Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000088-TA|BGIBMGA000088-PA|IPR009617|Protein of unknown
function DUF1226
         (208 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC093048-1|AAH93048.1|  398|Homo sapiens Bernardinelli-Seip cong...    72   1e-12
BC041640-1|AAH41640.1|  398|Homo sapiens BSCL2 protein protein.        72   1e-12
BC012140-1|AAH12140.1|  398|Homo sapiens BSCL2 protein protein.        72   1e-12
BC009866-1|AAH09866.2|  400|Homo sapiens Bernardinelli-Seip cong...    72   1e-12
BC004911-1|AAH04911.1|  398|Homo sapiens BSCL2 protein protein.        72   1e-12
AK075317-1|BAC11543.1|  398|Homo sapiens protein ( Homo sapiens ...    72   1e-12
AK223606-1|BAD97326.1|  398|Homo sapiens seipin variant protein.       71   2e-12
AK027524-1|BAB55175.1|  287|Homo sapiens protein ( Homo sapiens ...    58   2e-08
AL121754-2|CAC01509.1|  109|Homo sapiens taspase, threonine aspa...    30   6.6  
CR457154-1|CAG33435.1|  137|Homo sapiens SELT protein.                 29   8.8  
BC071699-1|AAH71699.1|  195|Homo sapiens selenoprotein T protein.      29   8.8  
BC036738-1|AAH36738.3|  195|Homo sapiens selenoprotein T protein.      29   8.8  
BC026350-1|AAH26350.2|  195|Homo sapiens selenoprotein T protein.      29   8.8  
BC009611-1|AAH09611.2|  195|Homo sapiens selenoprotein T protein.      29   8.8  
BC009556-1|AAH09556.2|  195|Homo sapiens selenoprotein T protein.      29   8.8  
BC008411-1|AAH08411.2|  195|Homo sapiens selenoprotein T protein.      29   8.8  
BC006012-1|AAH06012.2|  195|Homo sapiens selenoprotein T protein.      29   8.8  
AY358096-1|AAQ88463.1|  137|Homo sapiens SELT protein.                 29   8.8  
AY358095-1|AAQ88462.1|  137|Homo sapiens SELT protein.                 29   8.8  
AF195141-1|AAF13696.1|  163|Homo sapiens selenoprotein T protein.      29   8.8  
AF131856-1|AAD20063.1|  137|Homo sapiens Unknown protein.              29   8.8  

>BC093048-1|AAH93048.1|  398|Homo sapiens Bernardinelli-Seip
           congenital lipodystrophy 2 (seipin) protein.
          Length = 398

 Score = 72.1 bits (169), Expect = 1e-12
 Identities = 29/65 (44%), Positives = 46/65 (70%)

Query: 4   LLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGLRYL 63
           LL+    E+KQ ++V+L+ ++ ++   P T A +E+ S+ +Q+YG  L I AHFTGLRYL
Sbjct: 167 LLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLRYL 226

Query: 64  MYNWP 68
           +YN+P
Sbjct: 227 LYNFP 231


>BC041640-1|AAH41640.1|  398|Homo sapiens BSCL2 protein protein.
          Length = 398

 Score = 72.1 bits (169), Expect = 1e-12
 Identities = 29/65 (44%), Positives = 46/65 (70%)

Query: 4   LLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGLRYL 63
           LL+    E+KQ ++V+L+ ++ ++   P T A +E+ S+ +Q+YG  L I AHFTGLRYL
Sbjct: 167 LLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLRYL 226

Query: 64  MYNWP 68
           +YN+P
Sbjct: 227 LYNFP 231


>BC012140-1|AAH12140.1|  398|Homo sapiens BSCL2 protein protein.
          Length = 398

 Score = 72.1 bits (169), Expect = 1e-12
 Identities = 29/65 (44%), Positives = 46/65 (70%)

Query: 4   LLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGLRYL 63
           LL+    E+KQ ++V+L+ ++ ++   P T A +E+ S+ +Q+YG  L I AHFTGLRYL
Sbjct: 167 LLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLRYL 226

Query: 64  MYNWP 68
           +YN+P
Sbjct: 227 LYNFP 231


>BC009866-1|AAH09866.2|  400|Homo sapiens Bernardinelli-Seip
           congenital lipodystrophy 2 (seipin) protein.
          Length = 400

 Score = 72.1 bits (169), Expect = 1e-12
 Identities = 29/65 (44%), Positives = 46/65 (70%)

Query: 4   LLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGLRYL 63
           LL+    E+KQ ++V+L+ ++ ++   P T A +E+ S+ +Q+YG  L I AHFTGLRYL
Sbjct: 167 LLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLRYL 226

Query: 64  MYNWP 68
           +YN+P
Sbjct: 227 LYNFP 231


>BC004911-1|AAH04911.1|  398|Homo sapiens BSCL2 protein protein.
          Length = 398

 Score = 72.1 bits (169), Expect = 1e-12
 Identities = 29/65 (44%), Positives = 46/65 (70%)

Query: 4   LLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGLRYL 63
           LL+    E+KQ ++V+L+ ++ ++   P T A +E+ S+ +Q+YG  L I AHFTGLRYL
Sbjct: 167 LLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLRYL 226

