Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000090-TA|BGIBMGA000090-PA|IPR002000|Lysosome-associated
membrane glycoprotein (Lamp)/CD68
(275 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT009923-1|AAP88925.1| 354|Homo sapiens CD68 antigen protein. 41 0.005
BC015557-1|AAH15557.1| 354|Homo sapiens CD68 molecule protein. 41 0.005
AK222514-1|BAD96234.1| 354|Homo sapiens CD68 antigen variant pr... 41 0.005
AK222492-1|BAD96212.1| 354|Homo sapiens CD68 antigen variant pr... 41 0.005
S57235-1|AAB25811.1| 354|Homo sapiens CD68 protein. 40 0.007
BC050727-1|AAH50727.1| 280|Homo sapiens chromosome 20 open read... 40 0.009
AL121740-1|CAB57330.1| 280|Homo sapiens hypothetical protein pr... 40 0.009
AL031652-5|CAC18101.1| 280|Homo sapiens chromosome 20 open read... 40 0.009
J04182-1|AAA60382.1| 416|Homo sapiens lysosomal membrane glycop... 31 3.3
BC093044-1|AAH93044.1| 417|Homo sapiens lysosomal-associated me... 31 3.3
BC021288-1|AAH21288.1| 417|Homo sapiens lysosomal-associated me... 31 3.3
AL136221-7|CAI13797.1| 417|Homo sapiens lysosomal-associated me... 31 3.3
AB209319-1|BAD92556.1| 392|Homo sapiens LAMP1 protein variant p... 31 3.3
AY003851-1|AAK11818.1| 111|Homo sapiens immunoglobulin heavy ch... 31 4.4
AF020351-1|AAB87865.1| 175|Homo sapiens NADH:ubiquinone oxidore... 31 4.4
BC113664-1|AAI13665.1| 1338|Homo sapiens centromere protein J pr... 30 7.6
BC113662-1|AAI13663.1| 1338|Homo sapiens centromere protein J pr... 30 7.6
BC113110-1|AAI13111.1| 1338|Homo sapiens centromere protein J pr... 30 7.6
BC024209-1|AAH24209.3| 372|Homo sapiens CENPJ protein protein. 30 7.6
AL354798-4|CAI16635.1| 1338|Homo sapiens centromere protein J pr... 30 7.6
AJ303006-1|CAC80028.1| 372|Homo sapiens LAG-3-associated protei... 30 7.6
AF139625-1|AAG21074.1| 1338|Homo sapiens centrosomal P4.1-associ... 30 7.6
>BT009923-1|AAP88925.1| 354|Homo sapiens CD68 antigen protein.
Length = 354
Score = 40.7 bits (91), Expect = 0.005
Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 19/168 (11%)
Query: 62 GGETCILLTVDALLDISYVTKLNERA-DANTFVPNNANVGGACKDGDAETLVLSFKDFTL 120
G + C+ L + + Y T+ A + PN V G+C +G L+LSF L
Sbjct: 165 GSQPCVHLQAQIQIRVMYTTQGGGEAWGISVLNPNKTKVQGSC-EGAHPHLLLSFPYGHL 223
Query: 121 EWFFAKTPGGERWYAESMKLSYNSSSRILEHAANQGRRVTLTTDSRELLFPTPVGKSYFC 180
+ F + + Y M + YN S HAA Q R+L P+G+S+ C
Sbjct: 224 SFGFMQDLQQKVVYLSYMAVEYNVS---FPHAA-QWTFSAQNASLRDL--QAPLGQSFSC 277
Query: 181 PDETVIELTEEDPSNPTLAHKAKLYLRQMRLQPFMFKRSGEFGPAWHC 228
+ ++I L+ L L +RLQ +G FG ++ C
Sbjct: 278 SNSSII-----------LSPAVHLDLLSLRLQAAQLPHTGVFGQSFSC 314
>BC015557-1|AAH15557.1| 354|Homo sapiens CD68 molecule protein.
