Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000088-TA|BGIBMGA000088-PA|IPR009617|Protein of unknown
function DUF1226
(208 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC093048-1|AAH93048.1| 398|Homo sapiens Bernardinelli-Seip cong... 72 1e-12
BC041640-1|AAH41640.1| 398|Homo sapiens BSCL2 protein protein. 72 1e-12
BC012140-1|AAH12140.1| 398|Homo sapiens BSCL2 protein protein. 72 1e-12
BC009866-1|AAH09866.2| 400|Homo sapiens Bernardinelli-Seip cong... 72 1e-12
BC004911-1|AAH04911.1| 398|Homo sapiens BSCL2 protein protein. 72 1e-12
AK075317-1|BAC11543.1| 398|Homo sapiens protein ( Homo sapiens ... 72 1e-12
AK223606-1|BAD97326.1| 398|Homo sapiens seipin variant protein. 71 2e-12
AK027524-1|BAB55175.1| 287|Homo sapiens protein ( Homo sapiens ... 58 2e-08
AL121754-2|CAC01509.1| 109|Homo sapiens taspase, threonine aspa... 30 6.6
CR457154-1|CAG33435.1| 137|Homo sapiens SELT protein. 29 8.8
BC071699-1|AAH71699.1| 195|Homo sapiens selenoprotein T protein. 29 8.8
BC036738-1|AAH36738.3| 195|Homo sapiens selenoprotein T protein. 29 8.8
BC026350-1|AAH26350.2| 195|Homo sapiens selenoprotein T protein. 29 8.8
BC009611-1|AAH09611.2| 195|Homo sapiens selenoprotein T protein. 29 8.8
BC009556-1|AAH09556.2| 195|Homo sapiens selenoprotein T protein. 29 8.8
BC008411-1|AAH08411.2| 195|Homo sapiens selenoprotein T protein. 29 8.8
BC006012-1|AAH06012.2| 195|Homo sapiens selenoprotein T protein. 29 8.8
AY358096-1|AAQ88463.1| 137|Homo sapiens SELT protein. 29 8.8
AY358095-1|AAQ88462.1| 137|Homo sapiens SELT protein. 29 8.8
AF195141-1|AAF13696.1| 163|Homo sapiens selenoprotein T protein. 29 8.8
AF131856-1|AAD20063.1| 137|Homo sapiens Unknown protein. 29 8.8
>BC093048-1|AAH93048.1| 398|Homo sapiens Bernardinelli-Seip
congenital lipodystrophy 2 (seipin) protein.
Length = 398
Score = 72.1 bits (169), Expect = 1e-12
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 4 LLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGLRYL 63
LL+ E+KQ ++V+L+ ++ ++ P T A +E+ S+ +Q+YG L I AHFTGLRYL
Sbjct: 167 LLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLRYL 226
Query: 64 MYNWP 68
+YN+P
Sbjct: 227 LYNFP 231
>BC041640-1|AAH41640.1| 398|Homo sapiens BSCL2 protein protein.
Length = 398
Score = 72.1 bits (169), Expect = 1e-12
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 4 LLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGLRYL 63
LL+ E+KQ ++V+L+ ++ ++ P T A +E+ S+ +Q+YG L I AHFTGLRYL
Sbjct: 167 LLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLRYL 226
Query: 64 MYNWP 68
+YN+P
Sbjct: 227 LYNFP 231
>BC012140-1|AAH12140.1| 398|Homo sapiens BSCL2 protein protein.
Length = 398
Score = 72.1 bits (169), Expect = 1e-12
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 4 LLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGLRYL 63
LL+ E+KQ ++V+L+ ++ ++ P T A +E+ S+ +Q+YG L I AHFTGLRYL
Sbjct: 167 LLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLRYL 226
Query: 64 MYNWP 68
+YN+P
Sbjct: 227 LYNFP 231
>BC009866-1|AAH09866.2| 400|Homo sapiens Bernardinelli-Seip
congenital lipodystrophy 2 (seipin) protein.
Length = 400
Score = 72.1 bits (169), Expect = 1e-12
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 4 LLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGLRYL 63
LL+ E+KQ ++V+L+ ++ ++ P T A +E+ S+ +Q+YG L I AHFTGLRYL
Sbjct: 167 LLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLRYL 226
Query: 64 MYNWP 68
+YN+P
Sbjct: 227 LYNFP 231
>BC004911-1|AAH04911.1| 398|Homo sapiens BSCL2 protein protein.
Length = 398
Score = 72.1 bits (169), Expect = 1e-12
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 4 LLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGLRYL 63
LL+ E+KQ ++V+L+ ++ ++ P T A +E+ S+ +Q+YG L I AHFTGLRYL
Sbjct: 167 LLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLRYL 226
Query: 64 MYNWP 68
+YN+P
Sbjct: 227 LYNFP 231
>AK075317-1|BAC11543.1| 398|Homo sapiens protein ( Homo sapiens
cDNA FLJ90836 fis, clone Y79AA1002058, moderately
similar to Mus musculus Gng3lg mRNA. ).
