Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000086-TA|BGIBMGA000086-PA|IPR002589|Appr-1-p processing
(244 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73102-4|CAA97408.1| 203|Caenorhabditis elegans Hypothetical pr... 165 3e-41
AC024755-10|AAF59641.1| 344|Caenorhabditis elegans Hypothetical... 36 0.027
Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical pr... 35 0.062
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ... 33 0.19
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 30 1.3
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class ho... 29 2.3
U97007-5|AAB52295.1| 564|Caenorhabditis elegans Hypothetical pr... 29 4.0
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 29 4.0
AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical ... 29 4.0
AF045644-3|AAC02602.2| 205|Caenorhabditis elegans Hypothetical ... 29 4.0
Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical pr... 28 5.3
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 28 5.3
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 28 7.1
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z46792-1|CAA86764.1| 266|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z81494-11|CAJ43905.1| 720|Caenorhabditis elegans Hypothetical p... 27 9.3
Z81494-10|CAB54212.2| 682|Caenorhabditis elegans Hypothetical p... 27 9.3
Z81057-7|CAJ43903.1| 720|Caenorhabditis elegans Hypothetical pr... 27 9.3
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 27 9.3
U42847-4|AAF23186.1| 1073|Caenorhabditis elegans Immunoglobulin-... 27 9.3
U41016-9|ABC71809.1| 105|Caenorhabditis elegans Hypothetical pr... 27 9.3
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 27 9.3
AF039041-7|AAB94189.2| 448|Caenorhabditis elegans Hypothetical ... 27 9.3
AF024498-1|AAY55835.1| 247|Caenorhabditis elegans Hypothetical ... 27 9.3
>Z73102-4|CAA97408.1| 203|Caenorhabditis elegans Hypothetical
protein B0035.3 protein.
Length = 203
Score = 165 bits (400), Expect = 3e-41
Identities = 92/179 (51%), Positives = 110/179 (61%), Gaps = 12/179 (6%)
Query: 63 FEKIKINTEKNKSISERVSIFKGDITKLEIDAVVNAANSRLKAGGGVDGAIHRAAG-PFL 121
FEK K+ K++ R+S++ GDITKL +DA+VNAANSRL GGGVDGAIHRAAG L
Sbjct: 13 FEKFKVA----KNVLGRISVWDGDITKLSVDAIVNAANSRLAGGGGVDGAIHRAAGRKQL 68
Query: 122 QAECDSIGGCPTGDAKVTGGYNL-PAKYIIHTVGPQ------DGSAEKLESCYEKCLSFQ 174
Q EC GC GDA +T G N+ K IIHTVGPQ D E L +CY L
Sbjct: 69 QEECQQYNGCAVGDAVITSGCNINHIKKIIHTVGPQVYGNVTDERRENLVACYRTSLDIA 128
Query: 175 QEYQIKSIAFPCISTGIYGFPNRLAAHIALRTARKFLETNTEMNRIIFCTFLPIDVEIY 233
E +KSIAF CISTG+YG+PN AA ++LE N + RI+ TFL ID E Y
Sbjct: 129 IENGMKSIAFCCISTGVYGYPNDDAAKTVTNFLTEYLEKNDTIERIVLVTFLDIDNEHY 187
>AC024755-10|AAF59641.1| 344|Caenorhabditis elegans Hypothetical
protein Y34B4A.2 protein.
Length = 344
Score = 35.9 bits (79), Expect = 0.027
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 4 STKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEF 63
S K +IE + KL L ++R IY+ + ID +N D K + K++G+ ++ D K
Sbjct: 70 SYKTQIEM--VQKLILAKRRIIYEVQEKIDKKNYDK-MKLVEKTEGLGTQADNNVDTK-L 125
Query: 64 EKIKINTEKNKSISERVSIFKG---DITKLEID 93
+ IKI N+ ++ R + D+ K++ID
Sbjct: 126 KNIKITRIMNRLVAYRKTFLLQEIMDVFKIDID 158
>Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical
protein T24H10.3 protein.
Length = 242
Score = 34.7 bits (76), Expect = 0.062
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 4 STKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEF 63
+TK+++ LS EEKRKIY + +D + ++ K+ + KK T +D+ F
Sbjct: 57 TTKFQLLNKAYQILSDEEKRKIYDETGSVD-DEAGELNEDALKAWRMIFKKVTKEDIDSF 115
Query: 64 EK-IKINTEKNKSISERVSIFKGDITKLEIDAV 95
K + + E+ + F GDI K+ A+
Sbjct: 116 MKTYQGSREQKDELVVHYEKFNGDIAKIREYAI 148
>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
protein R155.3 protein.
