Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000091-TA|BGIBMGA000091-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like, IPR000047|Helix-turn-helix motif,
lambda-like repressor
(368 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 53 3e-09
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 46 3e-07
AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like pr... 42 5e-06
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 39 5e-05
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 37 2e-04
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 36 5e-04
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 35 8e-04
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 35 0.001
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 34 0.002
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 33 0.002
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 33 0.002
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 33 0.002
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 33 0.002
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 33 0.004
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 33 0.004
AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 32 0.006
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 32 0.008
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 30 0.023
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 30 0.030
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 30 0.030
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 30 0.030
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 29 0.040
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 29 0.040
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 29 0.040
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 29 0.040
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 29 0.040
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 29 0.040
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 29 0.040
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 29 0.040
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 29 0.040
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 29 0.040
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 29 0.040
X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein. 29 0.053
AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein. 29 0.053
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 29 0.070
AY563109-1|AAS99587.1| 46|Tribolium castaneum aristaless protein. 29 0.070
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 28 0.093
AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax prot... 28 0.093
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 28 0.12
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 28 0.12
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 28 0.12
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 27 0.16
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 27 0.16
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 27 0.16
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 23 2.6
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 4.6
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 22 8.1
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 53.2 bits (122), Expect = 3e-09
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 289 YPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDRTP--QQPNRPEMLVPAQYAGPQGGLAQ 346
YP+ D+K+ LAQ TGLT+ QV+NWF N R+R P Q NR V + +AGP G
Sbjct: 361 YPSEDQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNR---AVFSPHAGPSG---- 413
Query: 347 ALLPNAYYHQLQDPTHYLHGTP 368
A P+ + D +H P
Sbjct: 414 AYSPDGTMGYMMDGQQMMHRPP 435
Score = 21.8 bits (44), Expect = 8.1
Identities = 16/60 (26%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 7 ENCSDRLSPPSD--VTSGSETSLPPFNYEPSQFYAQQELEKQYFSCKKTKDERKTNAIYI 64
E C P + V G S FN + + F Q EK Y+ D AI +
Sbjct: 94 EKCELATCTPREPGVAGGDVCSSESFNEDIAVFSKQIRQEKPYYIADPEVDSLMVQAIQV 153
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 46.4 bits (105), Expect = 3e-07
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 272 FKEKSRNALKDCYYR---NRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
F +++ L + +Y N YP+ + K LA+K G+T++QVSNWF N+R R
Sbjct: 237 FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIR 287
>AY600514-1|AAT11862.1| 242|Tribolium castaneum iroquois-like
protein protein.
Length = 242
Score = 42.3 bits (95), Expect = 5e-06
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 286 RNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
+N YPT EK LA T +TLTQVS WF N R+R
Sbjct: 108 KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 141
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 39.1 bits (87), Expect = 5e-05
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 272 FKEKSRNALKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDR 321
+ + R L+ +Y +RY T K LA GL+ QV WF+NRR ++R
Sbjct: 163 YTDHQRVELEKEFYYSRYITIRRKAELANSLGLSERQVKIWFQNRRAKER 212
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 37.1 bits (82), Expect = 2e-04
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 272 FKEKSRNALKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDR 321
F + L+ + R +YP + LAQ+T LT ++ WF NRR R R
Sbjct: 227 FTAHQLDELEKAFERTQYPDIYTREELAQRTKLTEARIQVWFSNRRARLR 276
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 35.9 bits (79), Expect = 5e-04
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
+ R +Y E+ LA GLT TQV WF+NRR +
Sbjct: 140 FQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 175
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 35.1 bits (77), Expect = 8e-04
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 281 KDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDR 321
K+ + ++Y T K LA+ GL+ Q+ WF+NRR ++R
Sbjct: 173 KEFTFVSKYITIKRKSELAENLGLSERQIKIWFQNRRAKER 213
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 34.7 bits (76), Expect = 0.001
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 272 FKEKSRNALKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDRTPQQPNRPEM 331
F + L+ + + RYP + +A K L ++V WFKNRR + R Q+ + +
Sbjct: 76 FTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQKQHNQQQ 135
Query: 332 LV 333
V
Sbjct: 136 SV 137
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 33.9 bits (74), Expect = 0.002
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 272 FKEKSRNALKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQ--RDRTPQQPNR 328
F + L+ + + RYP + +A K L ++V WFKNRR R + QQ N+
Sbjct: 134 FTRAQLDLLEGLFAKTRYPDIFMREEVAVKINLPESRVQVWFKNRRAKCRQQLQQQQNK 192
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 33.5 bits (73), Expect = 0.002
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 280 LKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDRTPQQPNRP 329
LK + NRY T ++ L+ + GL Q+ WF+N+R + + P