Length = 354
Score = 40.7 bits (91), Expect = 0.005
Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 19/168 (11%)
Query: 62 GGETCILLTVDALLDISYVTKLNERA-DANTFVPNNANVGGACKDGDAETLVLSFKDFTL 120
G + C+ L + + Y T+ A + PN V G+C +G L+LSF L
Sbjct: 165 GSQPCVHLQAQIQIRVMYTTQGGGEAWGISVLNPNKTKVQGSC-EGAHPHLLLSFPYGHL 223
Query: 121 EWFFAKTPGGERWYAESMKLSYNSSSRILEHAANQGRRVTLTTDSRELLFPTPVGKSYFC 180
+ F + + Y M + YN S HAA Q R+L P+G+S+ C
Sbjct: 224 SFGFMQDLQQKVVYLSYMAVEYNVS---FPHAA-QWTFSAQNASLRDL--QAPLGQSFSC 277
Query: 181 PDETVIELTEEDPSNPTLAHKAKLYLRQMRLQPFMFKRSGEFGPAWHC 228
+ ++I L+ L L +RLQ +G FG ++ C
Sbjct: 278 SNSSII-----------LSPAVHLDLLSLRLQAAQLPHTGVFGQSFSC 314
>AK222514-1|BAD96234.1| 354|Homo sapiens CD68 antigen variant
protein.
Length = 354
Score = 40.7 bits (91), Expect = 0.005
Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 19/168 (11%)
Query: 62 GGETCILLTVDALLDISYVTKLNERA-DANTFVPNNANVGGACKDGDAETLVLSFKDFTL 120
G + C+ L + + Y T+ A + PN V G+C +G L+LSF L
Sbjct: 165 GSQPCVHLQAQIQIRVMYTTQGGGEAWGISVLNPNKTKVQGSC-EGAHPHLLLSFPYGHL 223
Query: 121 EWFFAKTPGGERWYAESMKLSYNSSSRILEHAANQGRRVTLTTDSRELLFPTPVGKSYFC 180
+ F + + Y M + YN S HAA Q R+L P+G+S+ C
Sbjct: 224 SFGFMQDLQQKVVYLSYMAVEYNVS---FPHAA-QWTFSAQNASLRDL--QAPLGQSFSC 277
Query: 181 PDETVIELTEEDPSNPTLAHKAKLYLRQMRLQPFMFKRSGEFGPAWHC 228
+ ++I L+ L L +RLQ +G FG ++ C
Sbjct: 278 SNSSII-----------LSPAVHLDLLSLRLQAAQLPHTGVFGQSFSC 314
>AK222492-1|BAD96212.1| 354|Homo sapiens CD68 antigen variant
protein.
Length = 354
Score = 40.7 bits (91), Expect = 0.005
Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 19/168 (11%)
Query: 62 GGETCILLTVDALLDISYVTKLNERA-DANTFVPNNANVGGACKDGDAETLVLSFKDFTL 120
G + C+ L + + Y T+ A + PN V G+C +G L+LSF L
Sbjct: 165 GSQPCVHLQAQIQIRVMYTTQGGGEAWGISVLNPNKTKVQGSC-EGAHPHLLLSFPYGHL 223
Query: 121 EWFFAKTPGGERWYAESMKLSYNSSSRILEHAANQGRRVTLTTDSRELLFPTPVGKSYFC 180
+ F + + Y M + YN S HAA Q R+L P+G+S+ C
Sbjct: 224 SFGFMQDLQQKVVYLSYMAVEYNVS---FPHAA-QWTFSAQNASLRDL--QAPLGQSFSC 277
Query: 181 PDETVIELTEEDPSNPTLAHKAKLYLRQMRLQPFMFKRSGEFGPAWHC 228
+ ++I L+ L L +RLQ +G FG ++ C
Sbjct: 278 SNSSII-----------LSPAVHLDLLSLRLQAAQLPHTGVFGQSFSC 314
>S57235-1|AAB25811.1| 354|Homo sapiens CD68 protein.
