Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000091-TA|BGIBMGA000091-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like, IPR000047|Helix-turn-helix motif,
lambda-like repressor
(368 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 36 7e-04
AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein. 35 0.001
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 33 0.004
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 33 0.004
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 31 0.021
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 30 0.036
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 30 0.036
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 29 0.048
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 28 0.15
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 25 0.78
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 24 2.4
AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin prot... 24 2.4
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 4.2
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 7.3
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 7.3
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 7.3
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 7.3
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 9.6
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 9.6
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 9.6
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 9.6
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 9.6
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 9.6
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 9.6
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 9.6
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 9.6
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 35.5 bits (78), Expect = 7e-04
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 272 FKEKSRNALKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDRTPQQPNRP 329
F + LK + NRY T ++ L++ GLT Q+ WF+N+R + + P
Sbjct: 27 FSAEQLARLKREFAENRYLTERRRQQLSRDLGLTEAQIKIWFQNKRAKIKKASGQKNP 84
>AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein.
Length = 43
Score = 35.1 bits (77), Expect = 0.001
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 286 RNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
R +Y E+ LA GLT TQV WF+NRR +
Sbjct: 2 RTQYLALPERAELAASLGLTQTQVKIWFQNRRSK 35
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 33.1 bits (72), Expect = 0.004
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 279 ALKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
AL++ + RY + E+ LA LT TQV WF+NRR +
Sbjct: 22 ALENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTK 62
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 33.1 bits (72), Expect = 0.004
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 280 LKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDRTPQQPNRP 329
LK + NRY T ++ L++ GL Q+ WF+N+R + + P
Sbjct: 35 LKREFAENRYLTERRRQQLSRDLGLNEAQIKIWFQNKRAKIKKASGQKNP 84
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 30.7 bits (66), Expect = 0.021
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 279 ALKDCYYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQRDRTPQQ 325
+L+ + +Y T E+ + LT TQV WF+NRR + + Q+
Sbjct: 23 SLEKKFREKQYLTIAERAEFSSSLHLTETQVKIWFQNRRAKAKRLQE 69
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 29.9 bits (64), Expect = 0.036
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ NRY T + +A LT Q+ WF+NRR +
Sbjct: 27 FHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 62
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 29.9 bits (64), Expect = 0.036
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ NRY T + +A LT Q+ WF+NRR +
Sbjct: 289 FHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 324
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 29.5 bits (63), Expect = 0.048
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ NRY T + +A LT Q+ WF+NRR +
Sbjct: 27 FHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 62
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 27.9 bits (59), Expect = 0.15
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 284 YYRNRYPTPDEKRALAQKTGLTLTQVSNWFKNRRQR 319
++ N Y T + +A LT Q+ WF+NRR +
Sbjct: 27 FHYNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 62
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 25.4 bits (53), Expect = 0.78
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Query: 234 KEAEKVRGRALGAVDKYRLRKKYPLPKTIWDGEETVYCFKEKSRNA-LKDCYYRNRYPTP 292
+EAE + D R K P K G T + EK+R A L++C + + P
Sbjct: 18 REAEHGYASTMPMPDDMRTVTKRPKTKKS-QGSRTTHNELEKNRRAHLRNCLEKLKVLVP 76
Query: 293 DEKRALAQKTGLTLTQVSNWFKNRRQRDR 321
T LT+ + K+ +R+R
Sbjct: 77 LGPETSRHTTLGLLTKAKRFIKSLEERER 105
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 23.8 bits (49), Expect = 2.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 59 TNAIYIDGKSYESQQRNKR 77
T A+ IDG++YE + R K+
Sbjct: 65 TIAVQIDGQTYEGKGRTKK 83
>AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin
protein.
