Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000089-TA|BGIBMGA000089-PA|undefined
(611 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 39 0.012
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 39 0.012
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 33 0.78
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 33 0.78
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 33 0.78
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 33 0.78
AF000195-7|AAC24270.1| 676|Caenorhabditis elegans Oxysterol bin... 33 0.78
Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical pr... 31 1.8
U28409-4|AAC46590.2| 394|Caenorhabditis elegans Saposin-like pr... 31 1.8
U21309-5|AAT92085.1| 536|Caenorhabditis elegans Hypothetical pr... 31 2.4
U21309-4|AAN73883.1| 546|Caenorhabditis elegans Hypothetical pr... 31 2.4
AY314778-1|AAQ84885.1| 546|Caenorhabditis elegans calcitonin re... 31 2.4
AY314776-1|AAQ84883.1| 536|Caenorhabditis elegans calcitonin re... 31 2.4
Z69664-5|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical pr... 31 3.1
DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin p... 31 3.1
AF099920-3|AAK29845.1| 216|Caenorhabditis elegans Hypothetical ... 31 3.1
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 31 3.1
AF022968-8|AAB69883.3| 782|Caenorhabditis elegans Chondroitin p... 31 3.1
Z77660-4|CAB01172.1| 501|Caenorhabditis elegans Hypothetical pr... 30 4.1
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 30 4.1
Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical p... 30 5.5
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 30 5.5
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 30 5.5
U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical pr... 30 5.5
AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical ... 30 5.5
AF016674-4|AAB66130.1| 287|Caenorhabditis elegans Hypothetical ... 30 5.5
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z83231-3|CAB05751.1| 247|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z75547-2|CAA99909.2| 622|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z75547-1|CAA99908.2| 621|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z50028-4|CAL36519.1| 298|Caenorhabditis elegans Hypothetical pr... 29 7.2
L15313-1|AAA28202.1| 305|Caenorhabditis elegans Hypothetical pr... 29 7.2
DQ365983-1|ABD14368.1| 298|Caenorhabditis elegans intraflagella... 29 7.2
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 29 7.2
AC084159-9|AAK39358.1| 569|Caenorhabditis elegans Hypothetical ... 29 7.2
Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical pr... 29 9.5
Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical pr... 29 9.5
Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical pr... 29 9.5
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 29 9.5
AF100657-3|AAC68961.1| 335|Caenorhabditis elegans Hypothetical ... 29 9.5
AF099922-1|AAK21410.2| 509|Caenorhabditis elegans Hypothetical ... 29 9.5
AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical ... 29 9.5
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 29 9.5
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin receptor
protein 2 protein.
Length = 1338
Score = 38.7 bits (86), Expect = 0.012
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 203 ININLCCCLGVCTLIYIQAVLGVSSPSQCERIALLLHYTHITCAMWIXXXXXXXXEYCTC 262
I+ NLC CL + L+++ + + + C +A+LLHY ++ W+
Sbjct: 932 IHRNLCLCLLIAELVFVIGMDRTGNRTGCGVVAILLHYFFLSSFCWMLLEGYQLY-MMLI 990
Query: 263 DTLLPLKYN----YLLAYGVPAVVV 283
P + YL YG PAVVV
Sbjct: 991 QVFEPNRTRIFLYYLFCYGTPAVVV 1015
Score = 32.7 bits (71), Expect = 0.78
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 332 LSMEHYEIKHYCWMSIEKGMVMGFMVPAMILILINTGIVILGLKSVNKKQA 382
+ E Y YCW+ + F+ P +++I N +++ LK V Q+
Sbjct: 1021 IKWEDYGTDSYCWIDTSTPTIWAFVAPIIVIIAANIIFLLIALKVVLSVQS 1071
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 38.7 bits (86), Expect = 0.012
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 203 ININLCCCLGVCTLIYIQAVLGVSSPSQCERIALLLHYTHITCAMWIXXXXXXXXEYCTC 262
I+ NLC CL + L+++ + + + C +A+LLHY ++ W+
Sbjct: 932 IHRNLCLCLLIAELVFVIGMDRTGNRTGCGVVAILLHYFFLSSFCWMLLEGYQLY-MMLI 990
Query: 263 DTLLPLKYN----YLLAYGVPAVVV 283
P + YL YG PAVVV
Sbjct: 991 QVFEPNRTRIFLYYLFCYGTPAVVV 1015
Score = 32.7 bits (71), Expect = 0.78
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 332 LSMEHYEIKHYCWMSIEKGMVMGFMVPAMILILINTGIVILGLKSVNKKQA 382
+ E Y YCW+ + F+ P +++I N +++ LK V Q+
Sbjct: 1021 IKWEDYGTDSYCWIDTSTPTIWAFVAPIIVIIAANIIFLLIALKVVLSVQS 1071
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 32.7 bits (71), Expect = 0.78
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 203 ININLCCCLGVCTLIYIQAVLGVSSPSQCERIALLLHYTHITCAMWIXXXXXXXXEYCT- 261
I+ NLC L + + ++ + QC IA+ L Y ++ W+ T
Sbjct: 584 IHENLCLSLAIAEITFLAGITRTEDSLQCGIIAVALMYMFLSALTWMLLEGYHIHRMLTE 643
Query: 262 CDTLLPLKYNYLLAYGVPAVVV 283
P ++ YLL +P ++
Sbjct: 644 VFPSDPRRFTYLLVGYIPPAII 665
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
protein B0457.1a protein.
