Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000089-TA|BGIBMGA000089-PA|undefined
(611 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 29 0.11
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 27 0.34
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 25 1.4
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 25 2.4
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 25 2.4
DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 24 3.2
AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 24 3.2
AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 24 3.2
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 5.5
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 5.5
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 5.5
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 5.5
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 5.5
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 7.3
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 7.3
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 7.3
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 7.3
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 29.1 bits (62), Expect = 0.11
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 423 SSSRKNTDSSETLDKDYNA-SEEDYNYSNNGVANDEAGENPIERSASNKTIQDKSLLNML 481
S SR+ +S +++Y E S + + + E I S SNKTI + + N
Sbjct: 273 SRSREREQNSYKNEREYRKYRERSKERSRDRTERERSREPKIISSLSNKTIHNNNNYNNN 332
Query: 482 YMDNISLKWSWNTEGNELKTYLNL 505
+N ++ N N K Y N+
Sbjct: 333 NYNNNYNNYNNNNYNNYKKLYYNI 356
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 27.5 bits (58), Expect = 0.34
Identities = 16/74 (21%), Positives = 31/74 (41%)
Query: 396 HITNWPKNDQNGDKNASIETLDNIYTPSSSRKNTDSSETLDKDYNASEEDYNYSNNGVAN 455
HI P++++ + A L+ S++ T + + N + + N +NN AN
Sbjct: 196 HIDWQPEDEECTEATAGAVVLETCQRNSNNSTITAGNANTNASNNNNNNNNNNNNNNGAN 255
Query: 456 DEAGENPIERSASN 469
D N + +N
Sbjct: 256 DNGNGNGASNNNNN 269
Score = 23.8 bits (49), Expect = 4.2
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 410 NASIETLDNIYTPSSSRKNTDSSETLDKDYNASEEDYNYSNNGVAND 456
+ I+ D++ + DSS+T+D D + S+ S N +D
Sbjct: 320 STDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSD 366
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 25.4 bits (53), Expect = 1.4
Identities = 16/79 (20%), Positives = 33/79 (41%)
Query: 378 NKKQAEMLTAKIQELVDHHITNWPKNDQNGDKNASIETLDNIYTPSSSRKNTDSSETLDK 437
N +L A + +L+ + N G++NA + DN + + N ++++
Sbjct: 399 NDVNFRILGANVDDLMRNTRCGRYHNQNAGNQNADNQNADNQNANNQNADNQNANKQNGN 458
Query: 438 DYNASEEDYNYSNNGVAND 456
N + ++ N N ND
Sbjct: 459 RQNDNRQNDNKQNGNRQND 477
Score = 23.8 bits (49), Expect = 4.2
Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 399 NWPKNDQNGD-KNASIETLDNIYTPSSSRKNTDSSETLDKDYNASEEDYNYSNNGVAND 456
N ++QN D +NA+ + DN + + + D N + ++ N N ND
Sbjct: 429 NQNADNQNADNQNANNQNADNQNANKQNGNRQNDNRQNDNKQNGNRQNDNKQNGNRQND 487
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 24.6 bits (51), Expect = 2.4
Identities = 11/60 (18%), Positives = 26/60 (43%)
Query: 374 LKSVNKKQAEMLTAKIQELVDHHITNWPKNDQNGDKNASIETLDNIYTPSSSRKNTDSSE 433
L++ KK E + + + + + NW K + + ++ + +D + TD S+
Sbjct: 44 LQTHMKKVREQMAGILSRIPEQGVVNWNKIPEGANTTSTTKIIDGHVVTINETTYTDGSD 103
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.6 bits (51), Expect = 2.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 365 INTGIVILGLKSVNKKQAEMLTAKI 389
++TGI+I L +V K + +L AK+
Sbjct: 46 VHTGILIKALLTVQAKDSNVLAAKV 70
>DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1
precursor protein.
Length = 223
Score = 24.2 bits (50), Expect = 3.2
Identities = 10/55 (18%), Positives = 23/55 (41%)
Query: 379 KKQAEMLTAKIQELVDHHITNWPKNDQNGDKNASIETLDNIYTPSSSRKNTDSSE 433
KK E + + + + + NW K + + ++ + +D + TD S+
Sbjct: 97 KKVREQMAGILSRIPEQGVVNWNKIPEGANTTSTTKIIDGHVVTINETTYTDGSD 151
>AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich
protein precursor protein.
Length = 223
Score = 24.2 bits (50), Expect = 3.2
Identities = 10/55 (18%), Positives = 23/55 (41%)
Query: 379 KKQAEMLTAKIQELVDHHITNWPKNDQNGDKNASIETLDNIYTPSSSRKNTDSSE 433
KK E + + + + + NW K + + ++ + +D + TD S+
Sbjct: 97 KKVREQMAGILSRIPEQGVVNWNKIPEGANTTSTTKIIDGHVVTINETTYTDGSD 151
>AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein.