Sbjct: 243 LKHEFAENRYLTERRRQQLSAELGLNEAQIKIWFQNKRAKIKKASGTKNP 292
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 33.5 bits (73), Expect = 0.002
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 272 FKEKSRNALKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDRTPQQPNRPEM 331
F K L+ ++ N+Y T + +A L TQV WF+NRR + Q+ E
Sbjct: 260 FTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMK----QKKRMKEG 315
Query: 332 LVPAQ 336
L+P +
Sbjct: 316 LIPPE 320
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 33.5 bits (73), Expect = 0.002
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 272 FKEKSRNALKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDRTPQQPNRPEM 331
F K L+ ++ N+Y T + +A L TQV WF+NRR + Q+ E
Sbjct: 49 FTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMK----QKKRMKEG 104
Query: 332 LVPAQ 336
L+P +
Sbjct: 105 LIPPE 109
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 33.5 bits (73), Expect = 0.002
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 272 FKEKSRNALKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDRTPQQPNRPEM 331
F K L+ ++ N+Y T + +A L TQV WF+NRR + Q+ E
Sbjct: 49 FTNKQLTELEKEFHFNKYLTRARRIEIASALQLNETQVKIWFQNRRMK----QKKRMKEG 104
Query: 332 LVPAQ 336
L+P +
Sbjct: 105 LIPPE 109
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 32.7 bits (71), Expect = 0.004
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 259 PKTIWDGEETVYCFKEKSRNALKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQ 318
PK +G+ + L+ ++R++Y + +AQ LT Q+ WF+NRR
Sbjct: 79 PKGASNGKRARTAYTSSQLVELEREFHRSKYLCRPRRIQMAQNLNLTERQIKIWFQNRRM 138
Query: 319 R 319
+
Sbjct: 139 K 139
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 30 FNYEPSQFYAQQELEKQYFSCK 51
FNY+ +Q Y+ ++ FSC+
Sbjct: 213 FNYQYNQAYSNYNNYQEGFSCQ 234
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 32.7 bits (71), Expect = 0.004
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 259 PKTIWDGEETVYCFKEKSRNALKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQ 318
PK +G+ + L+ ++R++Y + +AQ LT Q+ WF+NRR
Sbjct: 99 PKGASNGKRARTAYTSSQLVELEREFHRSKYLCRPRRIQMAQNLNLTERQIKIWFQNRRM 158
Query: 319 R 319
+
Sbjct: 159 K 159
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 30 FNYEPSQFYAQQELEKQYFSCK 51
FNY+ +Q Y+ ++ FSC+
Sbjct: 233 FNYQYNQAYSNYNNYQEGFSCQ 254
>AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve cord
defective protein protein.
Length = 168
Score = 32.3 bits (70), Expect = 0.006
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 272 FKEKSRNALKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDRTPQ 324
F + L+ + + RY + E+ LA LT TQV WF+N R + + Q
Sbjct: 47 FSKAQTYELERRFRQQRYLSAPEREHLASIIRLTPTQVKIWFQNHRYKTKRAQ 99
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 31.9 bits (69), Expect = 0.008
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 287 NRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDRTPQQ 325
N Y + ++ LA+ LT QV WF+NRR +++ Q
Sbjct: 265 NAYVSKQKRWELARNLNLTERQVKIWFQNRRMKNKKNSQ 303
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 30.3 bits (65), Expect = 0.023
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 121 PTGFEDAEGNERVQFCAENENNNTRRCLNFNSEQVQCVC 159
P G+ + E V +C+ N N C+ N Q QC+C
Sbjct: 88 PYGYTGKDCGEYVDWCSTNPCENQATCVQ-NKNQYQCLC 125
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 29.9 bits (64), Expect = 0.030
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ N+Y T + +A+ LT Q+ WF+NRR +
Sbjct: 202 FHFNKYLTRRRRIEIAESLRLTERQIKIWFQNRRMK 237
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 29.9 bits (64), Expect = 0.030
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ N+Y T + +A+ LT Q+ WF+NRR +
Sbjct: 202 FHFNKYLTRRRRIEIAESLRLTERQIKIWFQNRRMK 237
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 29.9 bits (64), Expect = 0.030
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ N+Y T + +A+ LT Q+ WF+NRR +
Sbjct: 202 FHFNKYLTRRRRIEIAESLRLTERQIKIWFQNRRMK 237
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 29.5 bits (63), Expect = 0.040
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR----DRTPQQPNRPEMLVPAQYAG 339
++ NRY T + +A L+ Q+ WF+NRR + ++ P N PA
Sbjct: 252 FHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRRKTNPAGVTT 311
Query: 340 PQGGLAQALLPNA 352
G +A NA
Sbjct: 312 TTKGKVRAKTQNA 324
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 29.5 bits (63), Expect = 0.040
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ NRY T + +A LT Q+ WF+NRR +
Sbjct: 239 FHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 274
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 29.5 bits (63), Expect = 0.040
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ NRY T + +A LT Q+ WF+NRR +
Sbjct: 239 FHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 274
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 29.5 bits (63), Expect = 0.040
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ NRY T + +A LT Q+ WF+NRR +
Sbjct: 261 FHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 296
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 29.5 bits (63), Expect = 0.040
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ NRY T + +A LT Q+ WF+NRR +
Sbjct: 239 FHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 274
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 29.5 bits (63), Expect = 0.040
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ NRY T + +A LT Q+ WF+NRR +
Sbjct: 195 FHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 230
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 29.5 bits (63), Expect = 0.040
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR----DRTPQQPNRPEMLVPAQYAG 339
++ NRY T + +A L+ Q+ WF+NRR + ++ P N PA
Sbjct: 252 FHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRRKTNPAGVTT 311
Query: 340 PQGGLAQALLPNA 352
G +A NA
Sbjct: 312 TTKGKVRAKTQNA 324
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 29.5 bits (63), Expect = 0.040
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ NRY T + +A LT Q+ WF+NRR +
Sbjct: 239 FHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 274
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 29.5 bits (63), Expect = 0.040
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ NRY T + +A LT Q+ WF+NRR +
Sbjct: 27 FHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 62
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 29.5 bits (63), Expect = 0.040
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ NRY T + +A LT Q+ WF+NRR +
Sbjct: 263 FHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 298
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 29.5 bits (63), Expect = 0.040
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ NRY T + +A LT Q+ WF+NRR +
Sbjct: 239 FHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 274
>X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein.