Length = 1165
Score = 33.1 bits (72), Expect = 0.19
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 17/93 (18%)
Query: 41 SKYLNKSQGIDSKKSTTDDLKEFEKIKINTE----KNKSIS--ERVSIFK-----GDITK 89
+ Y+N + +K + TD LK+FEKI +++ + IS +++ FK GD+ K
Sbjct: 433 TSYINSVK--KTKHAETDALKDFEKIGLHSRVIGTATRGISNMQKLVDFKDLADIGDLVK 490
Query: 90 LEIDAVVNAAN----SRLKAGGGVDGAIHRAAG 118
E++ V + N + LKA G++G + A+G
Sbjct: 491 SEVEKVKDQLNDENVANLKALAGIEGQLKTASG 523
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 47 SQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDI-TKLEID 93
+ GI +++ TD L+E E+I+ E+ K +E + I K + TK E+D
Sbjct: 1663 ASGIATREENTDVLEEEERIQKRVEEFKKTTENLEIQKEVVLTKEEVD 1710
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 47 SQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDI-TKLEID 93
+ GI +++ TD L+E E+I+ E+ K +E + I K + TK E D
Sbjct: 2026 ASGIATREKNTDVLEEEERIQKRVEEFKKTTENLEIQKEVVLTKEEGD 2073
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 47 SQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDI-TKLEID 93
+ GI +++ TD L+E E+I+ E+ K +E + I K + TK E+D
Sbjct: 1663 ASGIATREENTDVLEEEERIQKRVEEFKKTTENLEIQKEVVLTKEEVD 1710
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 47 SQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDI-TKLEID 93
+ GI +++ TD L+E E+I+ E+ K +E + I K + TK E D
Sbjct: 2026 ASGIATREKNTDVLEEEERIQKRVEEFKKTTENLEIQKEVVLTKEEGD 2073
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 2 VNSTKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLK 61
+N E+ LK L+E + K+ +F + V S +K G KK+ D +
Sbjct: 142 INHLTISSEETAYLKRELQESKNRLKTCEFYKILTVH--SSEADKQLGEYLKKNGNLDTE 199
Query: 62 EFEKIKINTEKNKSISERVSIFKGDITKLEIDAVVNAA 99
+F ++ +T K+ + R + + + K+E+ ++ AA
Sbjct: 200 KFFQLMKSTNKDLTDKRREAAKEIEQLKMEVQSLKRAA 237
>Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical
protein F55B12.1 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 42 KYLNKSQGIDSKKSTTDDLKEFEKIKINTEK 72
K N+ GID +KS+ DD + K+K N K
Sbjct: 15 KEKNEETGIDEEKSSEDDCSKRSKVKSNPSK 45
>Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical
protein T28C6.7 protein.
Length = 459
Score = 29.5 bits (63), Expect = 2.3
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Query: 3 NSTKWEIEKNRILKLSLEE-KRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLK 61
+S WEIE+N +L+ + K K++K + +D V S + + +DL
Sbjct: 293 SSRNWEIEQNALLRDQVAHLKEKVHKLTTELDASEVAKRSLSSEVDESKKLMELMVEDLL 352
Query: 62 EFEK-IKINTEKNKSISERVSIFKGDI 87
+ E I N + K+I E + K I
Sbjct: 353 QAESAINYNQCQKKAIFEDIDRLKDAI 379
>AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class
homeodomain protein protein.
Length = 298
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 42 KYLNKSQGIDSKKSTTDDLKEFEKIKINTEK 72
K N+ GID +KS+ DD + K+K N K
Sbjct: 15 KEKNEETGIDEEKSSEDDCSKRSKVKSNPSK 45
>U97007-5|AAB52295.1| 564|Caenorhabditis elegans Hypothetical
protein ZC196.5 protein.
Length = 564
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 15 LKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNK 74
++++ + K K K++ +D D W Y S + D L+E K+K ++
Sbjct: 271 MEITKQRKSKAVKNNQELD----DDWGAYTTSSNAEEKISKKCDSLQEPVKLKRTESESS 326
Query: 75 SISE 78
SI+E
Sbjct: 327 SITE 330
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical
protein F42C5.10 protein.
Length = 1292
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 25 IYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISE 78
+Y +D +D+ +V P N + + +KS TD ++E E+ E+ + + E
Sbjct: 630 LYIGNDALDV-SVSPHFNQSNDQKNLGLEKSVTDRVREMERAMRGEERERLLEE 682
>AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical
protein Y106G6D.3 protein.