Length = 124
Score = 23.8 bits (49), Expect = 2.4
Identities = 8/31 (25%), Positives = 18/31 (58%)
Query: 111 NESALVELKGPTGFEDAEGNERVQFCAENEN 141
+++ L + + PTG ++ +G E+ +EN
Sbjct: 21 SDNVLFDKRAPTGHQEMQGKEKNSASLNSEN 51
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.0 bits (47), Expect = 4.2
Identities = 10/41 (24%), Positives = 24/41 (58%)
Query: 38 YAQQELEKQYFSCKKTKDERKTNAIYIDGKSYESQQRNKRY 78
Y + EK+ F ++T +R + + + KSY++++ ++Y
Sbjct: 252 YEKLHNEKEKFLEERTSHKRYSRSREREQKSYKNEREYRKY 292
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 7.3
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 44 EKQYFSCKKTKDERKTNAIYIDGKSYESQQRNKRY 78
EK+ F +KT +R + + + KSY++++ + Y
Sbjct: 25 EKEKFLEEKTSRKRYSRSREREQKSYKNEREYREY 59
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 7.3
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 44 EKQYFSCKKTKDERKTNAIYIDGKSYESQQRNKRY 78
EK+ F +KT +R + + + KSY++++ + Y
Sbjct: 25 EKEKFLEEKTSRKRYSRSREREQKSYKNEREYREY 59
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 7.3
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 44 EKQYFSCKKTKDERKTNAIYIDGKSYESQQRNKRY 78
EK+ F +KT +R + + + KSY++++ + Y
Sbjct: 25 EKEKFLEEKTSRKRYSRSREREQKSYKNEREYREY 59
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 7.3
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 44 EKQYFSCKKTKDERKTNAIYIDGKSYESQQRNKRY 78
EK+ F +KT +R + + + KSY++++ + Y
Sbjct: 25 EKEKFLEEKTSRKRYSRSREREQKSYKNEREYREY 59
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 9.6
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 38 YAQQELEKQYFSCKKTKDERKTNAIYIDGKSYESQQRNKRY 78
Y + EK+ F ++T +R + + + KSY+++ ++Y
Sbjct: 19 YEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKY 59
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 9.6
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 38 YAQQELEKQYFSCKKTKDERKTNAIYIDGKSYESQQRNKRY 78
Y + EK+ F ++T +R + + + KSY+++ ++Y
Sbjct: 19 YEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKY 59
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 9.6
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 38 YAQQELEKQYFSCKKTKDERKTNAIYIDGKSYESQQRNKRY 78
Y + EK+ F ++T +R + + + KSY+++ ++Y
Sbjct: 19 YEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKY 59
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 9.6
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 38 YAQQELEKQYFSCKKTKDERKTNAIYIDGKSYESQQRNKRY 78
Y + EK+ F ++T +R + + + KSY+++ ++Y
Sbjct: 19 YEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKY 59
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 9.6
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 38 YAQQELEKQYFSCKKTKDERKTNAIYIDGKSYESQQRNKRY 78
Y + EK+ F ++T +R + + + KSY+++ ++Y
Sbjct: 19 YEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKY 59
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 9.6
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 38 YAQQELEKQYFSCKKTKDERKTNAIYIDGKSYESQQRNKRY 78
Y + EK+ F ++T +R + + + KSY+++ ++Y
Sbjct: 19 YEKLHNEKEKFLEERTSRKRYSRSREREQKSYKNENSYRKY 59
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 9.6
Identities = 10/46 (21%), Positives = 26/46 (56%)
Query: 33 EPSQFYAQQELEKQYFSCKKTKDERKTNAIYIDGKSYESQQRNKRY 78
E + Y + EK+ ++T +R + + + KSY+++++ ++Y
Sbjct: 14 EKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQKSYKNERKYRKY 59
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 9.6
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 278 NALKDCYYRNRYPTPDEKRALAQKTGLTLTQV 309
N L D Y P +E L GLTL Q+
Sbjct: 29 NDLLDTYNVLERPVGNESEPLVLSFGLTLMQI 60
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 9.6
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 38 YAQQELEKQYFSCKKTKDERKTNAIYIDGKSYESQQRNKRY 78
Y + EK+ ++T ER + + + KSY++++ ++Y
Sbjct: 252 YEKLHNEKEKLLEERTSRERYSRSREREQKSYKNEREYRKY 292
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.316 0.132 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,651
Number of Sequences: 429
Number of extensions: 6652
Number of successful extensions: 39
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 27
length of query: 368
length of database: 140,377
effective HSP length: 59
effective length of query: 309
effective length of database: 115,066
effective search space: 35555394
effective search space used: 35555394
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)
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