Length = 251
Score = 29.1 bits (62), Expect = 0.053
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDRTPQQPN-RPEMLVPAQYAGPQG 342
++ +Y + + +A+ L+ Q+ WF+NRR + + Q PA+ A
Sbjct: 107 FHHGKYLSRPRRIQIAENLNLSERQIKIWFQNRRMKHKKEQMNKVSTPRSSPAETASSLS 166
Query: 343 GLAQALLPNAYYHQLQD 359
+ A ++ HQ+ D
Sbjct: 167 PQSVASTASSADHQIVD 183
>AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein.
Length = 246
Score = 29.1 bits (62), Expect = 0.053
Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDRTPQQPN-RPEMLVPAQYAGPQG 342
++ +Y + + +A+ L+ Q+ WF+NRR + + Q PA+ A
Sbjct: 98 FHHGKYLSRPRRIQIAENLNLSERQIKIWFQNRRMKHKKEQMNKVSTPRSSPAETASSLS 157
Query: 343 GLAQALLPNAYYHQLQD 359
+ A ++ HQ+ D
Sbjct: 158 PQSVASTASSADHQIVD 174
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 28.7 bits (61), Expect = 0.070
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 272 FKEKSRNALKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDR 321
F + L+ +++ Y + + LA + L + + WF+NRR +D+
Sbjct: 78 FTREQLARLEKEFFKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDK 127
>AY563109-1|AAS99587.1| 46|Tribolium castaneum aristaless protein.
Length = 46
Score = 28.7 bits (61), Expect = 0.070
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 280 LKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFK 314
L+ + R YP + LA K GLT ++ WF+
Sbjct: 12 LEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQ 46
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 28.3 bits (60), Expect = 0.093
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ N Y T + +A LT Q+ WF+NRR +
Sbjct: 242 FHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMK 277
>AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax
protein.
Length = 96
Score = 28.3 bits (60), Expect = 0.093
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ N Y T + +A LT Q+ WF+NRR +
Sbjct: 24 FHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMK 59
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 27.9 bits (59), Expect = 0.12
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 279 ALKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDRTPQQPNRPEMLVPAQ 336
AL+ + +Y + E+ + LT QV WF+NRR + + Q+ ++ + A+
Sbjct: 129 ALEKKFRDKQYLSIAERAEFSSSLRLTEPQVKIWFQNRRAKAKRLQEAELEKLRLSAR 186
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 27.9 bits (59), Expect = 0.12
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDR 321
++ N+Y + +A LT QV WF+NRR + +
Sbjct: 23 FHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHK 60
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 27.9 bits (59), Expect = 0.12
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDR 321
++ N+Y + +A LT QV WF+NRR + +
Sbjct: 154 FHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHK 191
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 27.5 bits (58), Expect = 0.16
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ N Y T + +A LT Q+ WF+NRR +
Sbjct: 25 FHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 60
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 27.5 bits (58), Expect = 0.16
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ N Y T + +A LT Q+ WF+NRR +
Sbjct: 176 FHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 211
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 27.5 bits (58), Expect = 0.16
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ N Y T + +A LT Q+ WF+NRR +
Sbjct: 235 FHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 270
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 23.4 bits (48), Expect = 2.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKN 315
++ NRY T + +A L+ Q+ WF+N
Sbjct: 252 FHYNRYLTRRRRIEIAHTLVLSERQIKIWFQN 283
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 17 SDVTSGSETSLPPFNYEPSQFYAQQE 42
+D +G + ++PP + EP A +E
Sbjct: 1765 ADAGTGQQETIPPIDEEPPSVEAVEE 1790
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 21.8 bits (44), Expect = 8.1
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 287 NRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDRTPQQP 326
N Y + + +A L+ QV WF+NRR + + P
Sbjct: 139 NMYLSRLRRIEIATCLRLSEKQVKIWFQNRRVKYKKEDLP 178
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.316 0.132 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,247
Number of Sequences: 317
Number of extensions: 4279
Number of successful extensions: 53
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 52
length of query: 368
length of database: 114,650
effective HSP length: 58
effective length of query: 310
effective length of database: 96,264
effective search space: 29841840
effective search space used: 29841840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)
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