Length = 398
Score = 72.1 bits (169), Expect = 1e-12
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 4 LLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGLRYL 63
LL+ E+KQ ++V+L+ ++ ++ P T A +E+ S+ +Q+YG L I AHFTGLRYL
Sbjct: 167 LLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLRYL 226
Query: 64 MYNWP 68
+YN+P
Sbjct: 227 LYNFP 231
>AK223606-1|BAD97326.1| 398|Homo sapiens seipin variant protein.
Length = 398
Score = 71.3 bits (167), Expect = 2e-12
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 4 LLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGLRYL 63
LL+ E+KQ ++V+L+ ++ ++ P T A +E+ S+ +Q+YG L I AHFTGLRYL
Sbjct: 167 LLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGTYLRIHAHFTGLRYL 226
Query: 64 MYNWP 68
+YN+P
Sbjct: 227 LYNFP 231
>AK027524-1|BAB55175.1| 287|Homo sapiens protein ( Homo sapiens
cDNA FLJ14618 fis, clone NT2RP1001449, highly similar to
Mus musculus Gng3lg mRNA. ).
Length = 287
Score = 58.4 bits (135), Expect = 2e-08
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 4 LLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGLR 61
LL+ E+KQ ++V+L+ ++ ++ P T A +E+ S+ +Q+YG L I AHFTGLR
Sbjct: 167 LLLFGFAEQKQLLEVELYADYRENSYVPTTGAIIEIHSKRIQLYGAYLRIHAHFTGLR 224
>AL121754-2|CAC01509.1| 109|Homo sapiens taspase, threonine
aspartase, 1 protein.
Length = 109
Score = 29.9 bits (64), Expect = 6.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 71 SALFDFDLSWKTHIDVICKRAELGLNILKSLTGVKW 106
+AL + +L WK V+C L L+I+K+ T K+
Sbjct: 65 AALVELELMWKGQFQVLCVLTNLFLDIIKNPTKTKF 100
>CR457154-1|CAG33435.1| 137|Homo sapiens SELT protein.
Length = 137
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
+WG + KV + + + + + C+ST F ITL W L+ G
Sbjct: 61 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 107
>BC071699-1|AAH71699.1| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
+WG + KV + + + + + C+ST F ITL W L+ G
Sbjct: 119 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 165
>BC036738-1|AAH36738.3| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
+WG + KV + + + + + C+ST F ITL W L+ G
Sbjct: 119 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 165
>BC026350-1|AAH26350.2| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
+WG + KV + + + + + C+ST F ITL W L+ G
Sbjct: 119 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 165
>BC009611-1|AAH09611.2| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
+WG + KV + + + + + C+ST F ITL W L+ G
Sbjct: 119 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 165
>BC009556-1|AAH09556.2| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
+WG + KV + + + + + C+ST F ITL W L+ G
Sbjct: 119 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 165
>BC008411-1|AAH08411.2| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
+WG + KV + + + + + C+ST F ITL W L+ G
Sbjct: 119 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 165
>BC006012-1|AAH06012.2| 195|Homo sapiens selenoprotein T protein.
Length = 195
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
+WG + KV + + + + + C+ST F ITL W L+ G
Sbjct: 119 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 165
>AY358096-1|AAQ88463.1| 137|Homo sapiens SELT protein.
Length = 137
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
+WG + KV + + + + + C+ST F ITL W L+ G
Sbjct: 61 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 107
>AY358095-1|AAQ88462.1| 137|Homo sapiens SELT protein.
Length = 137
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
+WG + KV + + + + + C+ST F ITL W L+ G
Sbjct: 61 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 107
>AF195141-1|AAF13696.1| 163|Homo sapiens selenoprotein T protein.
Length = 163
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
+WG + KV + + + + + C+ST F ITL W L+ G
Sbjct: 87 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 133
>AF131856-1|AAD20063.1| 137|Homo sapiens Unknown protein.
Length = 137
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 105 KWGADPKVLKTIYIATIRSHFDYGCISTNLFFITLVFALSWYHLQEG 151
+WG + KV + + + + + C+ST F ITL W L+ G
Sbjct: 61 QWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVPVWSKLESG 107
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.321 0.138 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,656,579
Number of Sequences: 224733
Number of extensions: 1160733
Number of successful extensions: 1604
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1583
Number of HSP's gapped (non-prelim): 21
length of query: 208
length of database: 73,234,838
effective HSP length: 87
effective length of query: 121
effective length of database: 53,683,067
effective search space: 6495651107
effective search space used: 6495651107
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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