Length = 354
Score = 40.3 bits (90), Expect = 0.007
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 21/169 (12%)
Query: 62 GGETCILLTVDALLDISYVTKLNERA-DANTFVPNNANVGGACKDGDAETLVLSFKDFTL 120
G + C+ L + + Y T+ A + PN V G+C +G L+LSF L
Sbjct: 165 GSQPCVHLQAQIQIRVMYTTQGGGEAWGISVLNPNKTKVQGSC-EGAHPHLLLSFPYGHL 223
Query: 121 EWFFAKTPGGERWYAESMKLSYNSSSRILEHAANQGRRVTLTTDSRELL-FPTPVGKSYF 179
+ F + + Y M + YN S HAA + T + + L P+G+S+
Sbjct: 224 SFGFMQDLQQKVVYLSYMAVEYNVS---FPHAA----KWTFSAQNASLRDLQAPLGQSFS 276
Query: 180 CPDETVIELTEEDPSNPTLAHKAKLYLRQMRLQPFMFKRSGEFGPAWHC 228
C + ++I L+ L L +RLQ +G FG ++ C
Sbjct: 277 CSNSSII-----------LSPAVHLDLLSLRLQAAQLPHTGVFGQSFSC 314
>BC050727-1|AAH50727.1| 280|Homo sapiens chromosome 20 open reading
frame 103 protein.
Length = 280
Score = 39.9 bits (89), Expect = 0.009
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 19/146 (13%)
Query: 78 SYVTKLNERADANTFVPNNANVGGACKDGDAETLVLSF-KDFTLEWFFAK-----TPGGE 131
+YV + E+AD + A V G C +E V + + L+ F K + G E
Sbjct: 76 NYVDLITEQADIA--LTRGAEVKGRCGHSQSELQVFWVDRAYALKMLFVKESHNMSKGPE 133
Query: 132 R-WYAESMKLSYNSSSRI-LEHAANQGRRVTLTTDSREL-LFPTPVGKSYFCPDETVIEL 188
W ++ Y+SS + + A + G+ T +S L TP GKSY C + I L
Sbjct: 134 ATWRLSKVQFVYDSSEKTHFKDAVSAGKH---TANSHHLSALVTPAGKSYECQAQQTISL 190
Query: 189 TEEDPSNPTLAHKAKLYLRQMRLQPF 214
DP + L + +QPF
Sbjct: 191 ASSDPQK-----TVTMILSAVHIQPF 211
>AL121740-1|CAB57330.1| 280|Homo sapiens hypothetical protein
protein.
Length = 280
Score = 39.9 bits (89), Expect = 0.009
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 19/146 (13%)
Query: 78 SYVTKLNERADANTFVPNNANVGGACKDGDAETLVLSF-KDFTLEWFFAK-----TPGGE 131
+YV + E+AD + A V G C +E V + + L+ F K + G E
Sbjct: 76 NYVDLITEQADIA--LTRGAEVKGRCGHSQSELQVFWVDRAYALKMLFVKESHNMSKGPE 133
Query: 132 R-WYAESMKLSYNSSSRI-LEHAANQGRRVTLTTDSREL-LFPTPVGKSYFCPDETVIEL 188
W ++ Y+SS + + A + G+ T +S L TP GKSY C + I L
Sbjct: 134 ATWRLSKVQFVYDSSEKTHFKDAVSAGKH---TANSHHLSALVTPAGKSYECQAQQTISL 190
Query: 189 TEEDPSNPTLAHKAKLYLRQMRLQPF 214
DP + L + +QPF
Sbjct: 191 ASSDPQK-----TVTMILSAVHIQPF 211
>AL031652-5|CAC18101.1| 280|Homo sapiens chromosome 20 open reading
frame 103 protein.
Length = 280
Score = 39.9 bits (89), Expect = 0.009
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 19/146 (13%)
Query: 78 SYVTKLNERADANTFVPNNANVGGACKDGDAETLVLSF-KDFTLEWFFAK-----TPGGE 131
+YV + E+AD + A V G C +E V + + L+ F K + G E
Sbjct: 76 NYVDLITEQADIA--LTRGAEVKGRCGHSQSELQVFWVDRAYALKMLFVKESHNMSKGPE 133
Query: 132 R-WYAESMKLSYNSSSRI-LEHAANQGRRVTLTTDSREL-LFPTPVGKSYFCPDETVIEL 188
W ++ Y+SS + + A + G+ T +S L TP GKSY C + I L
Sbjct: 134 ATWRLSKVQFVYDSSEKTHFKDAVSAGKH---TANSHHLSALVTPAGKSYECQAQQTISL 190
Query: 189 TEEDPSNPTLAHKAKLYLRQMRLQPF 214
DP + L + +QPF
Sbjct: 191 ASSDPQK-----TVTMILSAVHIQPF 211
>J04182-1|AAA60382.1| 416|Homo sapiens lysosomal membrane
glycoprotein-1 protein.