Length = 1014
Score = 32.7 bits (71), Expect = 0.78
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 203 ININLCCCLGVCTLIYIQAVLGVSSPSQCERIALLLHYTHITCAMWIXXXXXXXXEYCT- 261
I+ NLC L + + ++ + QC IA+ L Y ++ W+ T
Sbjct: 586 IHENLCLSLAIAEITFLAGITRTEDSLQCGIIAVALMYMFLSALTWMLLEGYHIHRMLTE 645
Query: 262 CDTLLPLKYNYLLAYGVPAVVV 283
P ++ YLL +P ++
Sbjct: 646 VFPSDPRRFTYLLVGYIPPAII 667
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 32.7 bits (71), Expect = 0.78
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 203 ININLCCCLGVCTLIYIQAVLGVSSPSQCERIALLLHYTHITCAMWIXXXXXXXXEYCT- 261
I+ NLC L + + ++ + QC IA+ L Y ++ W+ T
Sbjct: 584 IHENLCLSLAIAEITFLAGITRTEDSLQCGIIAVALMYMFLSALTWMLLEGYHIHRMLTE 643
Query: 262 CDTLLPLKYNYLLAYGVPAVVV 283
P ++ YLL +P ++
Sbjct: 644 VFPSDPRRFTYLLVGYIPPAII 665
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 32.7 bits (71), Expect = 0.78
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 203 ININLCCCLGVCTLIYIQAVLGVSSPSQCERIALLLHYTHITCAMWIXXXXXXXXEYCT- 261
I+ NLC L + + ++ + QC IA+ L Y ++ W+ T
Sbjct: 586 IHENLCLSLAIAEITFLAGITRTEDSLQCGIIAVALMYMFLSALTWMLLEGYHIHRMLTE 645
Query: 262 CDTLLPLKYNYLLAYGVPAVVV 283
P ++ YLL +P ++
Sbjct: 646 VFPSDPRRFTYLLVGYIPPAII 667
>AF000195-7|AAC24270.1| 676|Caenorhabditis elegans Oxysterol
binding protein (osbp)related protein 4, isoform a
protein.
Length = 676
Score = 32.7 bits (71), Expect = 0.78
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 408 DKNASIETLDNIYTPSSSRKNTDSSETLDKDYNASEED-YNYSNNGVANDEAGENPIERS 466
D + + LDN + S +++ DS+ T D +S+ED Y++ ++ DE N E
Sbjct: 245 DADEELIDLDNFESEKSGQESGDSNRTSDAAIMSSDEDGYDFGDSNEDFDEIYNNAEEHD 304
Query: 467 ASNKTIQDKSLLNMLYMDNISL 488
N QD + M + +S+
Sbjct: 305 IGN-VQQDHGSVLMHLLSQVSV 325
>Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical
protein W09G3.6 protein.
