Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000088-TA|BGIBMGA000088-PA|IPR009617|Protein of unknown
function DUF1226
(208 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119182-1|AAM51042.1| 370|Drosophila melanogaster SD04409p pro... 77 1e-14
AL121804-4|CAB65856.1| 370|Drosophila melanogaster EG:BACR7C10.... 77 1e-14
AE014298-423|AAF45798.1| 370|Drosophila melanogaster CG9904-PA ... 77 1e-14
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 37 0.017
AY052002-1|AAK93426.1| 513|Drosophila melanogaster LD46862p pro... 33 0.37
AE014134-2346|AAF53298.1| 1906|Drosophila melanogaster CG7099-PA... 33 0.37
AF270979-1|AAG02041.1| 856|Drosophila melanogaster E23 protein. 29 4.6
AE014134-589|AAF51122.2| 634|Drosophila melanogaster CG3327-PB,... 29 4.6
AE014134-588|AAF51121.2| 854|Drosophila melanogaster CG3327-PA,... 29 4.6
AE014134-587|AAS64617.1| 1017|Drosophila melanogaster CG3327-PC,... 29 4.6
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 28 8.0
>AY119182-1|AAM51042.1| 370|Drosophila melanogaster SD04409p
protein.
Length = 370
Score = 77.4 bits (182), Expect = 1e-14
Identities = 33/73 (45%), Positives = 50/73 (68%)
Query: 1 MAPLLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGL 60
++PL + EE Q + V++F+ + ++ P+TD YVE+QS+ +Q Y LHI A FTGL
Sbjct: 184 LSPLYVLGWKEEFQQVPVEIFSRYLEERQHPITDVYVEIQSQKIQFYTVTLHIVADFTGL 243
Query: 61 RYLMYNWPKFSAL 73
RY+M+NWP SA+
Sbjct: 244 RYIMFNWPVLSAI 256
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/18 (83%), Positives = 16/18 (88%)
Query: 130 ISTNLFFITLVFALSWYH 147
ISTNLFFI +VF LSWYH
Sbjct: 259 ISTNLFFILVVFLLSWYH 276
>AL121804-4|CAB65856.1| 370|Drosophila melanogaster EG:BACR7C10.1
protein.
Length = 370
Score = 77.4 bits (182), Expect = 1e-14
Identities = 33/73 (45%), Positives = 50/73 (68%)
Query: 1 MAPLLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGL 60
++PL + EE Q + V++F+ + ++ P+TD YVE+QS+ +Q Y LHI A FTGL
Sbjct: 184 LSPLYVLGWKEEFQQVPVEIFSRYLEERQHPITDVYVEIQSQKIQFYTVTLHIVADFTGL 243
Query: 61 RYLMYNWPKFSAL 73
RY+M+NWP SA+
Sbjct: 244 RYIMFNWPVLSAI 256
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/18 (83%), Positives = 16/18 (88%)
Query: 130 ISTNLFFITLVFALSWYH 147
ISTNLFFI +VF LSWYH
Sbjct: 259 ISTNLFFILVVFLLSWYH 276
>AE014298-423|AAF45798.1| 370|Drosophila melanogaster CG9904-PA
protein.
Length = 370
Score = 77.4 bits (182), Expect = 1e-14
Identities = 33/73 (45%), Positives = 50/73 (68%)
Query: 1 MAPLLMSDVVEEKQTIQVDLFTEFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGL 60
++PL + EE Q + V++F+ + ++ P+TD YVE+QS+ +Q Y LHI A FTGL
Sbjct: 184 LSPLYVLGWKEEFQQVPVEIFSRYLEERQHPITDVYVEIQSQKIQFYTVTLHIVADFTGL 243
Query: 61 RYLMYNWPKFSAL 73
RY+M+NWP SA+
Sbjct: 244 RYIMFNWPVLSAI 256
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/18 (83%), Positives = 16/18 (88%)
Query: 130 ISTNLFFITLVFALSWYH 147
ISTNLFFI +VF LSWYH
Sbjct: 259 ISTNLFFILVVFLLSWYH 276
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 37.1 bits (82), Expect = 0.017
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 80 WKTHIDVICKRAELGLNILKSLTGVKWGADPKVLKTIYIATIRSHFDYG 128
W THI+++ + LNI+K L+ +K+ + L + ATI + +YG
Sbjct: 750 WNTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKATIIAKLEYG 798
>AY052002-1|AAK93426.1| 513|Drosophila melanogaster LD46862p
protein.