Length = 416
Score = 31.5 bits (68), Expect = 3.3
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 16/143 (11%)
Query: 54 ATYRLQGGGGETCILLTVDALLDISYVTKLNERADANTFVPNNANV---GGAC-KDGDAE 109
A + ++ G G CI+ A ++Y TK + + +P++A V +C K+ ++
Sbjct: 28 AMFMVKNGNGTACIMANFSAAFSVNYDTKSGPK-NMTFDLPSDATVVLNRSSCGKENTSD 86
Query: 110 -TLVLSF-KDFTLEWFFAKTPGGERWYAESMKLSYN-SSSRILEHAANQG-RRVTLTTDS 165
+LV++F + TL F T R+ + M YN S + + +A+++ + V TD
Sbjct: 87 PSLVIAFGRGHTLTLNF--TRNATRYSVQLMSFVYNLSDTHLFPNASSKEIKTVESITDI 144
Query: 166 RELLFPTPVGKSYFCPDETVIEL 188
R + K Y C T + +
Sbjct: 145 R-----ADIDKKYRCVSGTQVHM 162
>BC093044-1|AAH93044.1| 417|Homo sapiens lysosomal-associated
membrane protein 1 protein.
Length = 417
Score = 31.5 bits (68), Expect = 3.3
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 16/143 (11%)
Query: 54 ATYRLQGGGGETCILLTVDALLDISYVTKLNERADANTFVPNNANV---GGAC-KDGDAE 109
A + ++ G G CI+ A ++Y TK + + +P++A V +C K+ ++
Sbjct: 29 AMFMVKNGNGTACIMANFSAAFSVNYDTKSGPK-NMTFDLPSDATVVLNRSSCGKENTSD 87
Query: 110 -TLVLSF-KDFTLEWFFAKTPGGERWYAESMKLSYN-SSSRILEHAANQG-RRVTLTTDS 165
+LV++F + TL F T R+ + M YN S + + +A+++ + V TD
Sbjct: 88 PSLVIAFGRGHTLTLNF--TRNATRYSVQLMSFVYNLSDTHLFPNASSKEIKTVESITDI 145
Query: 166 RELLFPTPVGKSYFCPDETVIEL 188
R + K Y C T + +
Sbjct: 146 R-----ADIDKKYRCVSGTQVHM 163
>BC021288-1|AAH21288.1| 417|Homo sapiens lysosomal-associated
membrane protein 1 protein.
Length = 417
Score = 31.5 bits (68), Expect = 3.3
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 16/143 (11%)
Query: 54 ATYRLQGGGGETCILLTVDALLDISYVTKLNERADANTFVPNNANV---GGAC-KDGDAE 109
A + ++ G G CI+ A ++Y TK + + +P++A V +C K+ ++
Sbjct: 29 AMFMVKNGNGTACIMANFSAAFSVNYDTKSGPK-NMTFDLPSDATVVLNRSSCGKENTSD 87
Query: 110 -TLVLSF-KDFTLEWFFAKTPGGERWYAESMKLSYN-SSSRILEHAANQG-RRVTLTTDS 165
+LV++F + TL F T R+ + M YN S + + +A+++ + V TD
Sbjct: 88 PSLVIAFGRGHTLTLNF--TRNATRYSVQLMSFVYNLSDTHLFPNASSKEIKTVESITDI 145
Query: 166 RELLFPTPVGKSYFCPDETVIEL 188
R + K Y C T + +
Sbjct: 146 R-----ADIDKKYRCVSGTQVHM 163
>AL136221-7|CAI13797.1| 417|Homo sapiens lysosomal-associated
membrane protein 1 protein.
