GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000088-TA|BGIBMGA000088-PA|IPR009617|Protein of unknown
function DUF1226
         (208 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.44 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.44 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.44 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.44 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   2.3  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   4.1  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    22   4.1  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.1  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.1  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   5.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   5.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.4  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 117 YIATIRSHFDYGCIST--NLFFITLVFALS--WYHLQEGLPEFIKSKLGTTPDK 166
           Y  TI +H D        N   IT ++A +  W+  +E + EF+KS L    D+
Sbjct: 538 YYETISNHTDASSAKAVKNSDHITRIYACATMWHENKEEMMEFLKSILRLDEDQ 591


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 117 YIATIRSHFDYGCIST--NLFFITLVFALS--WYHLQEGLPEFIKSKLGTTPDK 166
           Y  TI +H D        N   IT ++A +  W+  +E + EF+KS L    D+
Sbjct: 538 YYETISNHTDASSAKAVKNSDHITRIYACATMWHENKEEMMEFLKSILRLDEDQ 591


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 117 YIATIRSHFDYGCIST--NLFFITLVFALS--WYHLQEGLPEFIKSKLGTTPDK 166
           Y  TI +H D        N   IT ++A +  W+  +E + EF+KS L    D+
Sbjct: 538 YYETISNHTDASSAKAVKNSDHITRIYACATMWHENKEEMMEFLKSILRLDEDQ 591


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 117 YIATIRSHFDYGCIST--NLFFITLVFALS--WYHLQEGLPEFIKSKLGTTPDK 166
           Y  TI +H D        N   IT ++A +  W+  +E + EF+KS L    D+
Sbjct: 538 YYETISNHTDASSAKAVKNSDHITRIYACATMWHENKEEMMEFLKSILRLDEDQ 591


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 13 KQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQL 51
          K ++++    EFD D   P +  ++E Q+    V+   +
Sbjct: 3  KDSLEIVKNEEFDSDSKLPFSGLFIENQAGNAPVFNNYM 41


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)

Query: 127 YGCISTNLFFITL 139
           +GC+ST LF+  L
Sbjct: 271 FGCLSTRLFYYQL 283


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
          oxygenase protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)

Query: 5  LMSDVVEEKQTIQV 18
          + SDV+EE QT+++
Sbjct: 18 IFSDVLEESQTLEI 31


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
          oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)

Query: 5  LMSDVVEEKQTIQV 18
          + SDV+EE QT+++
Sbjct: 78 IFSDVLEESQTLEI 91


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
          oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)

Query: 5  LMSDVVEEKQTIQV 18
          + SDV+EE QT+++
Sbjct: 78 IFSDVLEESQTLEI 91


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
          protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/34 (26%), Positives = 15/34 (44%)

Query: 19 DLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLH 52
          D F    +D N P  + YVE  +  +     ++H
Sbjct: 44 DAFIRTSEDDNDPHVNEYVESLASIIDEAATKVH 77


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/34 (26%), Positives = 15/34 (44%)

Query: 19  DLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLH 52
           D F    +D N P  + YVE  +  +     ++H
Sbjct: 358 DAFIRTSEDDNDPHVNEYVESLASIIDEAATKVH 391


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/34 (26%), Positives = 15/34 (44%)

Query: 19  DLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLH 52
           D F    +D N P  + YVE  +  +     ++H
Sbjct: 591 DAFIRTSEDDNDPHVNEYVESLASIIDEAATKVH 624


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/34 (26%), Positives = 15/34 (44%)

Query: 19  DLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLH 52
           D F    +D N P  + YVE  +  +     ++H
Sbjct: 591 DAFIRTSEDDNDPHVNEYVESLASIIDEAATKVH 624


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 62  YLMYNWPKFSALFDFDLSWKTHIDVI 87
           ++  + PKFSA   FD+   T + V+
Sbjct: 312 FVSQHLPKFSAANFFDIERSTILSVL 337


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.138    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,000
Number of Sequences: 317
Number of extensions: 1940
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of query: 208
length of database: 114,650
effective HSP length: 54
effective length of query: 154
effective length of database: 97,532
effective search space: 15019928
effective search space used: 15019928
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)