ 418
++ Y +T W W+ ++
Sbjct: 387 LFSMGHHYSMTLEHWFFAWMKAK 409
>AL033535-4|CAA22134.2| 452|Caenorhabditis elegans Hypothetical
protein F13D12.9 protein.
Length = 452
Score = 32.3 bits (70), Expect = 0.68
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 13/143 (9%)
Query: 282 WGQTVLLLSSLARKINFNFQRYKLV--PYGNHSYIEVLE--DQKVLPLYGSGGFRFLWDT 337
WGQ ++ + L +I FQ Y+LV Y IE++E +K LP Y F+ + D
Sbjct: 274 WGQKKVVEAGLEGRIELKFQDYRLVKEKYTRVVSIEMIEAVGEKYLPQY----FQIINDV 329
Query: 338 KFDAAMVAF--LDCLQQFKEQVEMGNTGFCLPYRIDKGKIEDTASPPHAYSIKIQFNSEE 395
D + A + C + +Q ++ F Y G + + + S+ +
Sbjct: 330 LTDGGIAALQAITCPDAYYDQYR-SSSDFIKKYIFPGGHLPSLGA--ISQSLPKTLKQTD 386
Query: 396 HWTKALKYMLTNLKWALTWISSQ 418
++ Y +T W W+ ++
Sbjct: 387 LFSMGHHYSMTLEHWFFAWMKAK 409
>AC006619-4|AAY86197.1| 309|Caenorhabditis elegans Hypothetical
protein C46C11.4 protein.
Length = 309
Score = 30.3 bits (65), Expect = 2.7
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 89 QLHVKATLFDLLSNNSYVDHPLCDEC 114
QLH+ +DL+S+ S+ DHPL EC
Sbjct: 108 QLHLHFD-YDLISDESFADHPLFREC 132
>AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform a protein.
Length = 909
Score = 29.9 bits (64), Expect = 3.6
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 29 GEHTIADLTLQIRRNNEADLDLQSSSLDHYVPPFRMSESGNGANGFMVISDGWETTSLGH 88
GE +++D L+ +R+ D L SS D PF SE GNG G+ + + G
Sbjct: 464 GELSMSDDRLKSKRSPN-DFALWKSSKDG--EPFWPSEWGNGRPGWHIECSVMSSAICGS 520
Query: 89 QLHVKATLFDL 99
+L + A FDL
Sbjct: 521 KLDIHAGGFDL 531
>AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform b protein.
Length = 908
Score = 29.9 bits (64), Expect = 3.6
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 29 GEHTIADLTLQIRRNNEADLDLQSSSLDHYVPPFRMSESGNGANGFMVISDGWETTSLGH 88
GE +++D L+ +R+ D L SS D PF SE GNG G+ + + G
Sbjct: 463 GELSMSDDRLKSKRSPN-DFALWKSSKDG--EPFWPSEWGNGRPGWHIECSVMSSAICGS 519
Query: 89 QLHVKATLFDL 99
+L + A FDL
Sbjct: 520 KLDIHAGGFDL 530
>Z98851-3|CAB11538.2| 659|Caenorhabditis elegans Hypothetical
protein H12I19.4 protein.
Length = 659
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 89 QLHVKATLFDLLSNNSYVDHPLCDECTDTLLELMDNQL 126
QLH LF + + YV P+ +E TD LE M+N +
Sbjct: 496 QLHKPDILFLISRYSDYVKGPILNEETDRTLEKMNNNI 533
>Z80219-6|CAI70409.1| 734|Caenorhabditis elegans Hypothetical
protein T01H8.1d protein.
Length = 734
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 208 YTKYRKDLMTTEDQMKFYECQLAYTQSQLEKL 239
+T+ K++M TED +KFY +L L L
Sbjct: 173 FTRLSKEVMFTEDDVKFYLAELTLALEHLHSL 204
>Z80219-4|CAB02302.2| 784|Caenorhabditis elegans Hypothetical
protein T01H8.1a protein.
Length = 784
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 208 YTKYRKDLMTTEDQMKFYECQLAYTQSQLEKL 239
+T+ K++M TED +KFY +L L L
Sbjct: 192 FTRLSKEVMFTEDDVKFYLAELTLALEHLHSL 223
>Z80219-3|CAE17938.1| 745|Caenorhabditis elegans Hypothetical
protein T01H8.1c protein.
Length = 745
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 208 YTKYRKDLMTTEDQMKFYECQLAYTQSQLEKL 239
+T+ K++M TED +KFY +L L L
Sbjct: 153 FTRLSKEVMFTEDDVKFYLAELTLALEHLHSL 184
>Z80219-1|CAB02301.2| 727|Caenorhabditis elegans Hypothetical
protein T01H8.1b protein.
Length = 727
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 208 YTKYRKDLMTTEDQMKFYECQLAYTQSQLEKL 239
+T+ K++M TED +KFY +L L L
Sbjct: 135 FTRLSKEVMFTEDDVKFYLAELTLALEHLHSL 166
>Z75546-11|CAI70402.1| 734|Caenorhabditis elegans Hypothetical
protein T01H8.1d protein.
Length = 734
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 208 YTKYRKDLMTTEDQMKFYECQLAYTQSQLEKL 239
+T+ K++M TED +KFY +L L L
Sbjct: 173 FTRLSKEVMFTEDDVKFYLAELTLALEHLHSL 204
>Z75546-10|CAA99896.2| 784|Caenorhabditis elegans Hypothetical
protein T01H8.1a protein.
Length = 784
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 208 YTKYRKDLMTTEDQMKFYECQLAYTQSQLEKL 239
+T+ K++M TED +KFY +L L L
Sbjct: 192 FTRLSKEVMFTEDDVKFYLAELTLALEHLHSL 223
>Z75546-9|CAE17895.1| 745|Caenorhabditis elegans Hypothetical
protein T01H8.1c protein.
Length = 745
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 208 YTKYRKDLMTTEDQMKFYECQLAYTQSQLEKL 239
+T+ K++M TED +KFY +L L L
Sbjct: 153 FTRLSKEVMFTEDDVKFYLAELTLALEHLHSL 184
>AL110478-1|CAB54340.2| 537|Caenorhabditis elegans Hypothetical
protein Y26D4A.2 protein.
Length = 537
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 79 DGWETTSLGHQLHVKATLFDLLSNNSYVDHPLCD-ECTDTLLEL 121
DGW+ T L +L+ + L N Y D C+ EC DT++++
Sbjct: 140 DGWKVTYLRKELNDTIVCGNFLHNRPYPDS--CETECMDTMVQV 181
>AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical
protein Y4C6B.1 protein.
Length = 442
Score = 28.7 bits (61), Expect = 8.3
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 198 DKEQDVYWREYTKYRKDLMTTEDQMKFYECQLAYTQSQLEKLKKTNV 244
D ++D T+ +TTEDQM + QLA QL L+K+ V
Sbjct: 203 DDDEDRLSMPSTRTGVTALTTEDQMAAIQNQLAMLSKQLMCLQKSGV 249
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.133 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,631,804
Number of Sequences: 27539
Number of extensions: 374566
Number of successful extensions: 862
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 847
Number of HSP's gapped (non-prelim): 19
length of query: 427
length of database: 12,573,161
effective HSP length: 83
effective length of query: 344
effective length of database: 10,287,424
effective search space: 3538873856
effective search space used: 3538873856
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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