Query: 64  MYNWP 68
           +YN+P
Sbjct: 227 LYNFP 231


>AK075317-1|BAC11543.1|  398|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90836 fis, clone Y79AA1002058, moderately
           similar to Mus musculus Gng3lg mRNA. ).
          Length = 398

 Score = 72.1 bits (169), Expect = 1e-12
 Identities = 29/65 (44%), Positives = 46/65 (70%)

Query: 4   LLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGLRYL 63
           LL+    E+KQ ++V+L+ ++ ++   P T A +E+ S+ +Q+YG  L I AHFTGLRYL
Sbjct: 167 LLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLRYL 226

Query: 64  MYNWP 68
           +YN+P
Sbjct: 227 LYNFP 231


>AK223606-1|BAD97326.1|  398|Homo sapiens seipin variant protein.
          Length = 398

 Score = 71.3 bits (167), Expect = 2e-12
 Identities = 29/65 (44%), Positives = 46/65 (70%)

Query: 4   LLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGLRYL 63
           LL+    E+KQ ++V+L+ ++ ++   P T A +E+ S+ +Q+YG  L I AHFTGLRYL
Sbjct: 167 LLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGTYLRIHAHFTGLRYL 226

Query: 64  MYNWP 68
           +YN+P
Sbjct: 227 LYNFP 231


>AK027524-1|BAB55175.1|  287|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14618 fis, clone NT2RP1001449, highly similar to
           Mus musculus Gng3lg mRNA. ).
          Length = 287

 Score = 58.4 bits (135), Expect = 2e-08
 Identities = 24/58 (41%), Positives = 39/58 (67%)

Query: 4   LLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGLR 61
           LL+    E+KQ ++V+L+ ++ ++   P T A +E+ S+ +Q+YG  L I AHFTGLR
Sbjct: 167 LLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLR 224


>AL121754-2|CAC01509.1|  109|Homo sapiens taspase, threonine
           aspartase, 1 protein.
          Length = 109

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 13/36 (36%), Positives = 21/36 (58%)

Query: 71  SALFDFDLSWKTHIDVICKRAELGLNILKSLTGVKW 106
           +AL + +L WK    V+C    L L+I+K+ T  K+
Sbjct: 65  AALVELELMWKGQFQVLCVLTNLFLDIIKNPTKTKF 100


>CR457154-1|CAG33435.1|  137|Homo sapiens SELT protein.
          Length = 137

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
           +WG + KV   + +  + +  +  C+ST  F ITL     W  L+ G
Sbjct: 61  QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 107


>BC071699-1|AAH71699.1|  195|Homo sapiens selenoprotein T protein.
          Length = 195

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
           +WG + KV   + +  + +  +  C+ST  F ITL     W  L+ G
Sbjct: 119 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 165


>BC036738-1|AAH36738.3|  195|Homo sapiens selenoprotein T protein.
          Length = 195

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
           +WG + KV   + +  + +  +  C+ST  F ITL     W  L+ G
Sbjct: 119 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 165


>BC026350-1|AAH26350.2|  195|Homo sapiens selenoprotein T protein.
          Length = 195

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
           +WG + KV   + +  + +  +  C+ST  F ITL     W  L+ G
Sbjct: 119 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 165


>BC009611-1|AAH09611.2|  195|Homo sapiens selenoprotein T protein.
          Length = 195

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
           +WG + KV   + +  + +  +  C+ST  F ITL     W  L+ G
Sbjct: 119 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 165


>BC009556-1|AAH09556.2|  195|Homo sapiens selenoprotein T protein.
          Length = 195

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
           +WG + KV   + +  + +  +  C+ST  F ITL     W  L+ G
Sbjct: 119 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 165


>BC008411-1|AAH08411.2|  195|Homo sapiens selenoprotein T protein.
          Length = 195

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
           +WG + KV   + +  + +  +  C+ST  F ITL     W  L+ G
Sbjct: 119 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 165


>BC006012-1|AAH06012.2|  195|Homo sapiens selenoprotein T protein.
          Length = 195

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
           +WG + KV   + +  + +  +  C+ST  F ITL     W  L+ G
Sbjct: 119 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 165


>AY358096-1|AAQ88463.1|  137|Homo sapiens SELT protein.
          Length = 137

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
           +WG + KV   + +  + +  +  C+ST  F ITL     W  L+ G
Sbjct: 61  QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 107


>AY358095-1|AAQ88462.1|  137|Homo sapiens SELT protein.
          Length = 137

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
           +WG + KV   + +  + +  +  C+ST  F ITL     W  L+ G
Sbjct: 61  QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 107


>AF195141-1|AAF13696.1|  163|Homo sapiens selenoprotein T protein.
          Length = 163

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
           +WG + KV   + +  + +  +  C+ST  F ITL     W  L+ G
Sbjct: 87  QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 133


>AF131856-1|AAD20063.1|  137|Homo sapiens Unknown protein.
          Length = 137

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
           +WG + KV   + +  + +  +  C+ST  F ITL     W  L+ G
Sbjct: 61  QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 107


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.321    0.138    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,656,579
Number of Sequences: 224733
Number of extensions: 1160733
Number of successful extensions: 1604
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1583
Number of HSP's gapped (non-prelim): 21
length of query: 208
length of database: 73,234,838
effective HSP length: 87
effective length of query: 121
effective length of database: 53,683,067
effective search space: 6495651107
effective search space used: 6495651107
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)