Length = 1125
Score = 31.5 bits (68), Expect = 1.8
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 364 LINTGIVILGLKSVNKKQAEMLTAKIQELVDHHITNWPKNDQNGDKNASIETLDNI-YTP 422
L+ T I LG S KK+ E L +Q+++D N D N ++ E+L + TP
Sbjct: 414 LLTTIIEGLGTLS-RKKETEKLQLALQKMLDERKINQSTYDNNIEEMERKESLKKLKKTP 472
Query: 423 SSSRKNTDSSETLDKDYNAS--EEDYNYSNNGVANDEAGENP 462
S + + L S ++D+N+S + + +P
Sbjct: 473 ESKKLPSGVHRVLQTAAQCSGYDDDFNFSTPQALRERSRSSP 514
>U28409-4|AAC46590.2| 394|Caenorhabditis elegans Saposin-like
protein family protein11 protein.
Length = 394
Score = 31.5 bits (68), Expect = 1.8
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 553 TTLPIVQQKTPVPPCCEDVVIEPFLTRTRTTDSIPLLDPTVQQPNVTPAPADTISTISI 611
T LP V+ +P I + T T IP + PT++ P++ P T+ I +
Sbjct: 223 TKLPTVEVPDTIPKTLPTTKIPDIVPITSPTVKIPQIIPTIKIPDIIPKNLSTLGPIKL 281
>U21309-5|AAT92085.1| 536|Caenorhabditis elegans Hypothetical
protein C13B9.4b protein.
Length = 536
Score = 31.1 bits (67), Expect = 2.4
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 422 PSSSRKNTDSSET-LDKDYNASEEDYNYSNNGVANDEAGENPIERSASNKT 471
PS S+K +D S T L KD EE+ N +NNG + AGE R SN++
Sbjct: 485 PSRSKKGSDDSTTKLMKD-AVMEEEKNANNNGYGS--AGEMTPLREGSNRS 532
>U21309-4|AAN73883.1| 546|Caenorhabditis elegans Hypothetical
protein C13B9.4a protein.
Length = 546
Score = 31.1 bits (67), Expect = 2.4
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 422 PSSSRKNTDSSET-LDKDYNASEEDYNYSNNGVANDEAGENPIERSASNKT 471
PS S+K +D S T L KD EE+ N +NNG + AGE R SN++
Sbjct: 495 PSRSKKGSDDSTTKLMKD-AVMEEEKNANNNGYGS--AGEMTPLREGSNRS 542
>AY314778-1|AAQ84885.1| 546|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1C protein.
Length = 546
Score = 31.1 bits (67), Expect = 2.4
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 422 PSSSRKNTDSSET-LDKDYNASEEDYNYSNNGVANDEAGENPIERSASNKT 471
PS S+K +D S T L KD EE+ N +NNG + AGE R SN++
Sbjct: 495 PSRSKKGSDDSTTKLMKD-AVMEEEKNANNNGYGS--AGEMTPLREGSNRS 542
>AY314776-1|AAQ84883.1| 536|Caenorhabditis elegans calcitonin
receptor-like proteinSEB-1A protein.
Length = 536
Score = 31.1 bits (67), Expect = 2.4
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 422 PSSSRKNTDSSET-LDKDYNASEEDYNYSNNGVANDEAGENPIERSASNKT 471
PS S+K +D S T L KD EE+ N +NNG + AGE R SN++
Sbjct: 485 PSRSKKGSDDSTTKLMKD-AVMEEEKNANNNGYGS--AGEMTPLREGSNRS 532
>Z69664-5|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical
protein K04D7.5 protein.
Length = 1338
Score = 30.7 bits (66), Expect = 3.1
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 15/104 (14%)
Query: 394 DHHITNWPKNDQNGDKNASIETLDNI--------YTPSSSR--KNTDSSETLDKDYNASE 443
+ ++ N ND + A I TLDN+ + +R K+ D+ E LD + + +
Sbjct: 226 EDYVLNMTLNDTRAESVAPIPTLDNVDDDGFYRDFVTGINRTEKDNDNLEVLDTEDDPDD 285
Query: 444 EDYNYSNNGVANDEAGENPIERSASNKTIQ-DKSLLNMLYMDNI 486
EDYN A+D + + +KT Q + L L +D +
Sbjct: 286 EDYNV----CADDGLNVEDWDETRQDKTTQIPRHELKALMIDTL 325
>DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin
proteoglycan-4 protein.