Length = 417
Score = 31.5 bits (68), Expect = 3.3
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 16/143 (11%)
Query: 54 ATYRLQGGGGETCILLTVDALLDISYVTKLNERADANTFVPNNANV---GGAC-KDGDAE 109
A + ++ G G CI+ A ++Y TK + + +P++A V +C K+ ++
Sbjct: 29 AMFMVKNGNGTACIMANFSAAFSVNYDTKSGPK-NMTFDLPSDATVVLNRSSCGKENTSD 87
Query: 110 -TLVLSF-KDFTLEWFFAKTPGGERWYAESMKLSYN-SSSRILEHAANQG-RRVTLTTDS 165
+LV++F + TL F T R+ + M YN S + + +A+++ + V TD
Sbjct: 88 PSLVIAFGRGHTLTLNF--TRNATRYSVQLMSFVYNLSDTHLFPNASSKEIKTVESITDI 145
Query: 166 RELLFPTPVGKSYFCPDETVIEL 188
R + K Y C T + +
Sbjct: 146 R-----ADIDKKYRCVSGTQVHM 163
>AB209319-1|BAD92556.1| 392|Homo sapiens LAMP1 protein variant
protein.
Length = 392
Score = 31.5 bits (68), Expect = 3.3
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 16/143 (11%)
Query: 54 ATYRLQGGGGETCILLTVDALLDISYVTKLNERADANTFVPNNANV---GGAC-KDGDAE 109
A + ++ G G CI+ A ++Y TK + + +P++A V +C K+ ++
Sbjct: 18 AMFMVKNGNGTACIMANFSAAFSVNYDTKSGPK-NMTFDLPSDATVVLNRSSCGKENTSD 76
Query: 110 -TLVLSF-KDFTLEWFFAKTPGGERWYAESMKLSYN-SSSRILEHAANQG-RRVTLTTDS 165
+LV++F + TL F T R+ + M YN S + + +A+++ + V TD
Sbjct: 77 PSLVIAFGRGHTLTLNF--TRNATRYSVQLMSFVYNLSDTHLFPNASSKEIKTVESITDI 134
Query: 166 RELLFPTPVGKSYFCPDETVIEL 188
R + K Y C T + +
Sbjct: 135 R-----ADIDKKYRCVSGTQVHM 152
>AY003851-1|AAK11818.1| 111|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 111
Score = 31.1 bits (67), Expect = 4.4
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 120 LEWFFAKTPGGERWYAESMK----LSYNSSSRILEHAANQGRR--VTLTTDSRELLFPTP 173
LEW GG +YA+S+K +S ++S L N R + +RE P
Sbjct: 22 LEWVSVIYSGGNTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAREQEVPPR 81
Query: 174 VGKSYFCPDETVIELTEEDPSNPTL 198
G SY+ T++ ++ S PTL
Sbjct: 82 RGASYYWGQGTLVTVSSGSASAPTL 106
>AF020351-1|AAB87865.1| 175|Homo sapiens NADH:ubiquinone
oxidoreductase 18 kDa IP subunit protein.
Length = 175
Score = 31.1 bits (67), Expect = 4.4
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 28 RVTKYSKTTIAPGG-STESVTERSLVTATYRLQGGGGETCILLTVDALLDISYVTKLNE 85
R T + + +A S V RSL T+T+RL + L+TVD LDI+ +T + E
Sbjct: 11 RQTLWRRRAVAVAALSVSRVPTRSLRTSTWRLAQDQTQDTQLITVDEKLDITTLTGVPE 69
>BC113664-1|AAI13665.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 30.3 bits (65), Expect = 7.6
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 122 WFFAKTPGGERWYAESMKLSYNSSSRILEHAANQGRRVTLTTDSRELLFPTPVGKSYFCP 181
+++A Y E +++ + SS +I +H + + +T + + LFP +S F P
Sbjct: 1208 YYYAAAQTTHTTYPEGLEVLHFSSGQIEKHYPDGRKEITFPDQTVKNLFPDGQEESIF-P 1266
Query: 182 DETVIELTEE 191
D T++ + +
Sbjct: 1267 DGTIVRVQRD 1276
>BC113662-1|AAI13663.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 30.3 bits (65), Expect = 7.6
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 122 WFFAKTPGGERWYAESMKLSYNSSSRILEHAANQGRRVTLTTDSRELLFPTPVGKSYFCP 181
+++A Y E +++ + SS +I +H + + +T + + LFP +S F P
Sbjct: 1208 YYYAAAQTTHTTYPEGLEVLHFSSGQIEKHYPDGRKEITFPDQTVKNLFPDGQEESIF-P 1266
Query: 182 DETVIELTEE 191
D T++ + +
Sbjct: 1267 DGTIVRVQRD 1276
>BC113110-1|AAI13111.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 30.3 bits (65), Expect = 7.6
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 122 WFFAKTPGGERWYAESMKLSYNSSSRILEHAANQGRRVTLTTDSRELLFPTPVGKSYFCP 181
+++A Y E +++ + SS +I +H + + +T + + LFP +S F P
Sbjct: 1208 YYYAAAQTTHTTYPEGLEVLHFSSGQIEKHYPDGRKEITFPDQTVKNLFPDGQEESIF-P 1266
Query: 182 DETVIELTEE 191
D T++ + +
Sbjct: 1267 DGTIVRVQRD 1276
>BC024209-1|AAH24209.3| 372|Homo sapiens CENPJ protein protein.