Length = 513
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 23 EFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGLR 61
E +D QPVT+ Y +Q+ YVQV+G + +F GL+
Sbjct: 469 EHEDGDEQPVTELYDPMQT-YVQVHGNAIGRLTNFIGLK 506
>AE014134-2346|AAF53298.1| 1906|Drosophila melanogaster CG7099-PA
protein.
Length = 1906
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 23 EFDDDPNQPVTDAYVELQSRYVQVYGGQLHIEAHFTGLR 61
E +D QPVT+ Y +Q+ YVQV+G + +F GL+
Sbjct: 1862 EHEDGDEQPVTELYDPMQT-YVQVHGNAIGRLTNFIGLK 1899
>AF270979-1|AAG02041.1| 856|Drosophila melanogaster E23 protein.
Length = 856
Score = 29.1 bits (62), Expect = 4.6
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 67 WPKFSALFDFDLSWKTHIDVICKRAELGLNILKSLTGVKWGAD-PKVLKTIYIATIRSHF 125
W F ALF S+ + +V+ K G L + K A+ P V+ + + S+
Sbjct: 639 WMLF-ALFGALNSFPSEREVVSKERRSGAYRLSAYYLAKMCAELPLVITLPTVYLMISYP 697
Query: 126 DYGCISTNLFFITLVFAL 143
GC S LFF+ L+F L
Sbjct: 698 MLGCTSLKLFFLMLIFLL 715
>AE014134-589|AAF51122.2| 634|Drosophila melanogaster CG3327-PB,
isoform B protein.
Length = 634
Score = 29.1 bits (62), Expect = 4.6
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 67 WPKFSALFDFDLSWKTHIDVICKRAELGLNILKSLTGVKWGAD-PKVLKTIYIATIRSHF 125
W F ALF S+ + +V+ K G L + K A+ P V+ + + S+
Sbjct: 417 WMLF-ALFGALNSFPSEREVVSKERRSGAYRLSAYYLAKMCAELPLVITLPTVYLMISYP 475
Query: 126 DYGCISTNLFFITLVFAL 143
GC S LFF+ L+F L
Sbjct: 476 MLGCTSLKLFFLMLIFLL 493
>AE014134-588|AAF51121.2| 854|Drosophila melanogaster CG3327-PA,
isoform A protein.
Length = 854
Score = 29.1 bits (62), Expect = 4.6
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 67 WPKFSALFDFDLSWKTHIDVICKRAELGLNILKSLTGVKWGAD-PKVLKTIYIATIRSHF 125
W F ALF S+ + +V+ K G L + K A+ P V+ + + S+
Sbjct: 637 WMLF-ALFGALNSFPSEREVVSKERRSGAYRLSAYYLAKMCAELPLVITLPTVYLMISYP 695
Query: 126 DYGCISTNLFFITLVFAL 143
GC S LFF+ L+F L
Sbjct: 696 MLGCTSLKLFFLMLIFLL 713
>AE014134-587|AAS64617.1| 1017|Drosophila melanogaster CG3327-PC,
isoform C protein.
Length = 1017
Score = 29.1 bits (62), Expect = 4.6
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 67 WPKFSALFDFDLSWKTHIDVICKRAELGLNILKSLTGVKWGAD-PKVLKTIYIATIRSHF 125
W F ALF S+ + +V+ K G L + K A+ P V+ + + S+
Sbjct: 800 WMLF-ALFGALNSFPSEREVVSKERRSGAYRLSAYYLAKMCAELPLVITLPTVYLMISYP 858
Query: 126 DYGCISTNLFFITLVFAL 143
GC S LFF+ L+F L
Sbjct: 859 MLGCTSLKLFFLMLIFLL 876
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 28.3 bits (60), Expect = 8.0
Identities = 19/55 (34%), Positives = 25/55 (45%)
Query: 74 FDFDLSWKTHIDVICKRAELGLNILKSLTGVKWGADPKVLKTIYIATIRSHFDYG 128
FD L +K H + K+ E NI+K L+ K L I A + S DYG
Sbjct: 753 FDPKLLFKQHCQTLRKQLETRFNIIKFLSSKYSYIHIKTLIDITRALMLSKIDYG 807
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.321 0.138 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,706,194
Number of Sequences: 52641
Number of extensions: 378213
Number of successful extensions: 517
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 509
Number of HSP's gapped (non-prelim): 14
length of query: 208
length of database: 24,830,863
effective HSP length: 82
effective length of query: 126
effective length of database: 20,514,301
effective search space: 2584801926
effective search space used: 2584801926
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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