Length = 782
Score = 30.7 bits (66), Expect = 3.1
Identities = 24/111 (21%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 374 LKSVNKKQAEMLTAKIQELVDHHITNWPKNDQNGDKNASIETLDNIYTPSSSRKNTDSSE 433
L+ +++K E + E+ N + +G+ +AS + DN +SS + ++SE
Sbjct: 510 LEHISEKSTEESSGSSGEMSGDGSDNEASGEGSGEYDASGSSGDNSGEFNSSGSSGEASE 569
Query: 434 TLDKDYNASEEDYNYS------NNGVANDEAGENPIERSASNKTIQDKSLL 478
+ + + NY ++G + +GE + ++S+ +I DKS++
Sbjct: 570 EGESSGSEDQGSGNYKMIESIESSGEFSGSSGEGSGDTASSDTSIDDKSII 620
>AF099920-3|AAK29845.1| 216|Caenorhabditis elegans Hypothetical
protein H06H21.3 protein.
Length = 216
Score = 30.7 bits (66), Expect = 3.1
Identities = 23/122 (18%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Query: 363 ILINTG-IVILGLKSVNKKQAEMLTA----KIQELVDHHIT--NWPKNDQNGDKNASIET 415
+ IN G I+++GL+ + +++ + + L + + N N+ + +E
Sbjct: 69 VWINVGDIILVGLRDYQDDKGDVILKYTPDEARRLKNEGLIPENAKLNENDEQDEGEVEF 128
Query: 416 LDNIYTPSSSRKNTDSSETLDKDYNASEEDYNYSNNGVANDEAGENPIERSASNKTIQDK 475
LD++ + + S++ D D S+E+ ++D++ E E S + I+++
Sbjct: 129 LDHVGDEGEAGEAKSDSDSSDSDSEKSDEEAGSDKEEESDDDSEEESDEDSDDSDNIREE 188
Query: 476 SL 477
L
Sbjct: 189 DL 190
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 30.7 bits (66), Expect = 3.1
Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Query: 553 TTLPIVQQKTPVPPCCEDVVIEPFLTRTRTTDSIPLL--DPTVQQPNVTPAPADTISTIS 610
TT T VP E+ EP T T TT + P T Q P TIST S
Sbjct: 244 TTTTTHSSLTAVPGTTEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTSTISTTS 303
>AF022968-8|AAB69883.3| 782|Caenorhabditis elegans Chondroitin
proteoglycan protein 4 protein.
Length = 782
Score = 30.7 bits (66), Expect = 3.1
Identities = 24/111 (21%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 374 LKSVNKKQAEMLTAKIQELVDHHITNWPKNDQNGDKNASIETLDNIYTPSSSRKNTDSSE 433
L+ +++K E + E+ N + +G+ +AS + DN +SS + ++SE
Sbjct: 510 LEHISEKSTEESSGSSGEMSGDGSDNEASGEGSGEYDASGSSGDNSGEFNSSGSSGEASE 569
Query: 434 TLDKDYNASEEDYNYS------NNGVANDEAGENPIERSASNKTIQDKSLL 478
+ + + NY ++G + +GE + ++S+ +I DKS++
Sbjct: 570 EGESSGSEDQGSGNYKMIESIESSGEFSGSSGEGSGDTASSDTSIDDKSII 620
>Z77660-4|CAB01172.1| 501|Caenorhabditis elegans Hypothetical
protein F38H4.4 protein.