Length = 372
Score = 30.3 bits (65), Expect = 7.6
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 122 WFFAKTPGGERWYAESMKLSYNSSSRILEHAANQGRRVTLTTDSRELLFPTPVGKSYFCP 181
+++A Y E +++ + SS +I +H + + +T + + LFP +S F P
Sbjct: 242 YYYAAAQTTHTTYPEGLEVLHFSSGQIEKHYPDGRKEITFPDQTVKNLFPDGQEESIF-P 300
Query: 182 DETVIELTEE 191
D T++ + +
Sbjct: 301 DGTIVRVQRD 310
>AL354798-4|CAI16635.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 30.3 bits (65), Expect = 7.6
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 122 WFFAKTPGGERWYAESMKLSYNSSSRILEHAANQGRRVTLTTDSRELLFPTPVGKSYFCP 181
+++A Y E +++ + SS +I +H + + +T + + LFP +S F P
Sbjct: 1208 YYYAAAQTTHTTYPEGLEVLHFSSGQIEKHYPDGRKEITFPDQTVKNLFPDGQEESIF-P 1266
Query: 182 DETVIELTEE 191
D T++ + +
Sbjct: 1267 DGTIVRVQRD 1276
>AJ303006-1|CAC80028.1| 372|Homo sapiens LAG-3-associated protein
protein.
Length = 372
Score = 30.3 bits (65), Expect = 7.6
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 122 WFFAKTPGGERWYAESMKLSYNSSSRILEHAANQGRRVTLTTDSRELLFPTPVGKSYFCP 181
+++A Y E +++ + SS +I +H + + +T + + LFP +S F P
Sbjct: 242 YYYAAAQTTHTTYPEGLEVLHFSSGQIEKHYPDGRKEITFPDQTVKNLFPDGQEESIF-P 300
Query: 182 DETVIELTEE 191
D T++ + +
Sbjct: 301 DGTIVRVQRD 310
>AF139625-1|AAG21074.1| 1338|Homo sapiens centrosomal P4.1-associated
protein protein.
Length = 1338
Score = 30.3 bits (65), Expect = 7.6
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 122 WFFAKTPGGERWYAESMKLSYNSSSRILEHAANQGRRVTLTTDSRELLFPTPVGKSYFCP 181
+++A Y E +++ + SS +I +H + + +T + + LFP +S F P
Sbjct: 1208 YYYAAAQTTHTTYPEGLEVLHFSSGQIEKHYPDGRKEITFPDQTVKNLFPDGQEESIF-P 1266
Query: 182 DETVIELTEE 191
D T++ + +
Sbjct: 1267 DGTIVRVQRD 1276
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.132 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,198,286
Number of Sequences: 224733
Number of extensions: 1426883
Number of successful extensions: 2807
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 2805
Number of HSP's gapped (non-prelim): 22
length of query: 275
length of database: 73,234,838
effective HSP length: 89
effective length of query: 186
effective length of database: 53,233,601
effective search space: 9901449786
effective search space used: 9901449786
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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