Length = 555
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 3 NSTKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKE 62
+ +K +I K++ + S +EK Y FI P Y ++ + + KKS D+ +E
Sbjct: 140 DDSKRKISKDKNSRRSSQEKSHKYSEPLFI------PPVDYDDRDRSLKKKKSVRDNNEE 193
Query: 63 FEKIKINTEKNKSISERVSIFKGDITK 89
+ + +K+K + E+ K D ++
Sbjct: 194 GSRRSSSRDKSKDMKEKSQQSKKDSSR 220
>AF045644-3|AAC02602.2| 205|Caenorhabditis elegans Hypothetical
protein F57H12.6 protein.
Length = 205
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 39 PWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEK-NKSISER 79
PWS+ K + + K+ D+LK+F++ K EK +K E+
Sbjct: 108 PWSEKPEKIEALAEKELDGDNLKKFKEFKEKKEKEDKEYKEK 149
>Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical
protein C06C3.3 protein.
Length = 576
Score = 28.3 bits (60), Expect = 5.3
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 8 EIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKI- 66
+IEK KLS +K + KS + + D + L + + I+ K EK+
Sbjct: 397 KIEKKVPEKLSKPQKTETTKSKE--RAKWADQGNTTLKREKSIEKSTRQGKIDKSIEKLI 454
Query: 67 --KI-NTEKNKSISERVSIFKGDITKLEID 93
I NTEK S ++ + KG++ K ++D
Sbjct: 455 DKSIDNTEKLSSQKPKIDMAKGELRKFDVD 484
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 117 AGPFLQAECDSIGGCPTGDAKVTGGYNLP 145
AGP +Q + GG P KVT G N+P
Sbjct: 1126 AGPMIQQGKNIAGGYPPNQNKVTPGKNVP 1154
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 9 IEKNRILKLSLEEKRKIYKSSDFI--DLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKI 66
+EK R L+ E +K+ ++ + D++ ++ K + + + I KK + + E E+
Sbjct: 771 VEKTRSLEEQEERSKKLRAETELLRKDMQELETDKKTVKEFE-IKYKK--LESIFETERE 827
Query: 67 KINTEKNKSISERVSIFK 84
K+N E+N+S +E ++ K
Sbjct: 828 KMNGERNRSKNELAAMKK 845
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 62 EFEKIKINTEKNKSISERVSIFKGDITKLEIDAVVNAANSRLKAGGGVDGAIH 114
+ K++ N EK+K + + + + +EIDA+ +SR++ + A+H
Sbjct: 954 QLAKVQANWEKDKEVFQHKTRKSEKLRTVEIDAMQQKFSSRMRIMEDTNKALH 1006
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 9 IEKNRILKLSLEEKRKIYKSSDFI--DLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKI 66
+EK R L+ E +K+ ++ + D++ ++ K + + + I KK + + E E+
Sbjct: 771 VEKTRSLEEQEERSKKLRAETELLRKDMQELETDKKTVKEFE-IKYKK--LESIFETERE 827
Query: 67 KINTEKNKSISERVSIFK 84
K+N E+N+S +E ++ K
Sbjct: 828 KMNGERNRSKNELAAMKK 845
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 62 EFEKIKINTEKNKSISERVSIFKGDITKLEIDAVVNAANSRLKAGGGVDGAIH 114
+ K++ N EK+K + + + + +EIDA+ +SR++ + A+H
Sbjct: 954 QLAKVQANWEKDKEVFQHKTRKSEKLRTVEIDAMQQKFSSRMRIMEDTNKALH 1006
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 9 IEKNRILKLSLEEKRKIYKSSDFI--DLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKI 66
+EK R L+ E +K+ ++ + D++ ++ K + + + I KK + + E E+
Sbjct: 771 VEKTRSLEEQEERSKKLRAETELLRKDMQELETDKKTVKEFE-IKYKK--LESIFETERE 827
Query: 67 KINTEKNKSISERVSIFK 84
K+N E+N+S +E ++ K
Sbjct: 828 KMNGERNRSKNELAAMKK 845
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 62 EFEKIKINTEKNKSISERVSIFKGDITKLEIDAVVNAANSRLKAGGGVDGAIH 114
+ K++ N EK+K + + + + +EIDA+ +SR++ + A+H
Sbjct: 954 QLAKVQANWEKDKEVFQHKTRKSEKLRTVEIDAMQQKFSSRMRIMEDTNKALH 1006
>Z46792-1|CAA86764.1| 266|Caenorhabditis elegans Hypothetical
protein C52A11.2 protein.
Length = 266
Score = 27.9 bits (59), Expect = 7.1
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 20 EEKRKIYKSSDFIDLENVDPWSKYLNK--SQGIDS-------KKS--TTDDLKEFEKIKI 68
+E +K+ + ++ + D W K+LN SQ DS +KS TT L + I+I
Sbjct: 172 KENKKVRFAQNYTTSQITDVWKKFLNTVISQMTDSFELERAKQKSAQTTKALAPHQHIEI 231
Query: 69 NTEKNKSISERVS 81
+ K K ++E+ S
Sbjct: 232 SERKKKRVAEKQS 244
>Z81494-11|CAJ43905.1| 720|Caenorhabditis elegans Hypothetical
protein F02E9.9b protein.
Length = 720
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 27 KSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGD 86
K F NV+ W+ L K G D K + T IK+ + + +SE V F+GD
Sbjct: 221 KIDRFFKQRNVESWNSRLFKEVGSDGKTTYT--------IKLASSEEGIVSEAVE-FEGD 271
Query: 87 ITKL 90
+ ++
Sbjct: 272 VVQI 275
>Z81494-10|CAB54212.2| 682|Caenorhabditis elegans Hypothetical
protein F02E9.9a protein.
Length = 682
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 27 KSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGD 86
K F NV+ W+ L K G D K + T IK+ + + +SE V F+GD
Sbjct: 183 KIDRFFKQRNVESWNSRLFKEVGSDGKTTYT--------IKLASSEEGIVSEAVE-FEGD 233
Query: 87 ITKL 90
+ ++
Sbjct: 234 VVQI 237
>Z81057-7|CAJ43903.1| 720|Caenorhabditis elegans Hypothetical
protein F02E9.9b protein.
Length = 720
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 27 KSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGD 86
K F NV+ W+ L K G D K + T IK+ + + +SE V F+GD
Sbjct: 221 KIDRFFKQRNVESWNSRLFKEVGSDGKTTYT--------IKLASSEEGIVSEAVE-FEGD 271
Query: 87 ITKL 90
+ ++
Sbjct: 272 VVQI 275
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 27.5 bits (58), Expect = 9.3
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 20 EEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISE 78
++K K K D D EN D K +K + D K+ DD +E +K K + +KN E
Sbjct: 217 KKKDKKKKKDDKDDDENEDDKKK--DKKKKKDDKEKDDDDEEEKDKKKKDKKKNDDDEE 273
>U42847-4|AAF23186.1| 1073|Caenorhabditis elegans
Immunoglobulin-like cell adhesionmolecule family protein
1 protein.
Length = 1073
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 118 GPFLQAECDSIGGCPTGDAKVTGGYNLPAKYIIHTVGPQDGSAEKL 163
G F+ A+C S+GG P T + A I T +DG+ E L
Sbjct: 159 GDFMTAKCVSVGGSPQPTFTWTLPNDTIASSAIFTTQFRDGATESL 204
>U41016-9|ABC71809.1| 105|Caenorhabditis elegans Hypothetical
protein R11G1.7 protein.
Length = 105
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 47 SQGIDSKKSTTDDLKEFEKIKINTEK 72
++ D+KK+ D +K EK+ +NT+K
Sbjct: 54 AKNTDAKKNVDDPVKPVEKVTLNTKK 79
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 1 MVNSTKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSK 53
M+ W E + LK L E + + D N++ W +Y N+ + ++K
Sbjct: 125 MLEQEHWSSETS--LKKLLREISNLLATPDLTQAANIEAWMEYENQRENYEAK 175
>AF039041-7|AAB94189.2| 448|Caenorhabditis elegans Hypothetical
protein W03F8.2 protein.
Length = 448
Score = 27.5 bits (58), Expect = 9.3
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 31 FIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNKSISERVSIFKGDITKL 90
F ++ N D W ++ +K+ DD KE E+ K E K + +V + +
Sbjct: 67 FSEIINFDLWFFFIKYGSSEPTKQEKEDDKKEVEEKK---ENEKPVDVKVE----EKVMV 119
Query: 91 EIDAVVNAANSR-LKA 105
+++A N NS+ LKA
Sbjct: 120 KVEATQNTDNSQELKA 135
>AF024498-1|AAY55835.1| 247|Caenorhabditis elegans Hypothetical
protein F40H7.12 protein.
Length = 247
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 93 DAVVNAANSRLKAGGG-VDGAIHRAAGPFLQAECDSIGGCPTGDAKVTGG 141
D VV + GGG + G IH AAG + A ++ G T V GG
Sbjct: 8 DGVVTKIVEGVVPGGGLITGPIHAAAGNPIHAAQAAVAGFGTLAGAVVGG 57
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.135 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,122,286
Number of Sequences: 27539
Number of extensions: 263521
Number of successful extensions: 889
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 871
Number of HSP's gapped (non-prelim): 36
length of query: 244
length of database: 12,573,161
effective HSP length: 79
effective length of query: 165
effective length of database: 10,397,580
effective search space: 1715600700
effective search space used: 1715600700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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