Length = 501
Score = 30.3 bits (65), Expect = 4.1
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 418 NIYTPSSSRKNTDSSETLDKDYNASEEDYNYSNNGVANDEAGENPIERSASNKTIQDK 475
N TPS + K TD + L K + ++ D NN DE ++ E K + K
Sbjct: 117 NKVTPSKASKETDKDDKLQKSKSKTKLDEKSDNNKDIKDEKKDDKKEGKKEEKKDEKK 174
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 30.3 bits (65), Expect = 4.1
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 7/62 (11%)
Query: 554 TLPIVQQKTPVPPCCEDVVIEPFLTRTRT-------TDSIPLLDPTVQQPNVTPAPADTI 606
T+P Q TP PPC T T T T + P P P TP P T
Sbjct: 198 TVPPAVQTTPQPPCTPRTTTTTTTTTTTTTLPPCVYTPAPPATQPPRTYPTTTPRPIPTT 257
Query: 607 ST 608
T
Sbjct: 258 KT 259
>Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 29.9 bits (64), Expect = 5.5
Identities = 20/95 (21%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 402 KNDQNGDKNASIETLDNIYTPSSSRKNTDSSETLDKDYNASEEDYNYSNN-----GVAND 456
+ D++GD +S +++ Y ++++ D + D D S D + GV ++
Sbjct: 933 RTDKSGDDGSSSISINETYVSDENQEDADGDDDNDNDGEESGADDEHQKEDDVELGVIDE 992
Query: 457 EAGEN-PIERSASNK-TIQDKSLLNMLYMDNISLK 489
+ + + R S + T++ K+LL+ + N +K
Sbjct: 993 QEKRHFSLRRRGSRRHTVEQKALLSSIQRFNRKVK 1027
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/73 (24%), Positives = 30/73 (41%)
Query: 401 PKNDQNGDKNASIETLDNIYTPSSSRKNTDSSETLDKDYNASEEDYNYSNNGVANDEAGE 460
P +QN K + + Y+ + + S LDK ++ S ++ SN + G
Sbjct: 1529 PTEEQNLQKEFELTKKEEEYSVKMENRTSAVSIDLDKVFDQSSKETTVSNETDEKIKRGI 1588
Query: 461 NPIERSASNKTIQ 473
ERS K +Q
Sbjct: 1589 AEFERSKQEKEVQ 1601
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/73 (24%), Positives = 30/73 (41%)
Query: 401 PKNDQNGDKNASIETLDNIYTPSSSRKNTDSSETLDKDYNASEEDYNYSNNGVANDEAGE 460
P +QN K + + Y+ + + S LDK ++ S ++ SN + G
Sbjct: 1529 PTEEQNLQKEFELTKKEEEYSVKMENRTSAVSIDLDKVFDQSSKETTVSNETDEKIKRGI 1588
Query: 461 NPIERSASNKTIQ 473
ERS K +Q
Sbjct: 1589 AEFERSKQEKEVQ 1601
>U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical protein
F28B4.3 protein.
Length = 2229
Score = 29.9 bits (64), Expect = 5.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 86 VVSNFTSSIYDDNPQLYPNPEFIAN 110
+VS F + I DDNPQ+ P +F +N
Sbjct: 1364 IVSGFATKIGDDNPQIDPIQDFSSN 1388
>AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 29.9 bits (64), Expect = 5.5
Identities = 20/95 (21%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 402 KNDQNGDKNASIETLDNIYTPSSSRKNTDSSETLDKDYNASEEDYNYSNN-----GVAND 456
+ D++GD +S +++ Y ++++ D + D D S D + GV ++
Sbjct: 933 RTDKSGDDGSSSISINETYVSDENQEDADGDDDNDNDGEESGADDEHQKEDDVELGVIDE 992
Query: 457 EAGEN-PIERSASNK-TIQDKSLLNMLYMDNISLK 489
+ + + R S + T++ K+LL+ + N +K
Sbjct: 993 QEKRHFSLRRRGSRRHTVEQKALLSSIQRFNRKVK 1027
>AF016674-4|AAB66130.1| 287|Caenorhabditis elegans Hypothetical
protein C03H5.3 protein.
Length = 287
Score = 29.9 bits (64), Expect = 5.5
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 60 KHHKAYPRPEDRSDYDITSYDTEYGAVVSNFTSSIYDDNPQLYPNPEFIANSNQGSTKLN 119
+ HK P + D + T+ V S DD+ ++ P ++ N+ + N
Sbjct: 73 EEHKEIVAPSQENSVDDDAESTQLSVDVFADPSDFEDDDDEVVPETDYEDNNEEPK---N 129
Query: 120 DNKISDIELPDDSLADAD 137
D + +E+PD+S +D D
Sbjct: 130 DQ--NPVEIPDNSDSDDD 145
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 564 VPPCCEDVVIEPFLTRTRTTDSIPLLDPTVQQPNVTPAPADTISTIS 610
+PP +P +T TR+T I + +P P A T TIS
Sbjct: 102 LPPSTLKTTTKPVITATRSTARITTTKASTLEPPEAPTKASTARTIS 148
>Z83231-3|CAB05751.1| 247|Caenorhabditis elegans Hypothetical
protein F57G9.3 protein.
Length = 247
Score = 29.5 bits (63), Expect = 7.2
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 177 ILAGAVMWQMWSNYAAEFRMKSKLYPININLCCCLGV 213
ILA +V+ + + Y + + S L+PINI LC + +
Sbjct: 153 ILAFSVIMEFYHFYMCCWNISSNLWPINILLCTAINI 189
>Z75547-2|CAA99909.2| 622|Caenorhabditis elegans Hypothetical
protein R11D1.1b protein.