Length = 223
Score = 24.2 bits (50), Expect = 3.2
Identities = 10/55 (18%), Positives = 23/55 (41%)
Query: 379 KKQAEMLTAKIQELVDHHITNWPKNDQNGDKNASIETLDNIYTPSSSRKNTDSSE 433
KK E + + + + + NW K + + ++ + +D + TD S+
Sbjct: 97 KKVREQMAGILSRIPEQGVVNWNKIPEGANTTSTTKIIDGHVVAINETTYTDGSD 151
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 5.5
Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 10/96 (10%)
Query: 44 FKEQKSSYRPYQPVSVKHHKAYPRPEDRSDYDITSYD----------TEYGAVVSNFTSS 93
F E+K+S + Y + K+Y + +Y TS + ++ ++S+ +++
Sbjct: 29 FLEEKTSRKRYSRSREREQKSYKNEREYREYRETSRERSRDRKERERSKEPKIISSLSNN 88
Query: 94 IYDDNPQLYPNPEFIANSNQGSTKLNDNKISDIELP 129
N Y N + N+ + N N I I +P
Sbjct: 89 YKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIP 124
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 5.5
Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 10/96 (10%)
Query: 44 FKEQKSSYRPYQPVSVKHHKAYPRPEDRSDYDITSYD----------TEYGAVVSNFTSS 93
F E+K+S + Y + K+Y + +Y TS + ++ ++S+ +++
Sbjct: 29 FLEEKTSRKRYSRSREREQKSYKNEREYREYRETSRERSRDRKERERSKEPKIISSLSNN 88
Query: 94 IYDDNPQLYPNPEFIANSNQGSTKLNDNKISDIELP 129
N Y N + N+ + N N I I +P
Sbjct: 89 YKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIP 124
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 5.5
Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 10/96 (10%)
Query: 44 FKEQKSSYRPYQPVSVKHHKAYPRPEDRSDYDITSYD----------TEYGAVVSNFTSS 93
F E+K+S + Y + K+Y + +Y TS + ++ ++S+ +++
Sbjct: 29 FLEEKTSRKRYSRSREREQKSYKNEREYREYRETSRERSRDRKERERSKEPKIISSLSNN 88
Query: 94 IYDDNPQLYPNPEFIANSNQGSTKLNDNKISDIELP 129
N Y N + N+ + N N I I +P
Sbjct: 89 YKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIP 124
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 5.5
Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 10/96 (10%)
Query: 44 FKEQKSSYRPYQPVSVKHHKAYPRPEDRSDYDITSYD----------TEYGAVVSNFTSS 93
F E+K+S + Y + K+Y + +Y TS + ++ ++S+ +++
Sbjct: 29 FLEEKTSRKRYSRSREREQKSYKNEREYREYRETSRERSRDRKERERSKEPKIISSLSNN 88
Query: 94 IYDDNPQLYPNPEFIANSNQGSTKLNDNKISDIELP 129
N Y N + N+ + N N I I +P
Sbjct: 89 YKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIP 124
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 23.4 bits (48), Expect = 5.5
Identities = 20/87 (22%), Positives = 31/87 (35%), Gaps = 4/87 (4%)
Query: 18 FAQTHYALQQNKTVYNVRRLSAGNGFFKEQKSSYRPYQPVSVKHHKAYPRPEDRSDYDIT 77
FAQ YA++ N+T N S KS + V + K R +
Sbjct: 536 FAQNLYAMKMNETYIN----SGNKISLATSKSFIKANSQTEVSNSKKLDRLDSLRGSTTD 591
Query: 78 SYDTEYGAVVSNFTSSIYDDNPQLYPN 104
S + +SN +++ YPN
Sbjct: 592 SQTEDNFGPLSNVRFAVFALGSSAYPN 618
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 23.0 bits (47), Expect = 7.3
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 260 CTCDTLLPLKYNYLLAYGVPAVVVMSTDTKLAMAERW 296
C PLK ++ YGVP + + DT+ + W
Sbjct: 192 CVGSAYTPLKEDHDDHYGVPTLEELGFDTEGLLPPVW 228
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 7.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 139 KEHDIIDSVTYLYGYNS 155
KEH II S++ Y YN+
Sbjct: 77 KEHKIISSLSNNYNYNN 93
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 7.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 139 KEHDIIDSVTYLYGYNS 155
KEH II S++ Y YN+
Sbjct: 77 KEHKIISSLSNNYNYNN 93
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 7.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 139 KEHDIIDSVTYLYGYNS 155
KEH II S++ Y YN+
Sbjct: 77 KEHKIISSLSNNYNYNN 93
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.319 0.133 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,358
Number of Sequences: 429
Number of extensions: 8636
Number of successful extensions: 37
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 19
length of query: 611
length of database: 140,377
effective HSP length: 62
effective length of query: 549
effective length of database: 113,779
effective search space: 62464671
effective search space used: 62464671
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)
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