Length = 622
Score = 29.5 bits (63), Expect = 7.2
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 405 QNGDKNASIETLDNIYTPSSSRKNTDSSETLD-KDYNASEEDYNYSNNGVANDE 457
+NGD+N + DNI + SS+ ++D+SE D D++ +E+ + ++ A +E
Sbjct: 564 ENGDENDNEN--DNIESSSSNSDSSDASEVGDLMDFDGDDEEEDEGDDEAAIEE 615
>Z75547-1|CAA99908.2| 621|Caenorhabditis elegans Hypothetical
protein R11D1.1a protein.
Length = 621
Score = 29.5 bits (63), Expect = 7.2
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 405 QNGDKNASIETLDNIYTPSSSRKNTDSSETLD-KDYNASEEDYNYSNNGVANDE 457
+NGD+N + DNI + SS+ ++D+SE D D++ +E+ + ++ A +E
Sbjct: 563 ENGDENDNEN--DNIESSSSNSDSSDASEVGDLMDFDGDDEEEDEGDDEAAIEE 614
>Z50028-4|CAL36519.1| 298|Caenorhabditis elegans Hypothetical
protein F46F6.4d protein.
Length = 298
Score = 29.5 bits (63), Expect = 7.2
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 96 DDNPQLYPNPEFIANSNQGSTKLNDNKISDIELPDDSLADADLKEHDIIDSVTYLYGYNS 155
D+ P+ P P A SN +++L D+ +D + DD D D E D I +TY+ Y +
Sbjct: 34 DEGPKT-PPPRASAGSNMRASRLEDDSSNDDD-DDDDDEDDDYTE-DEIAILTYIDAYKT 90
>L15313-1|AAA28202.1| 305|Caenorhabditis elegans Hypothetical
protein ZK353.4 protein.
Length = 305
Score = 29.5 bits (63), Expect = 7.2
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 419 IYTPSSSRKNTDSSETLDKDYNASEEDYNYSNNGVANDEAGENPIERSASNKTIQD 474
+Y S +KN + ET + S D NN +A+ EN +++ + T QD
Sbjct: 50 VYLRSQRKKNQLADETGGIEIENSIRDPVVINNSLASRSCSENKVKKQSPESTEQD 105
>DQ365983-1|ABD14368.1| 298|Caenorhabditis elegans intraflagellar
transport proteinvariant c protein.
Length = 298
Score = 29.5 bits (63), Expect = 7.2
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 96 DDNPQLYPNPEFIANSNQGSTKLNDNKISDIELPDDSLADADLKEHDIIDSVTYLYGYNS 155
D+ P+ P P A SN +++L D+ +D + DD D D E D I +TY+ Y +
Sbjct: 34 DEGPKT-PPPRASAGSNMRASRLEDDSSNDDD-DDDDDEDDDYTE-DEIAILTYIDAYKT 90
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 29.5 bits (63), Expect = 7.2
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 554 TLPIVQQKTPVP-PCCEDVVIEPFLTRTRTTDSIPLLDPTVQQPNVTPAP 602
T P VQQ P P P E + P T D+ P P + P V PAP
Sbjct: 77 TAPDVQQPGPAPVPVPEPAQLAPQSAPEPTPDA-PAAAPVQETPQVAPAP 125
>AC084159-9|AAK39358.1| 569|Caenorhabditis elegans Hypothetical
protein Y73B3A.4 protein.
Length = 569
Score = 29.5 bits (63), Expect = 7.2
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 407 GDKNASIETLDNIYTPSSSRKNTDSSETLDKDYNASEEDYNYSNNGVANDEAGENPIERS 466
G N I+ + + + +D SE+ +EED N+ NG+ ND E+ IE +
Sbjct: 89 GTSNLRIDEPEELEELDYNESLSDWSESQKSAEEVAEEDLNFVENGL-NDVKIESEIEET 147
Query: 467 ASNKTIQDKSLLN 479
A I ++ N
Sbjct: 148 AYFPAIPPETAAN 160
>Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical
protein F39D8.1c protein.
Length = 924
Score = 29.1 bits (62), Expect = 9.5
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 555 LPIVQQKTPVPPC-CEDVVIEPFLTRTRTTDS-IPLLDPTVQQPNVTPAPADTISTIS 610
+P+ Q TP P + F T TT S P++ P TP+P ST+S
Sbjct: 572 VPVAGQNTPAPSTQTNQFTQQSFETSPMTTQSPYPVIYPVPSAGQETPSPNQPTSTVS 629
>Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical
protein F39D8.1b protein.
Length = 919
Score = 29.1 bits (62), Expect = 9.5
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 555 LPIVQQKTPVPPC-CEDVVIEPFLTRTRTTDS-IPLLDPTVQQPNVTPAPADTISTIS 610
+P+ Q TP P + F T TT S P++ P TP+P ST+S
Sbjct: 567 VPVAGQNTPAPSTQTNQFTQQSFETSPMTTQSPYPVIYPVPSAGQETPSPNQPTSTVS 624
>Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical
protein F39D8.1a protein.
Length = 945
Score = 29.1 bits (62), Expect = 9.5
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 555 LPIVQQKTPVPPC-CEDVVIEPFLTRTRTTDS-IPLLDPTVQQPNVTPAPADTISTIS 610
+P+ Q TP P + F T TT S P++ P TP+P ST+S
Sbjct: 590 VPVAGQNTPAPSTQTNQFTQQSFETSPMTTQSPYPVIYPVPSAGQETPSPNQPTSTVS 647
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 29.1 bits (62), Expect = 9.5
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 382 AEMLTAKIQELVDHHIT-NWP---KNDQNGDKNASIETLDNIYTPSSSRKNTDSSETLDK 437
A TA + E V T +WP K + NG + S + DN + S+S+ T T +
Sbjct: 144 APAATAPVTETVTVAATQDWPTLAKAELNGHVSPS-NSDDNNESSSNSQHKTGGKMTKNS 202
Query: 438 DYNAS-EEDYNYSNNGVANDEAGENPIERSASNKTIQDKS 476
DY G GE RSA+++ ++ +S
Sbjct: 203 WKKVDISVDYGSKGKGAPRGNGGEKGTRRSANDEAVRRRS 242
>AF100657-3|AAC68961.1| 335|Caenorhabditis elegans Hypothetical
protein F52C12.3 protein.
Length = 335
Score = 29.1 bits (62), Expect = 9.5
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 357 VPAMILILINTGIVILGLKSVNKKQAEMLTAKIQELVDHHITNW 400
+P +L I T ++ LK + VDHH+TNW
Sbjct: 182 LPLEMLESIQTSTILQNLKPPTPNRPPCRPPSYWPFVDHHVTNW 225
>AF099922-1|AAK21410.2| 509|Caenorhabditis elegans Hypothetical
protein F56F11.5 protein.
Length = 509
Score = 29.1 bits (62), Expect = 9.5
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 385 LTAKIQELVDHHITNWPKNDQNGDKNASIETLDNIYTPSSSRKNTDSSETLDKDY 439
L ++++L IT+ N + G + A IE L YT S S+ DSS++ +DY
Sbjct: 167 LKEELEQLACKVITHLQLNGEQGPRQA-IEALQADYTSSFSQSRKDSSKSY-RDY 219
>AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical
protein F23H11.4b protein.
Length = 598
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 408 DKNASIETLDNIYTPSSSRKNTDSSETLDKDYNASEEDYNYSNNGVAN 455
D SI++ +N YTP R + D+SE + + ++ + Y++N N
Sbjct: 213 DSRPSIDSEENPYTPCPRRSDYDNSEFIGSTIDPFDDSF-YTDNTTNN 259
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 408 DKNASIETLDNIYTPSSSRKNTDSSETLDKDYNASEEDYNYSNNGVAN 455
D SI++ +N YTP R + D+SE + + ++ + Y++N N
Sbjct: 213 DSRPSIDSEENPYTPCPRRSDYDNSEFIGSTIDPFDDSF-YTDNTTNN 259
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.133 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,574,526
Number of Sequences: 27539
Number of extensions: 687537
Number of successful extensions: 2479
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 2442
Number of HSP's gapped (non-prelim): 65
length of query: 611
length of database: 12,573,161
effective HSP length: 86
effective length of query: 525
effective length of database: 10,204,807
effective search space: 5357523675
effective search space used: 5357523675
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -